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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | 2.75 | 2.79 | 3.91 | 4.7 | - | - | - | - | - | -1.4 | - | - | - | -0.7 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.85 | - | - | - | |
| - | - | - | -0.72 | 0.86 | 4.23 | - | - | - | 0.33 | - | 3.98 | 1.75 | 1.04 | 2.76 | - | - | 1.16 | 0.28 | - | - | - | - | - | - | -4.48 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.05 | - | - | - | - | - | -0.45 | - | - | - | - | -0.2 | - | |
| - | - | - | 1.57 | 1.78 | 4.31 | 3.61 | - | - | 2.1 | 2.47 | - | - | 2.11 | - | - | - | - | 1.76 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.79 | - | -0.4 | 2.87 | 1.99 | 3.34 | - | - | -4.98 | 2.24 | -0.13 | -0.5 | 1.52 | -1.71 | -0.93 | - | - | 2.23 | 1.59 | - | - | - | - | - | 0.14 | -0.84 | - | - | - | - | - | - | - | -0.69 | - | -1.54 | -0.42 | - | - | -0.9 | 0.35 | -1.8 | - | - | - | - | - | -4.27 | - | 1.54 | -1.49 | 2.04 | -0.13 | -0.81 | 0.08 | - | |
| -0.79 | - | -0.4 | 2.87 | 1.99 | 3.34 | - | - | -4.98 | 2.24 | -0.13 | -0.5 | 1.52 | -1.71 | -0.93 | - | - | 2.23 | 1.59 | - | - | - | - | - | 0.14 | -0.84 | - | - | - | - | - | - | - | -0.69 | - | -1.54 | -0.42 | - | - | -0.9 | 0.35 | -1.8 | - | - | - | - | - | -4.27 | - | 1.54 | -1.49 | 2.04 | -0.13 | -0.81 | 0.08 | - | |
| - | - | 0.11 | -1.3 | 1.39 | 3.02 | 3.17 | - | -3.34 | 1.16 | - | 2.67 | -0.76 | 1.05 | 1.46 | 0.79 | - | - | -1.34 | - | - | - | - | - | - | -2.93 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.61 | - | - | -1.99 | - | - | - | - | 1.81 | 1.52 | 1.24 | 1.52 | 1.2 | 1.95 | - | |
| - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.67 | -0.41 | -0.15 | 1.34 | 0.38 | 2.92 | 1.86 | -1.93 | -2.02 | 0.84 | -1.16 | 0.11 | 0.69 | 0.43 | -1.65 | 0.53 | - | 0.47 | 1.03 | -1.46 | -1.16 | -1.6 | -3.16 | 0.12 | 0.53 | 0.38 | -3.0 | -0.58 | -1.1 | -1.96 | -1.27 | -3.85 | -1.38 | -1.47 | -0.81 | -1.4 | -1.95 | -0.54 | -1.53 | -1.69 | -0.19 | -3.86 | -3.36 | -2.96 | -1.67 | -0.81 | 0.61 | -1.59 | -0.94 | 0.53 | 1.23 | 1.14 | 0.71 | 0.5 | 1.31 | -0.55 | |
| - | - | - | - | - | 5.35 | - | - | - | - | - | 3.09 | - | - | 2.36 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.68 | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | 5.44 | - | - | - | 2.16 | - | - | - | - | - | - | - | - | 2.55 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.23 | - | - | - | - | 0.98 | - | - | |
| -1.19 | -1.3 | 1.09 | 2.21 | 1.51 | 3.24 | - | -3.02 | -6.42 | 1.39 | -0.26 | -1.91 | -1.63 | -1.72 | -2.36 | 1.03 | - | 2.19 | 1.01 | -0.57 | - | - | - | - | - | -1.45 | - | -0.26 | - | - | -1.52 | -1.96 | -1.97 | -0.36 | -3.15 | -0.73 | -0.49 | 0.28 | -2.0 | -1.42 | -0.42 | -0.71 | - | - | - | -2.96 | - | -3.4 | -2.53 | 1.09 | 1.16 | 0.93 | 0.77 | 1.5 | 1.6 | -1.04 | |
| - | - | - | - | - | 4.38 | - | - | - | 4.03 | - | 1.77 | - | - | - | - | - | - | 3.7 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.3 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.26 | -1.25 | 1.2 | 2.44 | 0.23 | 2.85 | - | -1.37 | -1.71 | 2.45 | -1.58 | 0.9 | 1.37 | -0.67 | -0.27 | - | - | 1.12 | 2.63 | -0.24 | -1.89 | -2.06 | -1.98 | -0.93 | - | -0.94 | -2.0 | -2.13 | -2.17 | - | 0.09 | -0.05 | -1.85 | -0.16 | -0.47 | -0.22 | 0.03 | -0.07 | 0.35 | 0.94 | 0.36 | -2.72 | -1.5 | -1.58 | -1.69 | -1.75 | - | -3.08 | -2.31 | -1.04 | -1.84 | -2.07 | -1.3 | -2.31 | -1.57 | -2.21 | |
