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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | -3.72 | -2.31 | -4.99 | - | -5.1 | -5.51 | -4.89 | -2.91 | -3.26 | - | - | -5.31 | - | - | - | -5.56 | 1.41 | 0.22 | -0.33 | 0.3 | - | -0.56 | 1.76 | 1.78 | 1.32 | 0.65 | 1.1 | 1.48 | 1.3 | 1.79 | 1.0 | 0.95 | 1.29 | 0.23 | 0.56 | 1.38 | 0.6 | 0.97 | 0.96 | -2.46 | -2.68 | -1.69 | 2.58 | 1.31 | -1.58 | -1.23 | - | - | - | -4.4 | -5.1 | -4.03 | -6.62 | |
| -0.27 | 0.02 | -1.79 | -2.15 | -1.59 | -0.55 | -2.24 | -1.13 | -0.67 | -1.35 | 1.35 | 0.08 | 0.34 | -0.38 | -1.18 | -1.48 | - | -1.44 | -1.58 | 1.25 | 1.03 | 0.58 | -0.22 | -0.55 | 0.72 | 0.9 | 1.05 | 0.72 | 0.23 | 0.55 | 0.46 | 0.1 | 0.29 | 0.48 | 0.52 | 0.67 | 0.75 | 0.33 | 0.42 | 0.25 | 0.37 | 0.29 | -0.44 | -1.42 | -0.2 | 1.07 | 0.9 | -0.62 | -0.27 | -1.33 | -1.27 | -1.1 | -1.54 | -0.89 | -0.57 | -2.8 | |
MA_10426678g0010 (UGT74F1) | - | - | - | - | - | - | - | -4.76 | -3.68 | -3.9 | - | - | - | - | - | - | - | - | -4.79 | 2.06 | -0.31 | -1.2 | -2.75 | - | 0.39 | 1.24 | 2.39 | 1.44 | 0.55 | 0.88 | 1.44 | 1.25 | 1.81 | 1.67 | 1.01 | 0.91 | 1.61 | 0.71 | 2.0 | 0.81 | 1.3 | 1.54 | -2.37 | -4.13 | -2.63 | 1.51 | -4.66 | -2.35 | -2.01 | - | - | -4.73 | - | - | - | - |
| -0.19 | - | - | - | - | - | - | - | 0.46 | -4.06 | - | - | - | - | - | - | - | - | -7.2 | 1.87 | - | -0.35 | - | - | - | 0.61 | 1.71 | 0.46 | -0.54 | 0.08 | 2.04 | 1.92 | 2.44 | 1.71 | 0.87 | 1.44 | 1.41 | 0.29 | 1.53 | 1.02 | 0.78 | 1.99 | -1.7 | -10.9 | -3.17 | 0.83 | - | -5.65 | -3.38 | -2.32 | -1.47 | 0.34 | -1.57 | - | 0.27 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.