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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10434451g0010 (HXK1) | -0.02 | 0.7 | - | -3.63 | -5.66 | -8.6 | - | -1.07 | -0.2 | -2.24 | - | -2.92 | -3.27 | -3.92 | -2.62 | - | - | - | -2.52 | -0.1 | -1.26 | -0.04 | -0.35 | -0.38 | 0.28 | 0.3 | 0.46 | 0.72 | 0.65 | 0.78 | 1.21 | 1.55 | 1.15 | 1.23 | 1.18 | 0.82 | 1.4 | 1.12 | 1.05 | 1.03 | 1.13 | 0.82 | -0.12 | 0.88 | 1.06 | -0.2 | 0.02 | -1.07 | -0.73 | -0.88 | -0.96 | -0.48 | -1.54 | -1.19 | -0.2 | -1.08 |
MA_133711g0010 (HXK1) | -0.13 | 0.94 | -3.67 | -1.77 | -4.11 | -3.06 | - | -1.29 | -0.56 | -2.39 | -1.89 | -3.2 | -3.27 | -1.54 | -2.57 | -3.99 | - | - | -2.82 | 0.28 | -0.99 | 0.16 | -0.21 | -0.51 | 0.57 | 0.46 | 0.53 | 0.76 | 0.49 | 0.76 | 1.15 | 1.46 | 1.05 | 1.31 | 1.2 | 0.92 | 1.31 | 1.02 | 1.15 | 0.82 | 1.15 | 0.8 | -1.19 | -0.16 | 0.98 | -0.1 | -0.13 | -1.8 | -1.08 | -0.64 | -0.81 | -0.46 | -0.91 | -0.93 | 0.18 | -1.16 |
MA_203340g0010 (HXK1) | -0.07 | 1.38 | -2.66 | -2.26 | -3.1 | -4.14 | -4.27 | -0.88 | 0.17 | -4.11 | -0.98 | -3.3 | -2.99 | -1.19 | -2.69 | -4.41 | - | -4.43 | -4.14 | 0.38 | -0.52 | 0.55 | -0.81 | -0.63 | 0.28 | 0.91 | 0.71 | 1.1 | 0.64 | 1.04 | 0.9 | 1.01 | 0.76 | 0.9 | 0.78 | 0.54 | 0.94 | 0.83 | 0.86 | 0.6 | 0.78 | 0.47 | -0.13 | 0.68 | 1.03 | -0.03 | 0.36 | -1.43 | -0.9 | -0.54 | -0.59 | -0.04 | -0.84 | -0.89 | 0.25 | -1.33 |
MA_422806g0010 (HXK1) | 0.89 | 1.55 | -4.91 | -6.49 | - | - | - | -1.05 | -0.77 | -2.29 | - | -2.95 | -3.91 | -3.5 | -2.45 | - | - | - | -2.97 | 0.06 | -0.79 | 0.59 | 0.36 | -0.26 | 0.97 | 0.94 | 0.67 | 1.18 | 1.3 | 1.18 | 0.75 | 0.67 | 0.91 | 0.79 | 0.93 | 0.75 | 0.62 | 0.67 | 0.81 | 0.88 | 0.33 | 0.35 | -0.42 | 0.74 | 0.81 | 0.44 | 0.45 | -2.32 | -2.44 | -0.7 | -0.71 | -0.29 | -0.94 | -1.03 | -0.09 | -0.78 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.