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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_29075g0010 (ACA8) | -1.2 | -1.73 | - | -4.17 | -5.08 | - | - | 2.15 | -0.56 | 2.0 | -0.2 | -2.09 | -2.75 | -5.04 | -2.52 | - | - | - | 2.08 | -0.85 | 1.64 | -2.27 | 0.87 | -2.57 | -2.69 | 0.16 | -1.56 | -2.66 | -0.31 | -1.42 | 0.87 | 0.81 | 1.16 | 0.89 | 0.97 | 0.6 | 0.68 | 1.34 | 1.29 | 0.72 | 0.74 | 0.3 | 0.2 | 0.44 | 0.52 | -0.27 | -0.52 | -0.1 | 0.14 | -3.24 | -0.92 | -1.4 | -4.77 | -3.1 | -1.35 | -2.14 |
MA_815867g0010 (CIF1) | -0.68 | -1.2 | - | -2.48 | - | - | - | 2.29 | -0.76 | 1.5 | 0.12 | -1.14 | -0.79 | -1.68 | -1.85 | -3.24 | - | - | 1.52 | -1.79 | 1.55 | -2.77 | 1.67 | -3.14 | -1.45 | -0.12 | -2.02 | -1.55 | -1.64 | -0.35 | 0.73 | 0.78 | 1.05 | 1.28 | 0.73 | 0.88 | 0.7 | 0.98 | 0.74 | 0.44 | 0.06 | 0.82 | -0.1 | -0.02 | 0.46 | -0.77 | -1.67 | -0.41 | -0.11 | -1.03 | 0.14 | -0.72 | -1.15 | -0.82 | -0.18 | -1.48 |
MA_9527432g0010 (CIF1) | -0.04 | -2.74 | - | - | - | - | - | 1.48 | -2.73 | 2.57 | - | -0.79 | -1.32 | - | -2.19 | - | - | - | 2.0 | - | 1.75 | - | -2.53 | - | - | 0.04 | 0.04 | -2.65 | -1.78 | - | 1.49 | 1.54 | 1.75 | 1.0 | 1.72 | 0.18 | 0.91 | 1.78 | 1.14 | 0.6 | 1.26 | 0.85 | -0.18 | -0.09 | 0.85 | -2.39 | - | -0.43 | -0.69 | - | -3.7 | -0.99 | -3.84 | - | -2.5 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.