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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -5.38 | -3.59 | -2.87 | -1.85 | -5.91 | -4.09 | -6.29 | 0.92 | -2.18 | -2.96 | -2.77 | -2.1 | 0.15 | -2.04 | -2.12 | -3.0 | - | -4.87 | -2.41 | 0.25 | -2.15 | -1.64 | -0.98 | 0.22 | -0.23 | 1.01 | 0.61 | 0.72 | 0.31 | 0.98 | 1.67 | 1.86 | 1.65 | 1.87 | 1.9 | 1.91 | 1.92 | 1.23 | 1.61 | 1.12 | 1.34 | 1.17 | -6.87 | - | -5.17 | -4.27 | -2.24 | -1.77 | -1.53 | -8.32 | -6.74 | -7.25 | -8.3 | -8.47 | - | -8.88 | |
MA_91949g0010 (CYP716A1) | -4.56 | -5.54 | - | - | -6.13 | - | - | -8.83 | -4.04 | -6.38 | - | - | -4.04 | - | -6.35 | - | - | - | -8.74 | 0.02 | - | -2.7 | -6.92 | -1.6 | -0.83 | 1.21 | 0.63 | -0.02 | -0.23 | 0.16 | 1.79 | 2.0 | 1.9 | 2.11 | 1.94 | 1.76 | 2.09 | 1.7 | 1.96 | 1.59 | 1.78 | 1.69 | - | -4.56 | -5.41 | - | -2.59 | -2.55 | -1.48 | -1.84 | -2.05 | -1.36 | -1.57 | -0.75 | -1.05 | -9.48 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.