Heatmap: Cluster_67 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
- - - - 5.45 - - - - - - - - - - - - - - - - - - - - - -2.44 - - - - - - - - - - - - - - - - -
AT1G12260 (VND4)
-0.19 0.5 0.02 -3.16 4.7 -2.29 -2.42 -3.24 -5.12 -8.78 -5.92 - - -0.14 -3.35 -1.36 -2.86 -4.74 -2.08 -1.82 -1.37 1.25 -1.17 -0.54 -1.56 -2.63 -2.22 -2.42 0.7 0.88 -1.46 - -1.53 - -5.9 -7.08 -8.53 - -3.18 -1.28 -1.97 -0.11 -0.5 -0.7
AT1G20850 (XCP2)
0.09 0.9 -0.42 -7.44 4.63 -4.42 -1.01 -2.56 -5.06 -8.95 -5.88 -3.7 - 1.04 -2.43 -0.53 -2.37 -4.38 -1.16 -0.79 -1.7 0.18 -0.63 0.16 -0.47 -6.55 -2.52 -3.28 -0.03 - -0.59 -10.91 -0.23 -7.64 - -6.63 -10.71 -9.9 -3.81 -1.19 -1.23 -0.25 -0.04 -0.01
-1.34 1.5 0.55 -0.62 5.07 -1.27 - -5.45 -4.91 -8.05 -7.01 - - -6.28 -3.91 -7.21 -8.92 - - - -4.82 -3.69 - -2.43 -0.59 -2.47 -5.85 -3.5 -2.1 - -4.16 - -4.73 -8.21 -5.14 0.85 - - -4.69 -1.74 -3.04 -5.31 -2.83 -0.84
- - - - 5.24 -3.6 - -5.47 -5.43 -2.81 - - - -1.08 0.63 - - - -2.78 -4.23 -5.28 - -4.94 -3.97 - -3.85 -3.5 - - - -8.93 - -5.82 - 1.31 -0.35 - - -3.94 -5.94 - - -4.04 -3.59
0.28 0.18 0.44 0.85 4.99 0.29 -5.2 -4.6 -5.48 -6.13 -5.9 - - -1.91 -1.22 -3.03 -4.26 -3.99 -2.43 -5.74 -4.9 -6.02 -4.35 -5.14 -5.21 -7.67 -3.72 -2.73 -2.63 -6.89 -1.94 -4.24 -1.4 -0.32 -0.53 -8.07 -7.52 - -3.37 -1.6 -2.11 -5.06 -2.02 -0.91
-0.31 -3.77 -0.52 -1.2 5.17 -1.27 -4.08 -3.04 - - - -9.6 - -0.24 -3.75 -3.72 -4.48 -5.8 -0.46 -0.94 -4.29 -4.75 -9.64 -6.99 -8.06 -7.75 -3.28 -3.62 -0.79 - -2.95 - -3.79 - -2.07 -2.13 - - -5.01 -2.27 -2.93 -8.7 -1.44 -0.27
-0.81 -0.7 -1.8 -4.68 5.32 -4.3 -5.73 -4.37 -7.52 -9.35 -8.03 - - -1.98 -5.24 -4.35 -5.36 -6.09 -2.86 -3.42 -4.32 -4.73 -3.12 -2.22 -1.34 -6.6 -3.55 -5.65 -8.5 - -2.38 -7.98 -2.15 -8.37 - -7.15 - - -7.74 -3.01 -3.06 -5.77 -3.03 -2.9
AT1G62700 (VND5)
-0.05 0.01 -0.45 -1.77 4.61 -1.63 -2.42 -2.06 -2.75 -5.47 -4.0 - - 1.72 -1.36 -0.73 -1.99 -1.68 0.08 -0.12 0.39 0.07 -1.82 -2.22 -2.32 -4.66 -0.35 -1.02 -0.58 - -1.51 - -1.51 - -0.94 -6.2 - -4.05 -2.8 -1.87 -2.14 -1.29 -0.38 -0.89
-0.57 -0.12 -0.52 -3.79 5.13 -3.62 -2.67 -5.69 -8.88 -8.7 - - - 0.71 -4.73 -1.94 -3.54 -5.36 -0.97 -1.6 -1.91 -2.6 -2.66 -2.85 -2.8 -5.43 -2.77 -3.25 -0.71 - -1.95 -7.17 -2.45 - -5.21 -4.04 - - -4.16 -2.37 -4.51 -2.64 -1.28 -2.05
