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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1.07 | 5.17 | - | - | - | - | - | -6.79 | -0.51 | -2.04 | - | -4.7 | -6.65 | - | -6.12 | - | - | - | -1.89 | -4.15 | -0.47 | -1.24 | -1.71 | - | -4.47 | 0.42 | - | -6.0 | -6.13 | -5.04 | -2.25 | -2.69 | -3.06 | -2.05 | -2.13 | -2.19 | -2.63 | -3.94 | -3.33 | -3.41 | -2.36 | -2.9 | 1.3 | 0.3 | 0.07 | -0.66 | 0.88 | 0.56 | 0.99 | - | -3.71 | -1.37 | -7.19 | -6.89 | -0.58 | -7.36 | |
| 0.91 | 5.13 | -2.56 | -3.09 | -3.83 | - | - | - | -1.12 | -2.82 | - | - | - | - | -4.82 | - | - | - | -1.26 | - | -0.4 | -0.61 | -3.58 | - | - | 0.02 | - | -3.69 | -3.82 | -2.73 | -2.24 | -3.59 | -4.52 | -1.31 | -1.71 | -3.8 | -3.08 | -2.87 | -2.14 | -2.76 | -2.94 | -1.66 | 1.4 | 0.62 | -1.05 | 0.24 | 1.47 | -0.73 | -0.16 | -2.12 | -1.65 | -0.44 | -2.78 | -2.78 | 0.12 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.