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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10425941g0010 (RPS1) | -1.24 | -0.62 | - | -4.65 | -6.26 | -7.49 | -2.9 | -3.25 | -2.81 | -6.45 | -3.66 | -4.34 | -4.19 | -3.87 | -4.77 | -3.69 | 3.87 | - | -5.67 | 1.5 | -1.74 | 1.36 | -0.94 | 1.2 | 2.73 | 0.38 | 1.97 | 2.22 | 1.65 | 1.92 | - | - | - | - | - | - | - | - | - | - | - | - | -2.9 | -2.87 | -2.03 | -1.42 | -0.42 | -0.31 | -0.11 | -0.77 | -0.86 | -0.57 | -0.69 | -0.05 | -0.62 | -2.58 |
| -2.93 | -3.59 | -1.19 | -0.67 | -0.03 | -0.1 | 1.36 | -3.81 | -2.76 | 0.15 | -2.17 | 0.14 | -1.12 | -0.71 | -0.52 | 0.42 | 3.48 | -0.75 | -0.3 | 1.16 | -2.76 | -0.32 | -4.76 | -0.02 | 0.45 | 0.62 | 1.13 | 1.27 | 0.89 | 1.05 | 0.28 | 0.26 | 0.04 | 0.16 | 0.22 | -0.05 | 0.1 | -0.58 | -0.12 | -0.46 | -0.05 | -0.41 | -3.12 | -3.84 | -2.6 | -3.46 | -0.03 | -1.42 | -1.0 | -1.81 | -1.69 | -1.35 | -1.64 | -1.66 | -0.93 | -3.96 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.