-0.86 -0.97 -0.3 -1.99 4.96 -2.02 -2.39 -2.79 -3.22 -4.17 -4.06 -7.55 - 0.71 -3.46 -0.64 -1.34 -1.29 -0.19 -1.25 -0.63 -1.65 -1.77 -4.59 -5.34 -3.82 -0.93 -1.24 -2.29 - -1.4 -7.04 -1.84 -6.93 -1.83 -3.82 - -10.15 -1.74 -1.82 -1.65 -2.23 -1.2 -1.32
- - - - 5.38 - -0.11 - - - - - - - - - - - - - - - - 0.2 - - - - - - -4.75 - - - - - - - - - - - - -1.38
AT1G71930 (VND7)
-1.7 -0.85 -1.59 -4.05 5.3 -4.18 -2.99 -5.49 -7.73 -10.12 -9.03 -5.04 - -1.69 -1.84 -2.34 -5.03 -7.13 -3.41 -3.15 -2.86 -3.16 -3.32 -2.23 -2.99 -8.34 -4.25 -5.11 -2.25 - -3.22 - -3.17 - -4.82 -7.13 - - -5.88 -3.84 -4.27 -2.8 -2.14 -2.28
-2.74 -4.03 -5.01 -8.54 4.96 -8.52 -2.84 -2.47 -1.15 -0.91 -1.19 -5.79 -2.4 -2.62 -0.78 -3.04 -4.06 -5.7 -5.67 -4.91 -0.51 -2.3 -1.5 -2.89 -1.96 -0.86 -5.71 -5.58 -7.0 -7.81 -1.34 -1.48 -0.72 2.27 -6.84 -2.3 -4.91 -6.29 -5.44 -2.21 -3.5 -2.26 -2.86 -2.29
0.55 - 1.96 -0.09 5.19 -0.21 - - - - - - - - - - - - - - -4.74 - - - - - - - - - -6.63 - - - -3.88 - - - - -4.67 -3.94 - -4.3 -5.82
-0.13 0.98 0.45 -5.53 4.59 -3.36 -1.1 -2.97 -2.12 -1.91 -2.18 -5.16 - 2.21 -1.59 -1.77 -2.99 -4.42 -1.1 -0.85 -1.02 -1.02 -2.26 -2.38 -2.56 -7.03 -2.45 -2.79 -0.49 - 0.62 -7.33 0.4 -4.12 -6.95 -4.36 -7.58 - -4.07 -2.05 -1.79 -1.36 -0.87 -0.71
-0.7 -0.1 0.32 -1.3 4.64 -1.04 -0.75 -3.07 -2.85 -3.76 -3.6 -6.58 - 1.02 -2.06 -0.76 -1.42 -1.75 -0.56 -0.77 -0.95 -1.57 -1.56 -2.41 -2.19 -4.07 -1.04 -1.32 -0.29 - -0.5 -4.3 -0.49 -4.8 -1.9 0.85 -4.48 -4.46 -1.79 -1.76 -0.88 -1.95 -0.77 -0.91
0.72 1.56 0.04 -3.65 4.38 -3.01 -1.74 -4.07 -7.02 - -7.31 - - 1.44 -4.29 -1.18 -2.74 -3.07 0.52 -0.16 -1.56 0.44 -0.38 -0.08 -0.72 -0.77 -1.36 -1.46 0.52 - -0.22 -9.25 -0.48 -9.18 - -3.79 -9.5 - -1.84 -0.36 -2.12 -1.5 -1.21 -0.51
- - - - 5.36 -3.22 - - - - - 0.88 - - -2.36 - - - - - - - - - - -2.47 -5.26 - -0.71 - -3.55 - - - - - - - - - - - - -
-1.45 -3.8 0.47 -0.8 5.01 -0.47 -0.89 -2.69 -5.4 -6.94 -6.01 -3.98 - -1.73 -3.72 -2.02 -2.45 -2.74 -2.52 -2.04 -1.43 -2.02 -1.24 -4.36 -5.28 -3.39 -2.09 -1.85 -5.23 - -3.03 - -2.67 -7.4 -1.39 -3.93 - -9.03 -3.11 -1.05 0.43 -0.03 -0.32 -1.51
