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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | 2.3 | - | - | - | - | - | - | 2.11 | 4.37 | -0.43 | 0.64 | 3.44 | - | - | - | - | 0.65 | - | - | - | - | - | - | -1.66 | - | - | - | - | - | - | -0.64 | - | - | - | 2.48 | -0.96 | - | -3.6 | - | - | - | - | -0.69 | - | - | - | - | -0.62 | -0.53 | -2.45 | -0.77 | 0.55 | - | - | |
| - | - | 2.3 | - | - | - | - | - | - | 2.11 | 4.37 | -0.43 | 0.64 | 3.44 | - | - | - | - | 0.65 | - | - | - | - | - | - | -1.66 | - | - | - | - | - | - | -0.64 | - | - | - | 2.48 | -0.96 | - | -3.6 | - | - | - | - | -0.69 | - | - | - | - | -0.62 | -0.53 | -2.45 | -0.77 | 0.55 | - | - | |
| - | - | - | - | - | - | - | - | - | 1.51 | 4.58 | - | 2.91 | 3.45 | 2.22 | - | - | - | 1.29 | - | - | 1.11 | - | - | - | -0.7 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.01 | - | - | - | - | |
MA_200160g0010 (UBC15) | - | - | - | - | 1.11 | 0.74 | - | - | -3.61 | - | 4.39 | -0.22 | 1.91 | 3.26 | -0.6 | - | - | - | - | - | - | - | - | 0.52 | 1.01 | -1.4 | - | - | 0.29 | 2.71 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.33 | - | 0.26 | -1.34 | - | - | 1.39 | - |
| - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | -1.04 | - | -0.99 | -4.22 | - | 4.92 | 2.23 | 1.74 | 1.9 | 0.2 | - | - | - | - | - | - | -0.1 | - | - | - | -1.84 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.37 | - | - | -0.4 | -1.87 | -1.76 | -1.87 | -0.89 | 1.21 | -0.14 | -1.49 | - | 2.03 | - | |
MA_48451g0010 (VLN3) | - | 0.58 | - | -1.19 | - | - | - | - | - | - | 4.65 | 2.28 | 1.95 | 2.48 | -0.43 | 2.8 | - | - | - | - | 1.2 | - | - | - | - | -1.42 | - | - | - | - | - | - | - | - | -1.71 | - | - | - | - | - | - | - | - | -0.85 | 0.05 | - | - | -2.81 | - | -0.42 | - | - | - | - | -0.13 | -0.73 |
| - | - | - | - | - | - | - | - | -3.23 | 1.37 | 4.97 | - | -0.54 | 4.03 | 0.07 | - | - | - | 0.71 | - | - | - | - | - | - | -2.22 | - | - | - | - | -1.96 | - | - | - | - | - | - | -0.96 | -0.51 | -1.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | -0.4 | - | - | - | - | -0.34 | 4.99 | - | 3.45 | 2.95 | 1.02 | - | - | - | -0.19 | - | - | - | - | - | - | -3.52 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | 5.53 | 1.61 | 2.61 | - | - | - | - | - | - | - | - | - | - | - | - | -0.46 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | 2.13 | - | - | - | 1.43 | 5.48 | 1.64 | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | 2.3 | - | - | - | - | - | - | 2.11 | 4.37 | -0.43 | 0.64 | 3.44 | - | - | - | - | 0.65 | - | - | - | - | - | - | -1.66 | - | - | - | - | - | - | -0.64 | - | - | - | 2.48 | -0.96 | - | -3.6 | - | - | - | - | -0.69 | - | - | - | - | -0.62 | -0.53 | -2.45 | -0.77 | 0.55 | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.