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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | - | - | - | - | - | -3.07 | - | - | - | - | - | - | - | - | -3.54 | 1.15 | - | -3.15 | - | 1.49 | 2.06 | -1.88 | 2.15 | 0.6 | 1.9 | 2.21 | 0.9 | 1.1 | 0.57 | 1.43 | 1.93 | 1.87 | 1.75 | 1.84 | 1.78 | 0.93 | 1.09 | 0.72 | - | - | - | -2.96 | - | -3.59 | -5.56 | - | - | - | - | - | - | - | |
MA_137265g0010 (HHP5) | -1.44 | 0.73 | -3.22 | -3.46 | -2.22 | -2.0 | - | -1.58 | -1.22 | -1.33 | 0.05 | -0.46 | -0.46 | -0.91 | -0.91 | -2.34 | - | -5.15 | -1.81 | 0.87 | -0.75 | -0.82 | -0.41 | 0.83 | 1.22 | -0.81 | 1.58 | 1.39 | 0.73 | 1.32 | 0.42 | 0.11 | 0.15 | 0.78 | 1.12 | 1.22 | 1.52 | 1.39 | 1.21 | 0.72 | 0.49 | 0.94 | -1.33 | -1.9 | -1.95 | -0.05 | 0.01 | -1.36 | -1.22 | -0.79 | -0.86 | -1.2 | -1.1 | -1.03 | -0.36 | -1.58 |
MA_676718g0010 (HHP4) | -1.59 | 0.95 | -1.13 | -1.77 | -0.09 | 0.46 | -1.98 | -1.5 | -0.42 | -2.09 | 0.79 | -0.48 | -0.21 | -0.48 | -1.08 | -1.01 | - | -0.6 | -2.31 | 1.02 | -0.62 | -0.39 | -0.19 | 0.62 | 1.46 | -0.99 | 1.9 | 1.25 | 0.5 | 1.31 | 0.21 | -0.09 | -0.02 | 0.51 | 0.7 | 0.92 | 0.88 | 0.95 | 1.06 | 0.59 | 0.38 | 0.5 | -0.8 | -1.81 | -1.57 | -0.19 | 0.14 | -1.23 | -1.24 | -1.48 | -1.78 | -2.1 | -1.84 | -2.14 | -1.56 | -1.96 |
| -3.24 | - | - | - | - | - | - | - | -2.25 | - | 2.27 | -0.57 | 0.16 | -1.07 | -3.38 | - | - | - | - | 2.43 | -3.73 | 0.14 | -4.73 | -0.74 | 1.99 | -0.7 | 2.64 | 2.1 | 1.78 | 2.12 | -0.4 | 0.06 | -0.2 | 1.4 | 1.66 | 0.39 | 0.88 | 0.27 | 0.25 | 0.02 | -0.82 | 0.54 | - | - | - | - | 0.48 | -7.31 | -7.38 | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.