-0.27 1.42 0.35 -5.86 4.98 -3.52 -1.57 -5.46 -8.22 -9.12 -9.09 - - 1.14 -3.45 -0.66 -2.48 -3.55 -1.65 -1.66 -2.86 -3.41 -2.44 -2.85 -2.63 -4.8 -2.91 -3.73 -1.08 -3.13 -1.89 - -2.42 - -5.69 -7.48 - - -6.02 -1.6 -2.64 -3.86 -1.67 -1.18
-1.67 0.71 -0.43 -2.34 4.65 -2.74 - -3.1 -0.65 -0.04 -0.89 - - -0.91 0.95 - -3.27 -3.36 -1.72 -3.23 -1.65 -3.88 -4.89 -1.7 -3.36 0.34 -0.45 -1.1 -3.59 - -2.29 -1.31 -2.41 -5.06 0.6 -2.61 0.26 0.43 -1.2 -2.42 -4.12 -2.34 -3.17 0.07
AT3G08500 (MYB83)
-1.01 1.0 -0.03 - 4.7 -5.01 -1.48 -7.55 -6.09 - - - - 1.63 -4.88 -0.65 -3.09 -3.85 -0.4 -0.49 -1.74 -0.41 -1.78 -1.3 -1.35 -7.3 -2.13 -1.09 0.03 - 0.11 - 0.24 - - - - - -3.01 -1.28 -2.94 -0.45 -1.22 -0.65
-0.38 0.38 -0.31 -2.25 4.51 -2.13 -1.15 -2.52 -4.49 - -5.27 -2.52 - 1.27 -3.34 -0.54 -3.26 -3.41 -0.64 -0.86 -0.53 0.2 -0.64 0.08 -1.14 -5.57 -1.84 -1.93 0.53 - 0.26 -7.37 0.56 -5.11 - -3.6 -6.17 - -2.36 -1.43 -2.09 -0.21 0.31 -0.6
-0.12 0.19 -2.68 -0.72 5.29 -2.81 - - - - - - - -7.2 - -10.42 -7.97 -8.12 -7.2 -8.18 -9.21 - - -8.39 - - -9.97 - -5.66 - -7.63 -2.73 -10.24 -7.11 -4.04 -3.35 0.02 -4.06 - -3.27 -3.49 -6.21 -2.48 -2.85
-0.25 -0.44 -0.39 -2.32 4.57 -1.78 -1.99 -3.64 -7.87 -7.65 -7.87 - - 0.85 -3.75 0.01 -0.39 -0.91 -0.14 -0.18 0.41 -0.8 -0.5 0.08 0.22 -3.66 -0.98 -0.24 -0.35 - -1.08 -5.44 -0.96 -3.21 - -3.66 - - -0.11 -1.07 -1.61 -5.23 -1.26 -0.65
AT3G22830 (HSFA6B)
-5.09 0.76 -1.94 -4.63 5.35 -5.19 -8.55 -12.32 -11.28 - -11.25 -4.35 -6.63 -7.3 -2.87 -4.56 -4.64 -4.94 -7.0 -7.26 -5.61 -8.6 -7.49 -5.21 -5.34 -8.89 -5.23 -7.46 -8.69 - -3.58 -6.06 -3.18 -4.15 -2.6 -4.0 -9.1 - -6.11 -3.41 -6.69 -7.64 -7.3 -4.39
-1.15 -6.35 -0.79 -0.27 5.28 -0.91 -7.72 -3.21 -6.69 - -9.29 - - -2.43 - -7.21 -5.91 -7.28 -3.68 -3.28 -8.43 -3.8 -7.86 -4.07 -2.45 - -8.46 -9.22 - - -4.66 - -6.13 - -2.48 -5.83 -9.69 - -9.27 -3.46 -1.79 -2.4 -1.65 -0.69
-1.11 -1.78 -1.17 -1.59 5.35 -1.06 -4.26 -7.57 -11.05 - - - - -3.16 -10.28 -3.91 -5.64 -7.59 -4.1 -3.61 -5.44 -5.0 -4.83 -4.37 -4.53 -8.65 -5.24 -5.17 -3.14 - -4.74 - -5.54 - - -11.14 - - -7.48 -3.24 -3.8 -6.81 -3.31 -2.73
AT3G55990 (ESK1)
0.09 1.71 -0.03 -3.81 4.54 -3.44 -1.79 -4.92 -7.15 -9.97 -7.77 -7.41 -9.46 2.51 -3.58 -2.55 -3.8 -5.47 -2.09 -1.9 -2.98 -1.73 -1.89 -1.65 -1.6 -2.2 -3.4 -3.04 -0.62 - 0.94 -7.44 1.19 -4.29 -7.69 -3.7 - - -4.51 -1.78 -2.4 -2.4 -1.56 -0.75
