View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
- | - | - | - | - | 1.25 | - | 1.06 | - | 0.49 | - | - | - | - | - | 5.15 | - | - | 0.32 | - | 3.05 | 1.99 | - | - | - | -1.1 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.58 | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | 3.39 | - | - | - | - | - | - | - | - | - | - | 5.51 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.68 | - | - | 2.13 | - | - | - | - | - | - | -1.37 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | 0.5 | 0.0 | -19.74 | -0.1 | - | -3.46 | 0.71 | - | 0.14 | -0.93 | - | - | 5.23 | - | - | 2.32 | -1.14 | - | 0.44 | - | 0.8 | - | -2.18 | - | - | - | -0.24 | - | - | - | - | - | - | - | - | -1.23 | - | - | - | - | - | - | -0.95 | - | -3.66 | -3.85 | - | -1.01 | -1.2 | - | - | - | -2.56 | |
- | -2.61 | -3.97 | - | -1.79 | 1.36 | -1.0 | -2.61 | -8.33 | -5.96 | -1.73 | -0.99 | 0.55 | -2.45 | -1.41 | 5.38 | - | 1.97 | -7.02 | -1.32 | -2.4 | -5.0 | -0.29 | - | - | -4.0 | - | - | -4.23 | - | -4.88 | - | - | - | - | -3.56 | -3.57 | - | - | - | - | - | -2.73 | -1.32 | - | - | - | -0.96 | -0.54 | - | -4.15 | -5.1 | -4.22 | - | -2.93 | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
-1.45 | -2.68 | - | -2.72 | -3.43 | -2.15 | 0.22 | -1.1 | -4.36 | -2.52 | -0.52 | 0.85 | 1.6 | 0.59 | -0.51 | 4.79 | - | 2.91 | -0.92 | -0.89 | 0.02 | -2.55 | - | - | - | -1.33 | - | - | -1.64 | - | -1.25 | -3.5 | -1.32 | -4.36 | -1.19 | -1.36 | -4.38 | -1.97 | -1.08 | -0.69 | -0.78 | -2.32 | -3.19 | -4.36 | -2.76 | -3.6 | -0.27 | -0.31 | 0.3 | - | - | - | - | - | -4.08 | - | |
- | - | - | - | -5.71 | -1.68 | 0.76 | -5.13 | -0.63 | -0.92 | -2.19 | -4.07 | -3.49 | -3.13 | -3.88 | 4.74 | - | 0.88 | -0.79 | -1.16 | 3.14 | -5.28 | 2.18 | -1.35 | -0.7 | - | 0.01 | -3.34 | -4.48 | -1.58 | -1.53 | -1.34 | -2.66 | -0.85 | -2.06 | -1.19 | -5.25 | -2.73 | -2.73 | -2.86 | -0.09 | -3.66 | 0.41 | -0.02 | - | -0.78 | -2.14 | -6.67 | -5.2 | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.8 | 5.71 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | 1.21 | - | - | - | -3.2 | - | - | - | - | - | - | 5.29 | - | - | - | - | - | - | - | - | - | - | - | 1.24 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.05 | 1.31 | 0.38 | 0.33 | 1.2 | 1.41 | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | 2.63 | - | - | 5.64 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | 2.2 | - | - | - | - | - | - | - | - | - | 5.68 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.69 | - | - | 2.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | 2.77 | - | - | - | - | - | - | - | - | - | - | - | 1.55 | 5.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.44 | - | - | - | |
- | - | 1.52 | - | 2.72 | - | - | - | - | -1.02 | - | 0.71 | - | - | 2.58 | 5.2 | - | - | -1.53 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.51 | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.43 | 5.7 | - | - | 0.23 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
-4.42 | -0.95 | - | - | -7.57 | -1.18 | -0.37 | -6.82 | -0.74 | -0.79 | -0.89 | -1.37 | -0.16 | -0.68 | -0.79 | 4.99 | - | 1.65 | -1.33 | 0.24 | -0.45 | -1.92 | -4.33 | 1.05 | -0.08 | -1.89 | -0.16 | 0.02 | 0.56 | 0.29 | -5.07 | -3.63 | -4.96 | -5.28 | -5.29 | -3.68 | - | -3.88 | -3.97 | -5.05 | -3.2 | -4.92 | -4.08 | -4.1 | -4.52 | -3.01 | -2.24 | 0.03 | 0.21 | -3.67 | -1.5 | -1.07 | -3.44 | -2.81 | -2.77 | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_23072g0010 (RBP45B) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.62 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.73 | - | - | - | - | - | - | - | - | - | - | - | - | - |
- | - | - | - | - | - | - | - | - | - | - | 2.03 | 2.12 | - | - | 5.57 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | 0.3 | - | 0.44 | -1.04 | - | - | -1.73 | - | - | 5.09 | - | 0.13 | -0.99 | 0.27 | 3.23 | - | 1.2 | - | - | - | - | - | -2.74 | - | -2.94 | -1.32 | -1.94 | - | - | -2.53 | -3.74 | -2.85 | -3.31 | - | - | - | 0.49 | -0.5 | - | -1.41 | - | -6.11 | -3.77 | - | - | - | - | - | - | - | |
- | - | -8.89 | - | -8.52 | -3.56 | 0.41 | -9.81 | -10.67 | -3.84 | - | - | -9.75 | - | - | 5.61 | - | 2.24 | -1.73 | - | -6.32 | - | - | - | - | -9.93 | - | - | - | - | -5.41 | -5.54 | -5.72 | -5.62 | -5.6 | -5.77 | -7.23 | -6.11 | -4.55 | -5.46 | -5.39 | -6.51 | - | - | - | - | - | -8.31 | -5.22 | -4.68 | -4.89 | -6.04 | -4.28 | -5.32 | -6.84 | - | |
MA_43689g0010 (SNL3) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.65 | 5.57 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.18 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
- | - | - | - | 2.54 | - | - | - | - | - | - | - | - | - | - | 5.65 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | -1.12 | 3.58 | - | -1.27 | -2.22 | - | - | - | - | - | 5.33 | - | 0.93 | -2.15 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.19 | - | - | - | - | - | - | -3.89 | - | - | - | - | - | - | - | |
- | - | - | - | 1.57 | - | - | - | - | 0.8 | - | - | - | - | - | 5.68 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | 2.32 | - | - | - | 5.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
-1.2 | -0.31 | -1.45 | -2.23 | -1.4 | 0.44 | 0.8 | 1.39 | -0.67 | -2.08 | 0.45 | -1.65 | -0.17 | -1.9 | -2.85 | 4.24 | - | 0.96 | -1.86 | -0.71 | 1.45 | -0.3 | 0.28 | -0.85 | 0.16 | -2.06 | 0.51 | 0.37 | -0.21 | 0.67 | -2.19 | -3.53 | -1.55 | -1.46 | -1.58 | -1.5 | -1.98 | -1.63 | -2.69 | -1.93 | -1.56 | -1.98 | -0.91 | -1.52 | -1.25 | -1.94 | -0.3 | 0.03 | -0.31 | -0.84 | -0.9 | -1.32 | -1.01 | -0.7 | -0.87 | -5.69 | |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | 1.78 | - | - | - | - | - | - | - | - | - | - | 5.31 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.7 | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | 2.07 | - | - | 1.94 | - | - | 5.58 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
- | - | - | - | - | - | - | - | - | - | - | - | 2.17 | - | - | 5.42 | - | - | 0.31 | - | - | - | - | - | 2.86 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_94599g0010 (SWEET3) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.