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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.53 | 0.74 | -2.36 | 1.72 | 1.98 | -2.28 | - | 0.49 | -0.45 | -2.97 | - | -0.61 | -1.17 | - | -0.6 | -0.1 | - | - | -3.1 | -0.2 | 0.79 | 0.18 | 0.43 | -1.49 | - | -0.13 | -0.8 | -1.49 | - | -0.53 | -0.84 | -1.85 | -0.6 | -1.58 | -0.64 | -1.02 | -2.62 | -0.65 | -3.64 | -0.88 | -3.49 | -2.27 | 1.96 | 0.91 | 2.12 | 0.77 | 0.03 | 0.52 | 0.56 | 0.36 | 1.3 | 1.16 | 0.52 | 0.05 | 0.25 | 1.07 | |
| -0.23 | -2.17 | 0.05 | 0.47 | 2.45 | -3.17 | -0.66 | 0.98 | -2.75 | -0.29 | -3.14 | -1.77 | -2.21 | -4.47 | -0.88 | -3.28 | - | -0.82 | -0.58 | 0.89 | -0.57 | 0.45 | -1.97 | -0.5 | -3.14 | 0.35 | 0.2 | 1.09 | -1.21 | 0.46 | -0.59 | -0.91 | -1.33 | -0.94 | -0.55 | -1.71 | -0.55 | -0.63 | -1.67 | 0.02 | -0.73 | 0.36 | 1.21 | 0.75 | 1.81 | -0.77 | -1.29 | -0.47 | -0.21 | 0.2 | 1.9 | 1.18 | 0.32 | -0.68 | 1.12 | -0.8 | |
| - | -1.55 | 0.89 | 0.37 | 1.91 | -1.55 | - | 2.23 | -2.33 | -1.55 | -1.15 | 0.28 | 0.06 | - | -1.59 | - | - | - | - | - | 1.32 | -0.4 | - | - | - | 0.64 | 0.62 | - | - | -0.29 | -0.64 | - | -1.29 | -0.76 | -1.58 | -0.25 | 0.52 | -0.41 | -0.57 | 0.52 | -2.46 | - | -0.54 | -1.37 | - | - | 1.46 | -0.01 | 0.54 | 1.46 | 2.32 | 1.96 | 1.33 | 1.15 | 1.57 | -3.88 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.