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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_159064g0010 (HB-4) | -2.39 | -4.31 | -1.77 | -1.29 | -1.62 | -0.05 | - | 0.7 | -2.36 | 1.04 | 4.03 | 2.27 | 2.92 | 2.28 | 1.73 | -1.02 | - | -2.96 | 1.23 | -6.34 | -1.4 | -2.57 | - | - | - | -4.28 | - | - | - | - | - | - | -4.51 | - | - | -4.96 | - | - | - | - | -5.77 | - | -1.47 | -2.45 | -1.93 | -4.13 | -3.43 | -0.94 | -0.81 | -1.03 | 1.0 | 1.01 | -1.09 | -1.56 | 0.91 | -6.61 |
MA_81351g0010 (HB-4) | -2.35 | -2.87 | -1.65 | -0.29 | -1.49 | 0.66 | -1.94 | 1.14 | -2.04 | 0.87 | 3.73 | 2.28 | 2.92 | 2.18 | 1.55 | -3.56 | - | -1.84 | 0.91 | - | -0.0 | -3.3 | -1.45 | - | - | -4.21 | - | - | - | - | - | - | -4.2 | -4.25 | - | -5.41 | - | - | -5.52 | - | - | - | -1.82 | -2.48 | -2.16 | -4.12 | -1.17 | -0.9 | -0.54 | -0.32 | 1.09 | 1.19 | -0.31 | -1.31 | 1.13 | -4.46 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.