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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_37275g0010 (RIC7) | -1.5 | -1.06 | -1.32 | -0.52 | -0.98 | -0.62 | -1.57 | 0.17 | -0.01 | 0.13 | 2.96 | 1.26 | 1.65 | 1.21 | 0.54 | -2.0 | - | -0.2 | -0.34 | -0.5 | 0.56 | -1.03 | 0.3 | -0.51 | -0.15 | -1.54 | -0.13 | -0.33 | -0.72 | -0.35 | -0.42 | -0.83 | -0.34 | -0.28 | -0.4 | -0.28 | -0.46 | -0.27 | -0.26 | -0.33 | -0.24 | -0.86 | -0.69 | -1.57 | -1.95 | -0.27 | -0.14 | -0.37 | -0.41 | -0.17 | 0.88 | 0.51 | 0.2 | -0.5 | 0.59 | -1.55 |
| - | 1.16 | -1.57 | -1.94 | -2.32 | -0.55 | - | 1.36 | -33.75 | -5.44 | 3.75 | 1.12 | 1.52 | 0.94 | -0.13 | 0.35 | - | -1.44 | -4.52 | - | 2.56 | - | 0.31 | - | - | -3.59 | - | - | - | - | - | - | - | - | - | - | - | - | -4.66 | - | - | - | -3.33 | -2.89 | - | 0.35 | 0.54 | -7.46 | -7.62 | 1.37 | -0.88 | 1.35 | 1.13 | 1.03 | 2.27 | 0.81 | |
| 0.94 | -1.19 | -4.88 | - | -3.51 | -0.21 | - | 0.72 | -0.31 | -4.22 | 3.84 | 1.69 | 1.93 | -0.04 | -0.74 | - | - | - | -2.04 | -2.02 | 0.83 | 0.56 | -0.37 | -1.69 | -1.9 | -0.82 | -2.58 | -3.43 | -3.56 | -3.47 | -3.76 | -4.98 | -4.29 | -3.75 | -3.52 | -4.28 | -5.02 | -4.08 | -3.59 | -2.7 | -4.22 | -5.87 | -1.08 | -1.16 | -2.5 | -1.1 | -0.16 | -3.21 | -3.51 | 1.12 | 1.99 | 1.84 | 1.17 | 1.32 | 1.69 | -5.91 | |
MA_8677585g0010 (VTC1) | -0.57 | 0.11 | -1.63 | -0.53 | -1.61 | -1.69 | -3.58 | 0.18 | -0.94 | -1.22 | 3.39 | 1.42 | 1.39 | 0.88 | -0.28 | -1.25 | - | -1.98 | -1.51 | -1.89 | 0.22 | -1.82 | -0.47 | -2.27 | -1.96 | -2.81 | -1.64 | -1.59 | -2.57 | -1.82 | -0.12 | 0.04 | -0.07 | -0.13 | -0.23 | -0.37 | -0.09 | -0.11 | -0.11 | -0.2 | -0.25 | -0.41 | 0.92 | 0.59 | -0.08 | -0.78 | -2.78 | -0.83 | -0.86 | 0.41 | 1.26 | 0.67 | -0.04 | 0.08 | 0.66 | -0.04 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.