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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_35466g0010 (BMY8) | -1.47 | 3.43 | - | - | - | - | - | - | -4.06 | 1.73 | - | -3.24 | -3.25 | - | - | - | - | - | 0.28 | - | - | -0.43 | - | - | - | -5.43 | - | - | - | - | 1.64 | 1.59 | 1.01 | 0.82 | 1.86 | -0.05 | 2.47 | 2.39 | 2.1 | 0.14 | 2.0 | 1.7 | -2.38 | - | - | -1.8 | - | -2.58 | -2.79 | -2.51 | - | - | -3.55 | -2.54 | - | -2.97 |
MA_753488g0010 (CYP76C2) | - | 3.19 | - | - | - | - | - | -4.5 | -1.76 | - | - | - | - | - | - | - | - | - | -5.15 | - | - | -2.32 | - | - | - | -1.53 | - | - | - | - | 1.36 | 2.04 | 1.16 | 2.29 | 2.78 | 0.8 | 2.41 | 1.54 | 2.63 | 1.21 | 1.88 | 1.65 | - | - | - | - | - | -7.32 | -7.08 | - | - | - | - | - | - | - |
MA_9400165g0010 (BMY8) | -2.58 | 3.7 | - | - | - | - | - | -3.39 | - | -0.23 | - | - | -2.35 | -3.93 | - | - | - | - | -1.91 | - | - | - | - | - | - | -5.87 | - | - | - | - | 2.12 | 1.55 | 1.19 | 1.64 | 2.05 | -0.45 | 2.47 | 2.17 | 2.14 | 0.35 | 2.52 | 1.04 | -2.07 | - | - | - | - | - | - | -4.59 | - | - | - | -7.49 | - | -4.98 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.