1.55 -2.85 0.83 2.28 4.89 1.72 - -7.62 - -8.03 - - - - - - - - -4.69 - - - - - - -6.5 -9.48 - - - - - - - -5.15 - -7.78 - - -0.62 -2.72 - -2.66 -1.71
0.33 -1.29 0.92 -0.4 4.9 -0.37 -3.12 -2.71 -4.67 -6.69 -6.6 - - -0.38 -1.53 -0.27 -0.02 -1.65 -0.49 -1.56 -1.17 -2.36 -4.31 -6.16 -5.31 -4.24 -1.03 -4.97 -6.23 - -4.38 -6.19 -4.83 -6.12 -0.56 -2.21 - - -5.57 -1.51 -1.85 -1.52 -0.74 -1.29
1.1 2.08 2.27 -2.08 4.93 -0.47 -8.79 -8.37 -6.6 -8.04 -7.04 - - -7.32 -6.67 - - - -8.28 - - -5.96 - - - -5.14 -8.93 - -9.57 -9.24 -10.8 - -11.4 -9.46 -6.83 -9.33 -8.78 -8.29 - -3.26 -2.63 - -2.25 -0.38
AT4G14940 (AO1)
0.48 0.44 0.19 -2.44 5.11 -0.28 -2.19 -6.95 - - -10.26 -5.77 -6.68 -0.15 -5.94 -3.53 -4.2 -7.19 -2.99 -1.93 -3.25 -2.24 -4.31 -4.77 -5.48 -2.56 -3.38 -6.35 -2.53 - -2.92 -8.75 -3.66 -5.9 -8.5 -4.66 -9.13 - -6.06 -1.63 -1.5 -2.12 -1.94 -0.78
-5.53 - -4.69 - 5.32 -6.34 - - - - -7.39 - - -2.76 -3.02 - - - - - - - - -4.71 - -0.34 -5.72 - - -5.51 - - - - - 1.52 - - -7.13 - - - - -5.91
AT4G26890 (MAPKKK16)
0.36 -0.18 -0.66 -3.23 5.16 -1.97 -6.94 -2.74 -3.09 -3.27 -2.83 - -3.42 -3.15 -4.27 -6.35 -7.64 -6.47 -4.32 -3.95 -3.68 -3.22 -3.48 -0.89 -1.18 -6.03 -2.53 -0.94 - - -2.52 -7.28 -2.79 -6.08 -3.73 -0.95 -6.94 - -1.98 -2.66 -3.66 -7.07 -2.36 -1.04
AT4G35350 (XCP1)
0.57 1.0 -0.01 -6.72 4.97 -4.12 -1.86 -4.34 -8.0 -9.66 -7.43 -11.45 - -0.03 -4.07 -1.89 -3.59 -5.9 -1.74 -1.73 -2.65 -0.57 -1.62 -0.92 -1.35 -9.12 -3.75 -5.07 -0.56 -9.88 -1.94 - -1.96 -7.85 -9.8 -7.21 -6.73 -8.74 -5.08 -1.55 -2.46 -0.8 -1.25 -0.14
AT4G36160 (VND2)
-2.81 -1.46 -1.3 -3.99 5.24 -3.27 -3.47 -4.2 -6.23 -7.83 -9.54 -2.35 - -1.27 -4.13 -3.02 -4.6 -3.9 -1.62 -1.89 -2.25 -1.41 -2.09 -3.62 -4.35 -5.15 -2.06 -2.35 -0.04 - -2.79 - -3.09 -9.03 -4.14 -8.97 - - -3.64 -3.35 -4.05 -2.99 -2.48 -3.13
-2.17 -1.92 -3.22 -3.68 5.3 -4.54 -4.71 -7.94 - - -8.06 - - -1.44 -5.28 -3.57 -3.93 -2.89 -2.05 -2.68 -2.89 -5.23 -1.81 -4.32 -3.47 -5.12 -2.37 -1.8 0.0 - -2.55 - -2.87 - - -7.27 - - -3.55 -2.98 -6.28 - -5.51 -3.94
-1.03 -0.97 -0.16 -1.87 5.28 -2.31 -4.32 - -9.18 -9.0 -8.84 - - -0.3 -6.28 -3.48 -4.62 -4.71 -2.84 -3.14 -3.12 -3.52 -4.4 -3.59 -3.43 -6.62 -3.92 -2.93 -5.19 - -3.27 - -4.21 - -4.39 -3.49 - - -3.73 -3.05 -4.14 -4.94 -4.11 -3.89
