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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_14604g0010 (GH9B13) | -2.43 | - | -0.97 | 1.77 | -2.35 | - | - | -1.15 | 1.08 | -4.03 | -3.67 | -1.99 | -1.0 | -0.23 | -0.83 | - | - | - | -2.73 | - | -2.74 | -4.43 | -1.78 | - | - | 0.26 | - | - | - | - | -7.05 | -7.49 | -7.39 | -7.34 | - | - | -6.88 | -9.09 | -8.55 | -7.42 | -6.93 | -8.58 | 3.29 | 3.91 | 4.23 | 0.19 | -7.65 | -5.32 | -2.33 | -7.94 | -8.78 | - | -6.93 | - | - | -7.05 |
MA_2008916g0010 (GH9B13) | - | - | - | 1.57 | -3.83 | - | - | -0.77 | 0.49 | -4.42 | - | -2.59 | -1.01 | -1.51 | -1.78 | - | - | - | -3.12 | - | -0.77 | -4.37 | 0.65 | - | - | 1.36 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.96 | 3.85 | 4.31 | 1.31 | - | -5.35 | -2.28 | - | - | - | -4.66 | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.