Heatmap: Cluster_119 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g14180.1 (LOC_Os01g14180)
1.55 1.84 2.5 - - -2.82 -2.77 -5.64 4.82 - -2.68 -4.05 - -0.33 - - 1.33 -4.93 2.01 - - -5.93 - - - - - - - - - -4.34 - - - - - - - - - -5.06 - - - - - -0.87 -
LOC_Os01g14200.1 (LOC_Os01g14200)
-1.97 0.93 -2.56 0.55 2.31 2.86 -1.88 -2.1 4.73 -8.84 -3.46 0.68 - -3.06 - -2.66 -6.61 -5.93 - -4.15 -3.44 -6.04 -3.61 -2.59 -2.12 -2.17 -2.55 -2.05 -3.09 -2.63 -3.94 -1.16 -2.97 - -2.82 -3.4 -3.74 -2.86 -2.04 -4.9 -5.52 -4.57 -4.32 - -1.12 -0.97 - - -
LOC_Os01g24730.1 (LOC_Os01g24730)
-0.84 0.39 -3.76 - -1.66 -2.24 - - 4.82 - -1.54 3.71 - - - - -3.06 -1.25 1.22 -2.79 - -5.36 -4.27 - - - - - - - - - - - - - - - - - - - -4.31 - -1.09 -1.85 -0.74 -2.12 -
LOC_Os01g24740.1 (LOC_Os01g24740)
-1.23 -0.09 -2.55 - -2.53 - -3.22 -5.22 4.06 -4.46 -0.69 3.35 - - 1.16 - -3.41 0.12 0.84 -0.22 -5.67 -0.95 -4.85 -0.74 1.6 0.09 -0.2 - - - - -3.9 - - - - - - - -5.72 -5.91 - -4.71 -4.91 1.94 1.75 - - -
LOC_Os01g35330.2 (LOC_Os01g35330)
-8.59 -6.12 0.35 -4.58 -4.26 -4.33 -2.91 -3.74 2.03 -2.8 1.86 -2.11 2.41 3.59 0.14 0.51 0.03 -3.6 - -0.18 -3.84 -7.61 -5.47 -7.96 -2.24 -6.71 -6.58 -4.62 -4.27 -4.37 -5.12 -4.51 -4.73 -4.36 -6.1 -4.86 -3.27 -6.66 -3.36 -6.2 -3.82 -4.72 -4.45 1.83 2.45 2.85 -5.9 -7.07 -4.12
LOC_Os01g36510.1 (LOC_Os01g36510)
- 2.6 - - - - - - 3.67 - - - - 4.69 - - -3.83 - - - -4.27 -3.88 - -0.93 - 0.44 - - - - - 1.21 - - - - - - - - - - - - - - - - -
LOC_Os01g37580.1 (LOC_Os01g37580)
-6.96 -1.71 - - - -6.42 -4.73 -8.93 5.12 -6.38 -3.33 -6.71 -4.63 3.73 - - - -5.43 - -6.69 -6.64 -7.87 -7.94 -5.97 - -7.07 -5.87 - - -5.73 - -4.04 - - - -6.7 -6.6 - -6.89 -6.53 -3.56 -5.97 -3.48 -9.96 - - - - -
LOC_Os01g52430.1 (LOC_Os01g52430)
-2.77 1.28 -3.97 -2.24 0.79 1.63 -1.29 -2.05 3.67 -1.35 -0.14 -1.26 -4.17 4.44 -2.57 -2.24 -2.59 -3.51 - -1.2 -5.65 -4.05 -5.51 -3.54 -4.54 -0.61 -0.67 -5.73 - -4.49 - 0.12 -5.48 - -4.65 - -5.61 -4.08 - -7.96 -5.65 -5.82 -5.18 -2.75 -2.58 -3.69 -5.84 -4.73 -5.54
LOC_Os01g60150.1 (LOC_Os01g60150)
-1.79 2.02 -0.16 -1.45 -0.62 1.6 -0.03 0.65 3.17 -0.35 -3.85 - - 4.55 - - -1.94 -2.29 - -1.29 - - - -3.78 - - - - - - - - - - - - - - - - - - - 0.7 - -0.75 -0.4 - -
LOC_Os01g60590.1 (LOC_Os01g60590)
-3.77 1.38 - - - 3.63 - - 3.97 -4.46 -1.7 -0.45 -0.33 2.9 - - -4.37 -4.38 - -3.59 -3.35 - -4.67 -1.87 0.5 - -1.23 - - 0.24 -0.92 1.27 - -0.48 - - - - - -4.79 -4.92 -3.83 -2.26 -4.09 -1.21 -1.28 -26.72 -22.61 -1.39
