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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_154233g0010 (SAG101) | -0.02 | -1.43 | -5.86 | -4.16 | -5.72 | - | -3.25 | -0.24 | -0.67 | 1.11 | -2.95 | -3.38 | -2.65 | -2.67 | -2.94 | -7.18 | - | -7.04 | 0.44 | -0.83 | 0.66 | -0.25 | -0.13 | -0.03 | 0.55 | -0.85 | -1.03 | -0.19 | -1.0 | 0.03 | 1.0 | 1.25 | 0.98 | 1.43 | 1.0 | 1.06 | 0.86 | 0.65 | 1.28 | 0.52 | 1.24 | 0.38 | 1.21 | 0.43 | 1.0 | 0.39 | -0.07 | 0.17 | 0.91 | -1.49 | -1.13 | -0.65 | -1.07 | -0.95 | -1.28 | 0.2 |
| 1.84 | - | - | - | - | - | - | - | -7.78 | 0.88 | - | -1.21 | - | -0.49 | -1.94 | - | - | - | -2.25 | -3.15 | - | -4.55 | - | -1.61 | - | 0.91 | - | -3.61 | -2.74 | - | 1.96 | 1.55 | 1.3 | 2.04 | 1.6 | 2.09 | 1.78 | 2.1 | 1.92 | 1.05 | 2.05 | 1.73 | - | - | - | -4.36 | -3.41 | -0.81 | 1.44 | -4.36 | -3.33 | -1.74 | -4.46 | -2.0 | - | -0.99 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.