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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.19 | -1.3 | - | - | -2.57 | - | - | -0.41 | -0.4 | 1.11 | - | - | - | - | -2.32 | - | - | - | 1.17 | 1.57 | -0.09 | - | - | 0.37 | 1.9 | -2.6 | 0.9 | 1.11 | -0.34 | -0.25 | 0.8 | 1.18 | 0.87 | -0.0 | 0.79 | 1.51 | 2.03 | 0.94 | -0.41 | 0.68 | 1.73 | 0.71 | - | - | -1.58 | -0.44 | -1.01 | 0.37 | 1.12 | - | - | - | - | - | -2.01 | 1.89 | |
| -0.48 | -1.0 | - | - | -1.21 | - | - | -1.39 | -0.55 | 1.24 | - | - | -1.64 | - | -0.82 | - | - | - | 0.93 | 0.24 | -0.06 | 0.28 | 0.79 | 0.82 | 0.25 | -0.56 | 1.07 | 0.09 | 0.69 | 1.27 | 0.84 | -0.4 | -0.2 | -0.04 | 0.68 | 1.04 | 0.3 | 0.29 | 0.72 | 0.66 | 1.65 | -0.38 | -1.28 | -2.19 | 1.01 | 0.08 | 0.29 | 0.34 | 0.75 | -1.96 | -0.65 | -0.41 | -1.28 | -1.56 | 0.12 | 1.69 | |
| -0.86 | -3.78 | - | -2.56 | - | - | - | -0.73 | 0.64 | 1.13 | - | - | - | - | -2.48 | - | - | - | 0.95 | -0.43 | -1.25 | -4.63 | -2.58 | -0.11 | 0.42 | -1.24 | 0.5 | -1.11 | 0.18 | -0.56 | 1.17 | 1.52 | 1.22 | 1.41 | 1.29 | 1.67 | 1.52 | 1.71 | 0.99 | 0.62 | 1.49 | 0.93 | 0.36 | -1.64 | -3.06 | -1.86 | -1.17 | 1.22 | 1.13 | -4.78 | - | - | - | - | -4.54 | 1.94 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.