-0.65 -0.13 -0.08 -1.34 5.11 -1.55 -3.53 -4.22 -3.45 -4.78 -5.0 - - 0.58 0.64 -5.24 -6.28 -7.05 -4.21 -3.6 -3.4 -3.97 -4.6 -5.6 -4.75 -8.45 -5.1 -5.74 -3.27 - -0.69 -7.41 -0.78 -5.52 -4.7 -5.71 -4.01 - -6.31 -3.09 -2.54 -5.75 -2.24 -1.65
-2.17 -1.76 -0.81 -3.33 5.21 -1.96 -5.18 -8.79 -4.32 -4.85 -5.21 -3.68 -1.97 -1.31 -1.03 -3.38 -3.57 -3.84 -2.88 -5.57 -1.9 -5.69 -3.14 -2.49 -1.18 -3.27 -2.83 -4.72 -2.7 -4.58 -2.5 -6.8 -2.69 - -0.6 -1.36 - - -1.93 -4.58 -3.93 -4.14 -3.27 -1.62
AT5G23860 (TUB8)
-0.01 -1.9 -0.02 -1.46 4.7 -0.58 -2.38 -2.64 -3.34 -3.87 -4.09 -5.76 -9.22 0.84 -4.49 -2.16 -1.85 -1.38 -0.54 -1.03 -2.01 -0.83 -2.18 0.26 1.1 -3.39 -1.1 -1.44 -3.1 -10.08 -0.01 -7.41 0.19 -5.88 -2.18 -2.71 -9.35 -9.09 -1.7 -2.07 -1.37 -2.06 -1.6 -0.43
-0.34 1.38 -0.0 -9.13 4.78 -2.94 -1.16 -4.15 -5.73 -6.58 -6.38 -6.68 - 2.08 -2.46 -1.25 -2.56 -3.88 -1.89 -1.19 -2.35 -3.36 -1.21 -1.06 -0.87 -6.56 -2.62 -3.17 -0.07 - -1.19 - -1.48 -5.7 - -4.11 - -10.37 -4.56 -1.6 -1.36 -2.91 -1.58 -0.99
- -2.27 -3.28 -2.56 5.33 - - - - - - -0.11 - - -3.04 - -6.26 -5.51 - - -2.99 - - - - - -2.54 - - - - -3.23 - -3.05 -0.66 -2.17 -0.61 - -5.52 - - - -1.81 -
-2.51 0.54 -4.98 - 5.37 - - - - - - -3.1 - - - - - - - - - - - - - -5.49 -8.18 - - - -7.74 - - - -2.75 -1.21 - - -6.27 -3.8 - - -5.17 -5.85
-0.08 0.45 -0.6 -6.08 4.77 -3.47 -2.14 -4.63 -6.58 - - -3.39 - 1.59 -3.55 -2.4 -3.7 -4.48 -1.58 -1.54 -2.38 -1.53 -1.93 -1.47 -2.31 -6.34 -3.09 -2.19 -1.02 - 0.96 -6.74 1.58 -3.52 -6.49 -3.29 - - -3.82 -1.4 -3.42 -2.66 -0.5 -1.01
1.67 - - - 5.17 - - - - - - - - 1.45 -2.2 -1.32 -1.46 -4.49 -1.55 - -4.39 - - - - - -5.0 - - - - - - - -3.02 - - - - - -4.2 - -1.7 -4.83
-0.34 -0.02 0.1 -1.4 4.65 -1.5 -2.07 -3.92 -5.3 -6.18 -5.74 - - 0.9 -2.88 -0.55 -0.47 -0.8 -0.21 -0.11 -0.21 -0.12 -1.04 -0.37 1.02 -3.86 -1.58 -0.55 -3.57 - -1.73 - -1.68 -5.08 -4.93 -4.68 -7.15 - -1.02 -1.71 -1.66 -2.52 -2.07 -0.62
-0.88 -0.94 -1.39 -0.63 5.08 -1.86 - -3.89 -2.48 -3.83 -3.14 -0.4 -6.28 -0.05 0.86 -2.06 -1.9 -2.29 -2.94 -4.75 -4.53 -5.64 -6.67 -5.79 -4.77 -6.71 -2.72 -4.08 -6.73 - -5.29 -1.14 -5.14 -4.11 -1.11 -1.78 -2.28 -3.36 -3.77 -2.47 -3.08 -4.09 -2.34 -1.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.