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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | -5.66 | -2.47 | -2.43 | -3.09 | -4.92 | -0.56 | - | - | 2.82 | -4.83 | 4.32 | -1.03 | -1.46 | 2.79 | -3.76 | 3.58 | -2.04 | 2.19 | - | - | - | - | - | - | -3.36 | - | - | - | - | -3.64 | -3.49 | -4.77 | -6.14 | -2.46 | -5.31 | -3.54 | -4.65 | -2.36 | -2.28 | -4.44 | -3.0 | - | - | -4.53 | -6.32 | - | - | - | -1.1 | -1.59 | -2.63 | -1.72 | -2.35 | -1.21 | -8.07 | |
| - | - | -0.74 | -3.05 | -0.25 | - | - | - | -7.16 | 4.02 | -3.93 | 4.37 | -3.72 | - | 2.6 | - | 2.6 | -1.02 | 0.92 | -4.08 | - | - | - | - | - | -5.85 | - | - | - | - | -2.84 | - | - | - | -1.33 | -1.62 | -2.37 | - | -1.71 | -1.06 | -2.33 | -1.06 | - | - | - | - | - | - | - | -2.67 | - | - | - | - | -3.53 | -4.0 | |
| - | -3.23 | - | - | -4.7 | -3.5 | - | - | -8.4 | 4.06 | -5.11 | 4.45 | -3.8 | -1.06 | 3.07 | - | - | - | 2.87 | - | - | - | - | - | - | -6.37 | - | - | -4.28 | - | - | -3.59 | - | - | -6.55 | -2.67 | - | - | - | -3.35 | -5.01 | -3.15 | - | - | -3.51 | - | - | - | - | -2.9 | -4.13 | -5.0 | -4.2 | - | -4.99 | - | |
| - | -2.67 | -1.61 | -4.6 | -2.97 | -4.22 | -4.63 | - | -6.81 | 3.49 | -4.8 | 4.43 | -2.01 | -0.89 | 3.28 | - | 1.53 | -2.48 | 2.73 | - | - | -5.64 | - | - | - | -5.43 | - | - | -4.87 | - | -4.88 | -4.18 | -3.7 | - | -2.91 | -3.54 | -5.86 | -3.3 | -2.97 | -2.12 | -5.74 | -3.87 | - | - | - | - | -4.54 | - | - | -1.54 | -1.85 | -2.57 | -4.25 | -3.78 | -2.11 | -5.26 | |
| -2.27 | - | -1.87 | -1.2 | -1.4 | -4.09 | - | -3.43 | - | 3.66 | -2.23 | 4.38 | -1.95 | -3.47 | 3.28 | -2.48 | - | -1.35 | 3.01 | - | - | - | - | - | - | -5.14 | - | - | - | - | - | - | -3.6 | - | -3.08 | - | -0.58 | -3.44 | -2.37 | -1.88 | - | - | - | - | - | - | -1.09 | - | - | - | - | - | -2.33 | - | - | -5.43 | |
| 0.16 | 0.59 | - | -1.96 | -2.77 | - | - | -0.93 | -0.55 | 3.85 | -0.21 | -0.33 | -1.47 | - | 0.13 | - | - | - | 2.96 | -2.47 | -0.16 | -0.67 | 0.09 | -1.03 | -3.33 | 0.05 | -2.01 | -1.76 | -2.21 | -3.33 | -2.89 | -2.67 | -3.29 | -4.11 | -3.86 | -4.46 | -3.96 | -4.59 | - | -3.96 | -3.35 | - | 0.88 | 0.9 | 0.62 | -0.7 | -0.11 | 2.42 | 2.48 | -2.09 | -1.63 | -1.95 | -4.15 | -2.67 | -0.91 | 0.1 | |
| - | - | - | - | - | - | - | - | 0.58 | 5.38 | - | - | 0.86 | - | -1.31 | - | - | - | -2.18 | - | - | - | - | - | - | 0.52 | - | - | - | - | -1.34 | 0.99 | 0.14 | - | -0.29 | -1.65 | 0.35 | -0.91 | 0.06 | -1.19 | -0.97 | - | - | - | - | - | - | -4.24 | -5.14 | - | - | - | - | -2.66 | - | -1.64 | |
| - | - | - | - | - | - | - | 2.02 | -0.65 | 3.49 | - | 0.17 | 0.05 | - | - | - | - | - | 2.74 | 1.3 | - | 0.77 | - | - | - | -0.02 | - | - | - | - | - | - | 1.39 | - | - | -1.24 | - | 1.75 | -0.2 | - | 1.71 | 1.49 | - | - | - | - | 1.77 | - | - | 1.12 | - | 2.19 | -0.29 | - | - | 0.84 | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_11543g0010 (HSC70) | - | - | - | - | - | - | - | - | -0.85 | 4.8 | - | - | - | - | - | - | - | - | 3.82 | - | - | - | - | - | - | 0.93 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.91 | 3.26 | - | - | - | - | - | - | - |
| - | - | - | -1.31 | - | - | - | -0.3 | 1.38 | 3.17 | - | - | -1.7 | -0.08 | -0.16 | -0.23 | - | - | 0.51 | -2.15 | 0.67 | - | - | 3.05 | 1.23 | -1.09 | - | 0.97 | - | 0.51 | 1.8 | 0.95 | 0.66 | -0.33 | 0.85 | 1.13 | 0.04 | -1.14 | 1.1 | -0.62 | -0.2 | 0.63 | -2.34 | -1.53 | - | -1.78 | - | -1.46 | -0.58 | -2.12 | -0.9 | -0.99 | -2.23 | - | - | -0.66 | |
| - | - | - | - | - | - | - | - | 1.28 | 4.78 | - | - | - | - | - | - | - | - | 2.77 | -2.74 | -0.68 | -1.73 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.76 | 0.92 | -1.59 | - | - | 1.87 | -2.62 | - | 2.2 | 1.91 | -1.62 | 1.73 | |
| - | - | - | - | - | - | - | - | - | 5.35 | - | - | - | - | - | - | - | - | 3.92 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.55 | - | - | - | - | - | - | - | - | 2.48 | - | 1.62 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.64 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_1379g0010 (TCP3) | - | - | - | - | 2.76 | - | - | - | -2.19 | 4.72 | - | 4.07 | - | - | - | - | - | - | 0.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.58 | 1.21 | - | - | - | - | - | - | -0.32 |