LOC_Os02g01850.1 (LOC_Os02g01850)
-0.03 2.76 -1.48 0.45 - 1.59 -2.54 1.77 3.06 -0.78 0.1 - - 4.35 - - 0.29 -0.92 - - - - - -1.77 - - - - - - - - - - - - - - - -3.12 - -1.75 - -3.61 - - - - -
LOC_Os02g06310.1 (LOC_Os02g06310)
-0.88 1.66 -2.79 -1.73 -1.36 - -3.65 -3.47 3.42 0.91 2.28 -0.55 -0.25 3.37 - - 0.73 0.12 2.07 -2.78 -3.23 - - -1.84 - 0.71 - - - - - -0.46 -0.54 - - - - - -0.96 - - - - -2.44 - - - 0.33 1.31
LOC_Os02g18790.1 (LOC_Os02g18790)
-2.23 3.21 - -0.31 -0.87 - - - 4.12 3.29 3.02 - - - - - 1.54 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os02g24940.1 (LOC_Os02g24940)
- 0.29 -5.95 - -5.85 - - - 3.92 -4.72 -2.79 - -4.91 4.97 - - - - - - - - - -4.37 - -3.87 - - -3.01 - - -2.86 -2.34 - - -2.59 - - - -3.09 -5.46 -6.11 - - - - - - -
LOC_Os02g25150.1 (LOC_Os02g25150)
-2.03 -0.07 -1.01 -4.24 - -1.23 -1.91 -2.08 4.21 -0.51 0.93 - -1.7 2.94 - - 0.77 -0.92 - -1.12 -3.53 -3.04 -3.63 -2.59 0.97 - - - - - - -2.78 - - - -1.89 - - - -4.4 -3.15 -3.63 - -1.45 - - 2.15 1.74 1.76
LOC_Os02g32310.1 (LOC_Os02g32310)
-1.21 3.06 - - - - 2.02 2.59 4.15 - -3.6 - 0.9 0.22 - - - 1.34 - - - -1.94 - - - - - - - - - - - - - - - - - - - - - - 0.62 2.31 - - -
LOC_Os03g01560.1 (LOC_Os03g01560)
2.0 3.56 - - - - - - 4.02 2.4 0.29 2.67 1.33 - - - - -2.32 - - -1.34 - -1.5 - - - - - - - - - - - - - - - - -1.17 -1.68 - - - - - - - -
LOC_Os03g17820.1 (LOC_Os03g17820)
0.8 0.62 - -0.06 -0.53 4.59 -0.14 - 3.72 - -4.09 - - 1.07 - - - - - - - - - - - - - - - - - 1.75 - - - - - - - - -1.58 - - - - - - - -
LOC_Os03g19770.1 (LOC_Os03g19770)
-2.31 2.56 - - - - - - 5.38 - -4.35 - - - - - - -2.56 - -3.21 - - - -3.44 - - - - - - - -2.13 - - - - - - - - - - - - - - -0.51 - -
LOC_Os03g25910.1 (LOC_Os03g25910)
1.12 3.05 -2.54 - - - 3.02 0.64 4.15 -1.68 2.58 - - 1.24 - - 1.03 - - - -2.67 -3.12 - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os03g61430.1 (LOC_Os03g61430)
-0.39 2.8 -2.93 - - - - -2.83 4.51 - - - - - - - - -4.03 - -1.77 - - - - - - - - - - - - - - - - - - - - - - - 0.09 2.11 0.17 3.5 - -
-2.57 3.0 - - -2.88 - - - 4.3 -0.42 -0.25 1.09 - - - - - -1.04 - - -2.1 -4.18 -0.79 - 0.92 -0.56 - - - - - 1.41 - 0.25 - - - - - 1.12 0.33 2.29 0.17 -2.94 - - - - -
-5.39 -1.16 -2.82 - -2.1 3.24 -3.62 -2.84 4.87 -5.25 -3.11 -6.18 - 2.67 - -3.4 -1.36 -7.25 -25.85 0.37 -6.94 -8.1 -8.03 -6.4 - -0.92 -1.76 - - - - -3.45 - - - - - -4.81 - -8.32 - -7.4 -7.29 -4.35 - - - - -25.16