MA_10436089g0040 (RLP41) | - | - | -0.64 | - | 2.4 | 4.65 | 3.58 | - | -3.48 | 1.03 | - | 1.11 | 0.14 | -2.16 | -0.3 | - | - | 1.17 | 0.12 | - | - | - | - | - | - | -2.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.59 | - | - | -2.25 | -1.7 | -1.07 | -1.82 | -1.63 | - | - | - | - |
| -1.26 | 0.22 | 1.66 | 0.78 | 0.05 | 3.09 | - | 0.21 | -0.57 | 0.63 | 1.61 | 0.84 | -0.42 | 1.36 | 0.59 | -1.47 | - | -1.34 | 1.03 | 0.37 | 1.42 | -0.61 | -1.16 | - | -0.33 | 0.29 | 1.64 | - | -0.41 | - | -2.35 | - | -2.2 | -1.1 | -1.96 | -2.02 | - | -1.47 | -1.02 | - | -0.6 | -2.27 | -0.33 | -0.53 | 0.57 | 1.01 | -1.08 | -1.86 | -1.6 | -1.3 | -1.27 | 0.37 | -2.33 | -1.42 | -1.12 | -0.13 | |
| - | - | - | - | - | 4.53 | - | 2.08 | - | 3.5 | - | 2.19 | - | - | 2.72 | - | - | - | 1.01 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.06 | - | - | - | - | - | |
| - | - | - | 1.14 | 1.5 | 3.65 | 4.4 | 2.12 | -4.55 | - | -1.2 | 0.66 | 0.08 | 1.73 | 1.47 | - | - | - | -2.78 | - | - | -1.13 | - | - | - | -3.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.05 | - | - | 1.02 | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | -0.49 | 2.55 | 4.83 | - | - | - | - | - | 3.19 | -0.03 | -0.61 | 1.95 | - | - | - | 0.28 | - | - | - | - | - | - | - | - | - | 0.6 | - | -1.26 | - | - | - | - | - | - | 0.49 | - | - | - | - | -0.58 | -1.19 | - | - | - | -1.49 | - | - | - | - | - | - | - | -1.69 | |
| -0.12 | 0.19 | -0.01 | 1.32 | 0.29 | 1.96 | 0.7 | - | -1.23 | 1.72 | 1.42 | -0.85 | 1.66 | 1.22 | 0.33 | 2.09 | - | - | 1.41 | -0.7 | 0.72 | -0.66 | -1.6 | -0.72 | -1.78 | 0.14 | - | -0.72 | -0.85 | -0.18 | - | - | - | - | -2.51 | - | - | - | - | - | - | - | -2.8 | - | 0.41 | -0.31 | 0.07 | -2.28 | -1.06 | 0.48 | 1.16 | 0.54 | 0.71 | 0.2 | 1.68 | -0.86 | |
| - | - | 0.37 | 2.01 | 1.69 | 3.35 | - | - | - | 1.86 | -3.3 | - | -0.96 | -2.18 | -0.87 | 1.86 | - | 3.77 | 0.96 | - | - | - | - | - | - | -0.45 | -0.65 | - | - | - | 0.37 | 0.46 | -0.53 | 0.93 | 1.02 | 0.15 | -0.04 | - | - | -0.35 | -0.76 | -0.75 | - | - | -1.72 | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
MA_151462g0010 (NF-YB13) | - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| - | 3.7 | - | - | - | 5.33 | - | - | - | - | - | 1.11 | - | - | - | - | - | - | -0.77 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 0.75 | - | - | - | - | 5.57 | - | - | -1.1 | - | - | 1.05 | - | 1.35 | -0.36 | - | - | - | - | - | - | -0.21 | - | - | - | -3.56 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 1.19 | - | 1.3 | -0.7 | 1.03 | 4.91 | - | 1.28 | - | -0.69 | - | - | - | - | - | 2.97 | - | - | 0.09 | - | 1.28 | - | - | - | - | -0.38 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | 0.24 | - | - | -0.04 | - | - | |
| - | - | - | 3.13 | 1.14 | 5.12 | 2.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 | - | - | 0.8 | - | |
| - | - | - | - | - | 5.42 | - | - | -1.39 | - | 1.78 | - | - | - | 1.66 | - | - | - | 1.4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.89 | - | - | - | - | |
