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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10115334g0010 (CYP78A9) | - | - | -3.74 | - | -3.62 | - | - | 1.94 | 0.44 | 1.41 | - | - | - | - | - | - | - | - | 0.73 | -3.13 | - | 0.63 | -4.76 | 2.05 | -0.02 | -3.02 | 0.66 | 0.71 | -0.54 | -0.05 | 1.0 | 1.21 | 1.4 | 1.65 | 2.06 | 1.38 | 1.68 | 1.04 | 1.54 | 1.51 | 0.82 | 1.53 | -1.76 | -2.03 | -4.02 | -3.67 | -0.15 | -2.35 | -2.28 | - | - | - | - | - | - | -7.25 |
MA_3784949g0010 (CYP78A6) | - | - | - | - | - | - | - | 1.23 | 0.31 | 2.13 | - | - | - | - | - | - | - | - | 2.03 | -0.44 | - | 0.48 | - | 2.41 | - | -3.21 | 0.2 | 2.55 | 0.96 | - | 1.03 | -0.94 | 1.17 | 1.01 | 1.42 | 0.97 | 2.06 | 0.48 | 0.81 | 1.15 | -0.32 | 1.92 | -1.99 | - | - | - | 0.3 | -3.25 | -4.49 | - | - | - | - | - | - | -2.29 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.