LOC_Os05g10750.1 (LOC_Os05g10750)
-2.05 2.78 -1.4 1.44 1.72 -1.12 -2.53 -3.52 4.14 - - - - 4.08 - - - - - -3.21 - - - - - - - - - - - - - - - - - - - - - - - -3.6 - - - - -
LOC_Os05g11230.1 (LOC_Os05g11230)
-2.63 3.44 - 2.91 -0.41 - 1.3 -0.01 4.5 - - - - - - - - 1.88 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os05g11370.1 (LOC_Os05g11370)
-7.27 -1.53 -7.23 - - - -3.4 -1.67 4.05 -6.24 -7.89 - 3.05 2.95 - - -5.05 2.92 - -4.54 -2.29 -7.2 -2.87 -5.77 - -4.6 - -1.42 -3.3 -0.44 -1.65 -1.49 -2.79 -2.81 -1.4 -1.19 -1.69 -1.5 -2.31 - -9.08 -8.03 -4.56 -1.27 -1.03 -0.99 0.78 -0.81 -4.09
LOC_Os05g32490.1 (LOC_Os05g32490)
-0.81 2.98 -1.37 - - - - - 4.33 - -1.85 - - 3.1 - - - - - -1.91 - -3.63 - - - 3.0 1.28 - - - - -1.48 - - - - - - - - - - - - - - - - -
LOC_Os05g32750.1 (LOC_Os05g32750)
-5.68 0.82 - -3.06 0.05 2.87 - 0.2 - 2.08 2.53 3.53 - - - - -2.7 -5.23 - 1.5 - -4.53 -5.06 1.41 - 1.79 1.81 - - - - -1.57 - - - - - - - -4.39 -2.22 - -1.67 -0.43 - - 0.78 - -
LOC_Os05g36240.1 (LOC_Os05g36240)
-4.78 -2.41 -0.41 -5.8 - -0.82 -3.48 -3.23 3.36 1.83 2.0 -5.68 -1.59 4.44 -2.23 0.81 -0.28 -2.96 -2.33 -3.31 - -4.94 -9.09 -9.21 - -1.62 -3.25 - - - - -4.68 - - - -4.2 - - - -7.41 -4.12 -8.0 -6.99 -1.6 0.28 0.92 -3.64 - -5.57
LOC_Os05g48100.1 (LOC_Os05g48100)
-0.2 2.49 -0.97 - - - - 0.18 4.06 - -5.14 0.36 2.52 2.63 - 1.92 -1.88 -1.13 - 0.83 -4.37 - -1.48 - - -1.79 -0.21 - - - - - - - - - - - - -1.6 -1.56 - - -3.7 -1.18 0.99 - - -
LOC_Os06g15430.1 (LOC_Os06g15430)
-7.76 -4.33 0.9 -7.11 - -5.38 - - 4.05 1.6 1.48 -6.37 -1.08 2.64 - - -0.54 -6.65 2.4 -4.54 - - - -7.0 - - -4.93 - - -4.53 - -6.69 - - - - - - - - -8.59 - - - - - 2.02 2.16 1.76
LOC_Os06g16040.1 (LOC_Os06g16040)
-4.93 -2.01 -4.75 -2.2 -5.29 -5.81 -3.84 -3.08 2.56 -5.13 -0.93 2.46 0.46 3.4 - - -2.91 -3.16 - -4.27 -9.54 -4.61 -6.2 0.57 - - - - - - - -7.39 - - -5.14 -5.5 - -5.71 - -7.08 -4.58 -7.41 - -8.77 - - 1.11 2.88 3.69
LOC_Os06g20070.1 (LOC_Os06g20070)
-5.43 -2.38 -0.13 -4.87 -7.48 -4.8 -4.25 -4.24 1.2 -2.98 0.41 0.48 1.62 3.43 0.86 0.88 -0.61 -3.91 - -0.11 -1.55 -4.57 -2.82 -4.95 - - -4.05 -3.13 -3.92 - -5.15 -2.45 -3.17 - -4.54 -2.9 -2.59 -2.22 -2.27 -4.31 -2.86 -2.51 -2.24 1.83 2.94 3.26 - - -4.26
LOC_Os06g34380.1 (LOC_Os06g34380)
-4.06 -0.56 -6.04 -3.38 -3.99 - -3.36 -1.45 3.29 2.13 1.6 -2.54 - 2.84 - 4.39 -5.17 -2.26 - -3.53 -5.35 -5.51 -3.33 -1.93 - -3.13 -2.95 - - - - -0.4 - - - - - -2.21 - - -4.57 - -3.78 - - - - - -
