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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | 0.58 | 1.38 | 1.82 | - | - | -1.76 | -3.59 | 3.16 | 0.11 | -0.56 | 1.51 | 2.87 | 0.18 | 1.39 | - | 1.77 | 2.48 | - | - | -2.81 | - | - | - | -0.16 | - | -0.87 | - | - | -1.94 | - | -2.7 | -2.76 | -2.67 | -0.61 | -1.72 | -1.86 | -1.57 | -2.13 | -0.74 | -0.73 | -1.43 | -2.56 | -0.24 | - | - | -2.82 | -1.81 | -1.59 | 0.35 | 0.21 | -0.16 | -0.13 | -0.14 | 0.79 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 1.95 | 2.84 | - | - | 1.38 | - | - | - | -2.21 | 1.44 | - | - | 1.2 | 4.29 | 0.78 | - | - | - | 2.53 | - | - | - | - | - | 2.88 | - | - | - | - | - | - | - | 1.01 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.49 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | 2.06 | - | - | - | - | - | - | 3.08 | - | 5.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.79 | -4.04 | -4.59 | -1.51 | -4.04 | - | - | -3.28 | -1.6 | 1.54 | -0.17 | 0.34 | 3.31 | 4.18 | 0.81 | -1.56 | - | - | 2.97 | -1.75 | -3.01 | 0.86 | -2.28 | -4.72 | -1.79 | 1.09 | -1.44 | -1.71 | -3.26 | -1.75 | -3.6 | -4.27 | -3.18 | -2.92 | -1.82 | -4.99 | -3.27 | -2.12 | -2.91 | -3.46 | -3.54 | -2.95 | - | -5.4 | -3.2 | -3.18 | 1.81 | -5.15 | -3.43 | - | - | - | - | - | - | -4.16 | |
MA_10397904g0010 (GER2) | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | -0.13 | - | - | - | - | -2.11 | 2.99 | - | -1.42 | -1.44 | 4.09 | -0.03 | - | - | - | 2.54 | 0.31 | - | - | - | -0.68 | -0.18 | 0.61 | - | - | 0.19 | -0.39 | 1.04 | - | 0.22 | 0.14 | -0.92 | 0.17 | - | - | -0.31 | - | 0.68 | - | -1.77 | -2.18 | -0.3 | 0.02 | - | - | -1.93 | -0.05 | -0.48 | - | 0.05 | -0.11 | -0.51 | -0.31 | |
MA_10435394g0020 (MES13) | -0.69 | -3.5 | 1.62 | 1.7 | 1.08 | 0.83 | 0.33 | -1.35 | -2.25 | 2.58 | -1.46 | -0.7 | 2.48 | 3.77 | -0.6 | 1.69 | - | 0.9 | 2.51 | -6.08 | 0.41 | -5.95 | 0.51 | - | -5.47 | -1.15 | - | - | -4.54 | - | - | - | - | - | - | -5.92 | - | - | - | - | - | - | -0.76 | -1.54 | -1.51 | -1.02 | -1.51 | - | -4.46 | - | -6.34 | - | -5.45 | -6.62 | - | -7.83 |
| - | - | - | - | - | - | - | - | - | 3.05 | - | 1.71 | - | 4.65 | 1.35 | - | - | - | 3.62 | - | - | - | - | - | - | 0.61 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.53 | - | - | - | - | |
| - | - | - | - | - | - | - | - | -3.82 | 3.41 | - | - | 3.16 | 4.58 | - | - | - | - | 2.8 | - | - | - | - | - | - | -1.32 | - | - | - | - | - | - | - | - | - | - | - | - | -0.73 | - | - | - | -0.89 | - | - | -0.33 | 1.26 | - | - | - | -0.52 | - | - | - | - | - | |
