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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.81 | -1.69 | -5.4 | -3.05 | -3.21 | -6.32 | -5.43 | -1.98 | -4.55 | 1.67 | -2.82 | -1.96 | -1.37 | -1.91 | -1.89 | -2.91 | - | -2.78 | 1.76 | -0.55 | -2.14 | -2.52 | -1.08 | -1.52 | -1.77 | 0.76 | -0.89 | -2.04 | -1.65 | -1.65 | 0.47 | 0.41 | 0.62 | 0.38 | 0.86 | 0.56 | 0.86 | 0.78 | 0.49 | 0.74 | 1.37 | 0.89 | -4.02 | -3.31 | -0.73 | -0.79 | -0.41 | -4.33 | -3.73 | 1.56 | 1.99 | 1.8 | 1.18 | 1.38 | 1.74 | -1.54 | |
MA_916238g0010 (TRX1) | 0.2 | -0.61 | -3.14 | -1.62 | -2.76 | -2.52 | -1.45 | -1.58 | -1.16 | 1.11 | -0.24 | -1.1 | -0.35 | -0.33 | -1.17 | -0.85 | -4.7 | -1.46 | 0.71 | -2.57 | -0.79 | -1.3 | -1.26 | 0.01 | -2.79 | -0.35 | -3.1 | -3.04 | -3.34 | -3.86 | 1.06 | 1.09 | 0.81 | 1.28 | 0.85 | 1.15 | 0.7 | 1.14 | 0.93 | 0.99 | 1.32 | 0.94 | -0.46 | -1.3 | -0.35 | -0.71 | -0.27 | -1.41 | -1.91 | 0.7 | 1.42 | 1.21 | 0.72 | 0.82 | 0.54 | -2.17 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.