| - | - | - | - | - | 5.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | 4.63 | - | - | - | 4.68 | - | - | - | - | - | - | - | - | 1.58 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.36 | |
| - | - | - | 1.52 | 2.75 | 3.13 | 3.49 | - | - | -1.09 | - | 3.58 | 1.25 | - | 1.85 | 3.0 | - | - | - | - | - | - | - | - | - | -3.69 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | 0.06 | 2.4 | 3.01 | 1.61 | 4.41 | 2.84 | 0.31 | -5.72 | - | - | - | - | -2.76 | - | 0.37 | - | - | - | - | -1.31 | -0.74 | - | 0.89 | - | -1.95 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.73 | - | - | - | - | - | - | - | - | - | 1.91 | |
| - | - | - | - | 0.98 | 5.64 | - | - | - | - | - | 2.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | 5.44 | - | - | - | 2.5 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.11 | - | - | - | - | - | 1.13 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.96 | 1.16 | - | |
| - | - | - | - | - | 5.17 | - | 3.52 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.46 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.3 | - | - | - | - | -1.15 | 1.53 | - | - | - | - | - | - | - | |
| - | - | - | 1.58 | 2.57 | 3.96 | 3.86 | - | -5.57 | 0.55 | - | 2.55 | -0.86 | -0.95 | 0.87 | - | - | 2.33 | -1.33 | - | - | - | - | - | - | -4.58 | - | - | - | - | - | - | - | - | - | -2.24 | - | - | - | - | -1.2 | - | -3.25 | - | - | - | - | -3.78 | - | - | - | - | - | -2.27 | - | -2.06 | |
| - | - | 4.1 | 1.88 | 2.58 | 4.51 | - | - | - | - | - | - | - | 2.13 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.01 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | -0.01 | 2.87 | 2.12 | 2.53 | 3.39 | - | 1.64 | - | -3.98 | - | -2.25 | -0.65 | 1.45 | -1.61 | - | - | - | -3.86 | -0.86 | 0.19 | -1.41 | -1.39 | - | -1.56 | -1.21 | 1.77 | -0.51 | 0.94 | -1.55 | - | - | - | - | - | - | -1.52 | - | - | - | - | - | -0.97 | -1.43 | 0.93 | 0.33 | 1.28 | -0.54 | 0.11 | - | - | - | - | - | - | 0.84 | |
| - | - | - | - | -0.04 | 5.05 | 4.29 | - | - | - | - | - | - | - | - | 1.19 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | 0.87 | 2.82 | 1.65 | 4.03 | 3.77 | - | 3.65 | - | -3.04 | - | - | - | - | -1.76 | - | - | - | - | - | - | - | - | - | - | -4.59 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.68 | - | - | - | - | - | - | -0.45 | |
| - | - | 0.44 | 1.9 | 1.14 | 3.93 | 4.8 | - | - | 0.18 | - | 1.19 | - | 0.57 | -0.78 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | -5.38 | 2.23 | 2.19 | 4.82 | - | - | - | - | - | 1.42 | 2.39 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.4 | |
| - | - | - | - | 0.8 | 5.26 | - | - | - | - | - | 1.98 | 0.87 | 1.72 | 1.98 | - | - | - | -1.4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.64 | 0.12 | |
| - | - | -5.38 | 2.23 | 2.19 | 4.82 | - | - | - | - | - | 1.42 | 2.39 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.4 | |
| - | - | - | - | - | 3.96 | - | - | -2.99 | - | 1.93 | - | 2.24 | 2.6 | 1.27 | - | - | 4.48 | - | - | - | - | - | - | - | -3.74 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.13 | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | 5.24 | - | 2.78 | - | - | - | - | - | - | 2.42 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.6 | - | - | - | - | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.