| - | - | 1.67 | 1.28 | 0.13 | - | - | -1.35 | - | 3.3 | 2.22 | -1.17 | 1.64 | 2.93 | 1.75 | 2.51 | - | 1.48 | 2.56 | - | - | -1.4 | - | - | - | -1.37 | - | - | - | - | -1.42 | - | - | - | - | - | - | - | -0.16 | - | -1.33 | - | -0.64 | - | -0.43 | - | - | -3.92 | -4.18 | -1.55 | - | - | - | -0.6 | -1.34 | -2.82 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.29 | 3.88 | - | - | - | - | - | - | - | - | - | - | 1.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 3.76 | - | - | - | 4.31 | - | - | - | - | 2.31 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.91 | - | 1.42 | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 3.76 | 5.23 | 2.31 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 3.76 | - | - | - | 4.31 | - | - | - | - | 2.31 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.91 | - | 1.42 | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | -1.19 | 1.24 | - | - | 3.41 | 4.53 | - | - | - | - | 2.7 | - | - | - | - | - | - | - | - | - | - | - | 1.94 | - | 2.13 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.24 | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.8 | - | - | - | - | - | - | - | - | - | - | - | -1.24 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | -0.49 | 1.31 | 1.79 | 0.78 | 0.42 | - | -0.24 | -4.04 | 2.47 | - | -2.1 | 2.54 | 3.47 | 0.65 | 0.72 | - | -0.46 | 2.11 | -1.43 | - | -2.34 | - | -0.4 | - | -1.32 | -0.29 | - | -1.54 | -0.44 | -2.25 | - | -1.32 | -0.49 | - | -2.14 | - | -2.39 | -2.55 | -0.04 | - | - | -0.86 | -0.25 | -1.04 | -1.25 | -1.2 | -1.67 | -0.65 | -2.7 | -0.39 | -1.36 | -1.45 | -0.87 | -0.25 | 0.26 | |
| - | - | - | 1.53 | 1.68 | - | - | - | - | 2.74 | - | - | 2.85 | 4.24 | 0.3 | - | - | - | 1.92 | - | - | 0.46 | - | 2.4 | - | -1.54 | - | - | - | - | - | 0.37 | - | 0.82 | - | - | - | - | - | 0.81 | - | - | - | - | - | - | - | - | -2.13 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | 0.93 | - | 1.82 | - | - | - | 3.82 | 0.58 | - | - | - | - | 0.6 | - | 0.78 | - | - | 3.25 | -1.04 | - | 1.72 | 1.59 | 2.68 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.93 | - | - | - | 1.8 | 0.72 | - | - | - | - | |
MA_189751g0010 (PFK5) | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | 1.87 | - | - | 3.58 | 5.34 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | -3.13 | 3.08 | - | 1.41 | 0.37 | 4.17 | -0.03 | - | - | - | 3.39 | 1.16 | - | - | - | - | - | -1.46 | - | - | - | - | -0.04 | - | - | - | - | 0.36 | 1.19 | - | 1.99 | - | - | - | - | - | 0.73 | - | - | - | -2.43 | 0.01 | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.15 | 4.35 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | 0.93 | - | - | - | - | -0.41 | 3.46 | -1.18 | - | -0.85 | 2.82 | 0.69 | 0.6 | - | - | 2.7 | 0.44 | - | - | - | -0.21 | - | -0.69 | - | - | - | -0.24 | -2.19 | -1.12 | -1.17 | - | -1.32 | 1.27 | -1.33 | 0.69 | -0.86 | - | -0.07 | 0.2 | 1.41 | -0.38 | -0.57 | - | -0.0 | -0.62 | -3.63 | 0.21 | 0.49 | -0.09 | -0.26 | -1.28 | 0.54 | -1.66 | |
| - | - | 0.82 | 1.38 | -1.03 | - | - | - | -0.78 | 2.82 | - | -1.05 | 1.33 | 4.02 | 1.15 | 2.67 | - | - | 2.36 | - | - | - | - | - | - | -2.92 | - | - | - | - | - | -0.22 | - | - | - | - | - | - | -1.19 | - | -1.17 | - | 0.37 | 1.58 | 1.06 | -0.06 | -0.11 | -3.53 | -2.7 | - | - | - | - | - | - | -1.87 | |
