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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | -1.34 | 2.51 | 3.02 | 1.0 | 1.68 | - | -0.56 | -2.23 | 2.61 | -2.3 | -0.4 | 0.62 | 2.37 | -0.04 | 2.29 | - | - | 1.63 | - | - | -0.8 | - | -0.83 | - | -1.35 | -1.15 | -1.26 | -1.37 | - | -0.19 | -1.14 | -2.22 | -2.14 | 0.48 | - | - | -0.42 | - | - | -2.23 | -1.18 | -0.52 | -2.5 | -1.19 | - | - | -2.4 | -1.53 | -0.41 | -0.23 | -1.05 | -2.16 | -1.4 | -0.51 | -1.34 | |
| - | - | -0.42 | 2.32 | 2.22 | - | - | - | -1.24 | 1.83 | - | 0.74 | 1.32 | 2.82 | - | 2.84 | - | - | 2.18 | 0.33 | - | -1.49 | - | - | -0.6 | -0.57 | - | -0.55 | - | - | -0.55 | - | -1.38 | - | -1.67 | - | - | -1.54 | - | -1.8 | -0.55 | - | -0.31 | 0.13 | -0.52 | -0.3 | - | -1.64 | -1.66 | -0.01 | -0.42 | 0.5 | -0.64 | 0.67 | 0.94 | 0.05 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.