LOC_Os07g04370.1 (LOC_Os07g04370)
2.06 1.88 -1.36 0.49 -1.0 3.51 1.72 1.86 3.13 -2.35 -2.17 -4.95 -5.88 2.99 - -2.3 1.61 -3.59 - -12.03 -8.49 - - - - -5.4 - - - - - -5.95 - - - - - - - - - - - -6.14 - - - -5.52 -
LOC_Os07g05840.1 (LOC_Os07g05840)
-3.51 -3.24 -0.12 -7.57 - -7.02 -4.08 -2.22 3.03 0.64 2.41 -6.18 -0.73 4.35 -3.25 1.7 0.8 -3.3 -3.38 -2.54 -7.68 -3.54 -7.63 -5.49 -5.04 -0.65 -2.46 - - -5.98 - -7.34 -6.18 -5.7 - -4.65 - - - -7.4 -3.51 -6.39 -5.44 -1.45 0.56 1.61 - -5.06 -
LOC_Os07g12820.1 (LOC_Os07g12820)
-3.94 0.21 - -2.1 -2.69 2.87 - - 4.52 0.27 0.48 - - -1.46 - - - - - -7.02 -0.82 - 1.18 -0.97 - 0.7 0.77 - - - - -0.41 0.97 - - - 1.04 0.44 - -1.51 -1.1 -1.46 -2.48 - - - - - -
LOC_Os07g30630.1 (LOC_Os07g30630)
0.05 3.55 -1.69 - - - - - 3.76 - 0.33 -0.4 - 1.24 1.76 0.74 - -1.76 - -1.07 - -3.82 -4.03 -3.07 0.78 - - - - - - 0.68 - - -0.33 -0.43 - - - 0.4 -0.26 -1.08 -0.85 -0.51 - - - 0.21 1.01
LOC_Os07g38780.1 (LOC_Os07g38780)
- 0.45 - 0.8 - -1.39 -2.18 -1.57 4.39 1.86 1.72 -0.13 -1.69 -0.19 - 2.85 - - - -2.97 -2.49 -1.84 -1.16 0.07 0.5 - -0.94 - - -0.54 - 0.27 - - -0.7 - - - - -2.84 -2.25 -2.11 -3.42 -5.07 - -1.06 - - -
LOC_Os07g41970.1 (LOC_Os07g41970)
-3.14 -0.05 -4.8 -4.76 -1.39 - -5.96 -3.96 3.6 0.96 0.8 1.12 - 2.7 0.01 0.4 -0.45 -5.54 0.11 -1.55 - -5.41 -5.56 -5.4 - -2.84 - - - - - - - - - - -2.63 - - -4.57 - -4.39 -3.74 0.73 3.75 1.03 -2.2 -2.13 -1.81
LOC_Os09g12860.1 (LOC_Os09g12860)
-6.36 0.63 -6.02 -4.42 -5.61 0.96 - -5.22 4.28 - -3.77 -4.45 - 4.56 - - -6.25 -6.51 - - -4.5 -6.79 -6.9 -4.39 - - -3.23 - - - - -1.78 -1.96 - - - -3.09 -1.65 -1.48 -2.44 -4.46 -2.02 -2.67 -6.91 -3.43 - - - -
LOC_Os09g25660.1 (LOC_Os09g25660)
-3.34 0.82 - -2.68 - 0.43 -3.72 - 4.16 -2.75 0.25 -3.65 - 4.6 - - - -4.49 - - -5.46 - -4.96 -1.92 - - - -1.5 - - - -0.25 - - - - - - - -4.92 - - - -2.61 - -1.79 - - -
LOC_Os09g27135.1 (LOC_Os09g27135)
-1.2 -0.92 -1.96 1.39 0.49 -1.12 -0.4 -0.09 2.77 -1.57 -1.03 0.43 -0.08 1.97 2.37 3.02 -0.01 -0.15 - 1.25 -5.91 -5.83 -5.47 1.21 -0.05 0.4 -0.25 - - - - -5.06 - - - - - -3.13 - -6.15 -4.37 -4.57 -4.65 0.27 -0.58 -0.62 0.16 -1.06 -1.82
LOC_Os09g33540.1 (LOC_Os09g33540)
- 2.13 0.92 - - 2.25 - - 4.14 - -1.12 - - 3.77 - - - - - - - - - - - - 2.64 - - - - - - - - - - - - - - - - - - - - - -
LOC_Os09g36400.1 (LOC_Os09g36400)