| - | - | - | 0.76 | - | - | - | - | - | 2.97 | - | - | 3.31 | 4.13 | - | - | - | - | 2.87 | - | - | - | - | - | - | -0.6 | - | - | - | - | - | - | - | - | - | -17.37 | - | - | - | - | - | - | 0.03 | - | - | -19.85 | - | - | - | 1.7 | 2.22 | 0.25 | -0.08 | - | - | - | |
| - | 4.81 | - | - | - | - | - | - | - | 0.39 | - | - | 2.22 | 4.42 | - | - | - | - | - | - | - | - | - | - | - | -1.01 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | 0.62 | - | 2.45 | -24.78 | 2.64 | - | 0.61 | 3.15 | 4.27 | - | - | - | - | 1.93 | 0.35 | - | - | - | - | - | -2.4 | - | - | - | - | -0.84 | - | 0.38 | - | 1.17 | - | - | - | - | - | 1.29 | - | - | - | - | - | - | -2.15 | - | -0.01 | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 2.89 | - | - | 3.66 | 3.98 | - | - | - | - | 2.9 | - | - | - | - | - | - | - | - | - | - | - | 1.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.26 | - | - | - | - | 2.48 | - | |
MA_467593g0010 (RAP2.12) | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | 2.19 | - | - | - | - | 2.19 | - | 1.99 | - | 5.2 | 1.63 | - | - | - | 1.58 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_619031g0010 (NUDT16) | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | 2.34 | 1.36 | - | - | - | -1.31 | 3.32 | - | - | 2.62 | 3.2 | 1.19 | - | - | - | 3.2 | - | - | - | - | - | - | -0.47 | - | 0.32 | - | - | - | - | -0.51 | - | - | - | - | - | 0.41 | -0.94 | 0.45 | - | 0.01 | - | - | - | - | -2.22 | -1.49 | 0.02 | - | -0.54 | -0.88 | -0.57 | -0.48 | - | |
| - | - | - | 0.69 | - | - | - | - | -2.93 | 3.73 | - | 2.41 | - | 3.48 | 2.45 | - | - | - | 3.48 | - | - | - | - | - | - | -0.7 | - | - | - | - | - | - | - | - | - | - | 0.65 | - | - | - | - | - | - | - | 1.19 | - | 1.76 | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.39 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.83 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | 0.7 | - | - | - | - | 2.37 | - | - | 3.34 | 4.23 | 1.95 | - | - | - | 2.96 | - | - | - | - | - | - | -2.02 | - | - | - | - | 0.99 | - | - | - | - | 1.02 | - | - | - | - | - | - | - | - | - | 1.1 | - | - | - | - | - | - | 1.16 | - | - | - | |
| - | - | - | - | 0.7 | - | - | - | - | 3.59 | - | 1.73 | 1.67 | 4.77 | 1.32 | - | - | - | 1.7 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.53 | - | - | |
| - | - | - | - | - | - | - | - | - | 2.27 | - | - | 2.64 | 4.85 | - | - | - | - | 0.48 | - | - | - | - | - | - | - | - | - | 3.27 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.32 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | 2.94 | - | - | - | - | - | 1.44 | - | - | 2.65 | 5.12 | 2.19 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | 4.21 | - | 4.93 | 2.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.69 | 0.9 | 1.32 | 0.78 | -0.02 | -2.37 | -0.03 | -0.71 | -0.64 | 3.46 | -3.68 | -1.43 | 1.22 | 3.38 | 0.37 | -1.32 | - | 0.81 | 2.82 | - | 1.52 | 0.35 | - | - | - | -2.96 | - | - | - | - | - | - | - | - | - | - | - | - | - | -3.31 | - | - | -0.71 | 0.22 | 0.42 | 1.29 | 0.49 | -5.93 | -6.32 | - | - | - | - | -2.75 | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.