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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10435437g0030 (DPE1) | 0.26 | 0.0 | -4.95 | -1.47 | -2.91 | -3.17 | - | 0.27 | -0.08 | -0.29 | -1.85 | -0.99 | 0.03 | -1.5 | 0.11 | -3.27 | - | -5.14 | -0.07 | -0.62 | 0.32 | -0.36 | 0.32 | -0.62 | -0.01 | 0.19 | -0.22 | 0.13 | -0.04 | 0.09 | 0.49 | 0.24 | 0.38 | 0.51 | 0.63 | 0.69 | 0.44 | 0.79 | 0.61 | 0.32 | 0.39 | 0.72 | -0.13 | -0.46 | -0.29 | 0.82 | -0.18 | -0.14 | -0.68 | 0.34 | 0.59 | 0.7 | 0.21 | 0.24 | 0.91 | 1.39 |
| -0.21 | -0.81 | -1.04 | -0.6 | -3.51 | -4.42 | -0.82 | -0.33 | 0.51 | 0.44 | -0.21 | -0.01 | 0.53 | -0.21 | -0.79 | -2.5 | - | - | 0.48 | -0.64 | 0.53 | 0.01 | -0.19 | -1.46 | -0.98 | 0.15 | -2.2 | -0.63 | -1.06 | -1.67 | 0.6 | 0.07 | -0.38 | 0.74 | 0.55 | 0.76 | 0.28 | 0.49 | 0.33 | 0.29 | 0.85 | -0.3 | 0.39 | -0.73 | -1.05 | -0.66 | -0.34 | -0.16 | 0.04 | 0.6 | 0.89 | 0.89 | 1.1 | 0.53 | 1.13 | 1.37 | |
| 0.01 | -2.38 | -1.94 | -0.82 | -2.03 | -1.41 | -3.19 | -0.48 | 0.59 | 0.36 | -1.87 | -0.59 | -0.07 | -1.42 | -1.19 | -0.75 | - | - | 0.19 | -0.4 | 0.1 | -2.1 | 0.53 | -0.97 | -1.61 | -0.07 | -0.3 | -0.29 | -0.68 | -0.21 | 0.25 | 0.57 | 0.23 | 0.36 | 0.09 | -0.17 | 0.37 | 0.3 | 0.37 | 0.16 | 0.05 | -0.08 | -0.56 | -0.48 | 0.19 | -0.0 | -0.5 | 0.57 | 0.42 | 1.25 | 1.14 | 1.28 | 1.05 | 0.93 | 1.09 | 1.44 | |
| -1.12 | -1.23 | - | -0.91 | -3.43 | - | -4.49 | -0.72 | 0.12 | 0.23 | - | -1.06 | -1.13 | -1.87 | -1.26 | -2.47 | - | - | -0.39 | -1.45 | -0.67 | -2.06 | -1.89 | -1.6 | -0.48 | 0.52 | -2.9 | -1.6 | -1.56 | -1.47 | 0.75 | 0.53 | 0.97 | 0.81 | 0.67 | 0.88 | 0.47 | 0.41 | 0.68 | 0.74 | 0.59 | 0.21 | -0.86 | -0.58 | -0.34 | -1.0 | -0.49 | 0.1 | 0.39 | 1.24 | 1.47 | 1.55 | 1.36 | 1.31 | 1.54 | 1.72 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.