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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.97 | -3.3 | -4.54 | -4.08 | -5.05 | -5.01 | -3.08 | -4.28 | -0.72 | 1.97 | -3.75 | -2.08 | -0.01 | 0.26 | -2.44 | -0.4 | - | -2.22 | 0.5 | -2.67 | 0.12 | -1.92 | -1.16 | -0.71 | -2.31 | -2.47 | -2.94 | -2.8 | -2.95 | -3.08 | 1.03 | 1.6 | 1.88 | 2.12 | 1.96 | 1.55 | 1.74 | 1.79 | 1.43 | 1.99 | 1.44 | 1.5 | -2.2 | -3.98 | -4.08 | -1.57 | -0.4 | -0.26 | -0.34 | -10.87 | -7.95 | -8.7 | -10.68 | -7.97 | -7.04 | -7.93 | |
MA_10436055g0010 (CSI1) | -0.9 | - | - | - | - | -1.02 | - | - | -5.22 | 2.58 | - | -0.55 | -1.6 | - | - | - | - | - | 1.94 | - | - | - | - | - | - | -0.18 | - | - | - | - | 0.95 | 1.55 | 1.15 | 2.64 | 1.58 | 0.87 | 1.91 | 1.64 | 2.21 | 0.79 | 1.47 | 2.62 | -2.01 | -0.84 | -1.86 | - | -0.72 | -4.38 | -3.52 | -2.16 | - | - | -2.12 | - | -0.8 | -3.28 |
| - | -1.9 | - | - | -2.71 | - | - | -2.65 | -4.01 | 2.18 | -0.33 | -1.48 | 1.56 | -0.46 | -1.61 | - | - | -1.87 | -2.47 | -2.93 | -1.11 | -2.17 | 0.11 | -0.81 | -1.87 | -1.08 | - | - | - | -2.85 | 1.43 | 1.02 | 1.68 | 2.42 | 2.19 | 2.2 | 1.47 | 1.51 | 1.79 | 1.19 | 1.26 | 1.42 | -1.94 | -1.67 | - | 0.96 | -2.61 | -5.29 | - | - | - | - | -2.27 | - | -3.69 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.