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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10429756g0020 (GGPS1) | - | - | - | - | - | - | 5.65 | - | -2.18 | - | - | - | - | - | - | 1.77 | - | - | - | - | - | - | - | - | - | 0.61 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.5 | - | - | - | - | - | - | - |
| - | - | - | - | - | - | 5.43 | - | -3.24 | - | - | 0.3 | 1.34 | - | - | - | - | - | - | - | - | - | - | - | - | 1.21 | - | - | - | - | - | - | 0.04 | - | - | 0.96 | - | - | - | 0.41 | - | - | -0.08 | -0.92 | - | - | - | - | - | -0.09 | - | - | - | - | - | - | |
| 0.28 | - | 1.39 | - | 1.12 | 0.43 | 5.0 | - | - | - | - | 1.15 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.61 | 1.36 | 1.26 | - | - | - | - | - | -0.32 | - | -0.48 | - | - | - | 0.0 | - | - | - | - | - | - | - | 0.85 | 0.68 | - | - | - | - | - | - | -1.14 | |
MA_39836g0010 (TDF1) | - | - | - | - | - | - | 4.87 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.76 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.26 | - | - | 4.39 | - | - | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.