MA_15398g0030 (HSP70) | - | - | - | - | - | - | - | - | 1.84 | 4.06 | 1.4 | 0.95 | - | - | 0.58 | - | - | - | 3.5 | - | - | - | - | - | - | -2.29 | - | - | - | - | -1.5 | - | - | -0.49 | - | - | - | - | -0.69 | - | -0.46 | - | - | - | - | - | - | 2.74 | 3.18 | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | 4.77 | - | - | - | - | - | - | - | - | 4.84 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | -3.15 | -3.38 | -3.12 | -5.08 | - | - | - | -7.87 | 3.68 | -3.33 | 4.6 | -1.66 | -0.46 | 3.33 | - | -1.52 | - | 2.35 | - | - | - | - | - | -3.7 | -6.15 | - | - | - | - | -4.16 | -2.37 | -4.23 | -3.82 | -2.15 | -4.1 | -3.76 | -4.9 | -4.47 | -4.55 | - | -4.16 | - | - | - | - | -4.44 | - | - | -1.68 | -2.34 | -3.97 | -3.22 | - | -2.34 | -7.21 | |
| - | - | - | - | - | - | - | - | - | 5.28 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.64 | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.96 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.2 | - | - | - | - | - | - | - | - | 4.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_183723g0010 (KCS4) | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | 5.66 | - | - | - | - | - | - | - | - | 2.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | 0.83 | 5.41 | - | - | - | - | - | - | - | - | 3.15 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.58 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | 4.32 | - | - | - | - | 4.63 | - | - | - | - | - | - | - | - | 3.49 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_41001g0010 (RHC2A) | - | - | - | - | - | - | - | - | - | 4.77 | - | - | - | - | - | - | - | - | 4.84 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | 5.18 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.7 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.73 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 4.77 | - | - | - | - | - | - | - | - | 4.84 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.3 | - | - | - | - | - | - | - | - | 3.86 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.09 | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | -3.73 | -4.86 | -1.95 | -3.06 | -4.48 | -0.57 | -5.88 | - | 3.6 | -2.87 | 4.54 | -1.49 | -0.65 | 3.1 | -4.19 | - | - | 2.95 | - | - | -5.89 | - | - | - | -6.04 | - | - | - | - | -4.78 | -3.37 | - | -4.57 | -3.26 | -4.73 | -3.9 | -5.19 | -4.02 | -2.02 | -4.69 | -3.17 | - | -3.68 | - | -4.95 | - | -8.61 | - | -1.61 | -2.96 | -2.75 | -4.55 | -3.36 | -1.9 | -5.84 | |
| -0.08 | -0.19 | - | - | - | - | - | - | -0.28 | 5.05 | - | - | - | - | - | - | - | - | 2.4 | - | - | - | - | - | - | -1.65 | - | - | - | - | -0.55 | - | -1.03 | - | - | - | - | -0.25 | - | - | - | - | - | - | - | 0.15 | 0.2 | -0.76 | -1.64 | 1.49 | - | - | 1.78 | 1.68 | - | - | |
| 0.31 | - | - | - | - | - | - | 0.69 | -1.18 | 4.03 | - | -1.98 | - | 1.48 | -1.42 | - | - | - | 3.5 | - | 1.14 | 0.21 | - | - | - | 0.23 | - | - | - | - | -3.36 | -0.6 | -2.22 | -0.28 | - | -2.04 | -0.91 | 0.37 | - | 0.07 | -0.09 | -2.16 | -1.04 | - | -2.23 | -1.05 | 1.29 | -0.64 | -0.11 | -2.39 | 0.32 | 0.79 | -0.38 | - | -0.55 | 0.18 | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 2.53 | - | - | - | - | - | - | - | 0.33 | 5.08 | - | - | - | - | - | - | - | - | 3.27 | - | - | 0.02 | - | - | - | -4.3 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.38 | -2.0 | 1.67 | - | - | -3.54 | -1.29 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.11 | - | - | - | - | - | - | - | - | 4.43 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.59 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_911577g0010 (PDR1) | - | - | - | - | - | - | - | - | -3.89 | 5.65 | - | - | - | - | - | - | - | - | -14.6 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.31 | -0.32 | - | - | - | - |
MA_91753g0010 (CRT1) | - | - | - | - | - | - | - | - | - | 5.58 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.03 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
MA_942821g0010 (HEL) | - | - | - | 3.04 | - | - | - | - | -2.88 | 4.12 | - | 0.75 | 0.76 | - | - | - | - | - | -0.81 | - | - | 0.55 | - | - | - | -1.98 | - | - | - | - | - | 1.46 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.88 | 2.4 | - | 3.53 | 0.64 | - | 0.67 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.