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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.01 | -1.38 | -0.03 | -1.73 | -1.14 | -0.42 | 0.07 | -0.75 | -0.04 | 0.26 | 1.88 | 0.26 | 1.11 | 0.41 | -0.15 | -0.64 | - | -1.09 | 0.49 | -0.06 | -0.33 | -0.02 | -0.5 | -0.62 | -0.86 | -0.15 | 1.01 | -0.3 | 0.34 | -0.66 | -0.67 | -1.99 | -1.07 | -1.41 | -1.09 | 0.14 | -0.54 | -1.29 | -0.59 | -0.91 | 0.32 | -0.84 | -1.4 | -1.39 | -0.76 | -0.9 | 0.04 | -0.53 | -0.82 | 1.09 | 1.57 | 1.22 | 1.36 | 0.68 | 1.13 | -0.17 | |
| -2.08 | - | 0.77 | 0.74 | -3.17 | -1.83 | 0.94 | - | -0.11 | -1.79 | 2.64 | 1.14 | 1.54 | -0.56 | 1.01 | - | - | 0.77 | -0.69 | - | -1.35 | - | - | -1.74 | - | -0.94 | -0.31 | - | -2.35 | - | 0.79 | -0.18 | 0.98 | -0.07 | 0.06 | 0.86 | -0.34 | -3.34 | -0.66 | 0.21 | -0.15 | - | - | -2.78 | -19.84 | - | - | -2.61 | -1.49 | 1.02 | 2.02 | 1.87 | 1.18 | 1.34 | 1.22 | -0.32 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.