View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0.88 | 0.75 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.62 | 0.0 | 0.69 | 0.0 | 0.09 | 0.21 | 0.22 | 0.14 | 0.0 | 0.0 | 0.0 | 1.61 | 4.5 | 1.61 | 4.08 | 1.26 | 4.73 | 4.7 | 1.61 | 1.18 | 4.66 | 2.86 | 3.19 | 18.0 | 20.39 | 22.27 | 21.02 | 16.26 | 5.47 | 12.97 | 25.76 | 15.46 | 12.47 | 29.3 | 8.51 | 0.05 | 0.03 | 0.11 | 1.96 | 4.42 | 0.6 | 0.77 | 1.38 | 2.09 | 2.45 | 0.76 | 0.81 | 4.57 | 0.15 | |
0.11 | 0.0 | 0.0 | 0.0 | 0.03 | 0.21 | 0.0 | 0.17 | 0.19 | 0.21 | 0.02 | 0.01 | 0.03 | 0.0 | 0.01 | 0.0 | 0.0 | 0.0 | 0.25 | 0.09 | 0.64 | 0.22 | 0.65 | 0.05 | 0.16 | 0.12 | 0.09 | 0.13 | 0.12 | 0.17 | 0.81 | 0.73 | 0.84 | 0.92 | 0.8 | 0.2 | 0.37 | 1.28 | 0.84 | 0.64 | 1.03 | 0.34 | 0.39 | 0.33 | 0.05 | 0.25 | 0.51 | 0.05 | 0.09 | 0.08 | 0.15 | 0.27 | 0.03 | 0.05 | 0.26 | 0.02 | |
0.5 | 0.93 | 0.0 | 0.04 | 0.0 | 0.0 | 0.0 | 3.33 | 2.68 | 1.03 | 0.0 | 0.03 | 0.07 | 0.02 | 0.35 | 0.0 | 0.0 | 0.0 | 2.64 | 0.67 | 6.33 | 1.75 | 4.48 | 0.72 | 0.11 | 1.54 | 0.12 | 0.17 | 0.05 | 0.05 | 41.36 | 52.78 | 47.25 | 45.24 | 34.24 | 10.48 | 30.72 | 56.91 | 38.67 | 33.94 | 70.75 | 17.33 | 3.56 | 1.64 | 6.73 | 5.27 | 3.87 | 3.02 | 2.93 | 1.96 | 2.44 | 2.53 | 1.72 | 1.13 | 4.37 | 0.02 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)