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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3.12 | -0.23 | -4.68 | -4.65 | - | - | - | -4.42 | -1.75 | 1.44 | - | - | - | - | -7.9 | -5.0 | - | -4.28 | 0.39 | -1.02 | -0.62 | 1.43 | -0.29 | -1.39 | 0.82 | 3.86 | -0.48 | -1.18 | -1.84 | -0.64 | -0.19 | -0.77 | -0.35 | 0.1 | -0.2 | -0.16 | -0.59 | 0.02 | -1.42 | -0.33 | -0.32 | -0.21 | -2.71 | -3.22 | -4.18 | 1.24 | 2.3 | -2.31 | -0.51 | -6.71 | - | - | -1.84 | -5.66 | -6.06 | -3.31 | |
| 4.38 | 1.77 | -9.75 | -6.03 | -9.41 | - | - | -3.1 | -3.01 | -1.59 | - | -10.58 | -10.53 | - | - | - | - | -7.94 | -2.62 | -4.03 | 0.16 | 2.13 | 0.29 | -4.54 | -1.9 | 3.02 | -4.14 | -3.81 | -5.02 | -3.39 | -2.36 | -2.82 | -2.35 | -1.93 | -2.4 | -2.73 | -2.71 | -2.08 | -3.22 | -2.44 | -2.36 | -2.43 | -3.44 | -3.19 | -3.76 | 2.33 | 2.85 | -2.43 | -1.01 | -7.99 | - | - | -4.71 | -9.24 | -8.36 | -3.28 | |
| 4.59 | 1.64 | -5.6 | -3.7 | -8.55 | -9.45 | -7.82 | -2.89 | -2.04 | -2.41 | - | - | - | - | - | -8.86 | - | -10.31 | -3.88 | -6.09 | 0.17 | 2.01 | 0.42 | -7.05 | -6.02 | 2.37 | -6.73 | -6.57 | -6.84 | -6.91 | -1.94 | -3.09 | -1.98 | -2.08 | -2.23 | -2.81 | -3.26 | -2.32 | -3.69 | -2.29 | -2.27 | -2.32 | -4.39 | -4.26 | -3.93 | 2.4 | 2.97 | -2.25 | -0.79 | -11.21 | - | -11.16 | -7.95 | -9.23 | - | -3.88 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.