-0.48 3.3 -1.55 -1.23 -2.15 0.66 -4.57 -0.57 2.96 -2.61 -0.18 -1.88 -0.35 4.34 - - -0.25 -3.29 - -4.13 - -4.71 - -2.62 -0.17 - - - - -1.13 - -1.48 - - - -1.38 - - - - -4.56 - - -2.54 -1.61 0.21 - - -
LOC_Os10g29900.1 (LOC_Os10g29900)
-1.0 -0.32 0.83 - - - -3.18 -2.3 3.56 2.93 2.69 -4.69 - - - - - -3.95 4.01 - -4.07 -5.28 -2.26 -4.21 - - - - - -0.71 -0.14 -0.25 - - - - - - - - - - - - -1.82 -1.31 -2.83 - -
LOC_Os10g31120.1 (LOC_Os10g31120)
-1.3 1.19 -3.98 -1.62 -0.71 3.68 -3.29 -1.05 3.48 -4.53 0.08 -0.4 -1.4 0.53 - 0.07 - -1.74 - -1.34 - -2.51 - -1.41 2.97 -1.16 - - - - - -0.23 - - -0.74 - - - - -4.54 -3.11 -3.63 - -0.9 -1.71 - 0.6 0.42 0.12
LOC_Os11g08536.1 (LOC_Os11g08536)
- -0.14 -2.54 -3.05 - 1.3 -4.92 - 4.08 -3.16 1.65 2.63 0.89 3.81 - - - -0.34 - -4.27 -5.76 -2.56 - -3.66 - - - - - - - -3.62 - - - - - - - - - - - -3.57 -1.15 0.46 - - -
LOC_Os11g27640.1 (LOC_Os11g27640)
0.79 1.82 -3.19 -0.06 -2.14 - -1.09 -1.5 3.48 -0.6 -2.39 1.8 - -1.25 - 2.27 -3.28 -2.37 - 1.43 -3.93 -1.16 -3.56 -2.73 - 1.56 3.17 - - - - - 0.37 - - - 0.04 - - - -2.15 - -2.65 -1.95 -0.3 0.51 - - -
LOC_Os11g31510.1 (LOC_Os11g31510)
-3.43 -0.43 -7.37 -1.95 - - -4.48 -2.18 4.87 0.24 0.47 0.6 - - -1.93 3.25 - -4.24 0.8 -2.05 - -2.78 -5.12 -2.98 - 0.29 -0.13 - - - - - - - - - - -3.53 - - -5.8 - -5.1 - - - - - -
LOC_Os11g41770.1 (LOC_Os11g41770)
-5.67 -2.28 -1.93 -4.8 - 1.1 -3.1 -1.96 2.38 2.02 2.13 -7.29 -2.81 4.79 - 0.24 -0.09 -3.57 - -3.17 - -4.91 - -7.08 - -2.16 -1.51 - - - - -2.94 - - - - - - - -9.23 -3.77 -4.9 -4.05 -2.98 -1.4 -0.54 - - -
LOC_Os11g43550.1 (LOC_Os11g43550)
-4.72 2.14 - 0.55 -0.21 - 0.2 0.79 2.74 - -1.85 -2.39 1.95 3.72 - - 0.22 0.68 - -1.62 -0.84 -1.09 -0.47 -1.04 1.42 - - -2.12 -0.82 -0.3 0.69 -3.01 -2.31 -1.94 - -0.37 - -1.83 -1.83 -5.17 - -5.1 -5.1 -3.68 -0.03 -1.09 -1.82 - -2.75
LOC_Os11g46110.1 (LOC_Os11g46110)
1.62 2.69 0.95 - - 0.8 -3.33 -3.33 3.64 - 0.46 1.23 - - - - - -0.17 - 0.14 -2.21 -4.08 - -3.86 - 0.75 1.71 - - - - -2.03 - - - - - - - -2.51 -2.49 -1.74 -2.76 -1.27 0.84 0.61 - - 2.89
LOC_Os11g46120.1 (LOC_Os11g46120)
- 2.14 - - - - - - 4.57 - 1.05 - - - - - - - - - -1.96 - - -1.52 - - - - - - - - - - - - - - - -1.69 - - - - - - - 1.37 3.92
LOC_Os12g06230.1 (LOC_Os12g06230)
-3.21 0.65 -5.61 -2.36 -1.43 2.0 -0.96 -1.2 3.88 -3.78 -0.79 -1.95 1.79 1.48 -3.57 - 0.19 -4.83 0.11 -3.12 -3.2 -2.6 -3.67 -3.87 - -0.98 -0.2 -4.74 -3.16 -4.75 -4.66 -0.94 -2.69 -1.67 -2.46 -2.74 - -2.84 -4.21 -5.56 -5.55 -5.3 -5.04 -8.64 -1.77 -3.29 3.04 2.34 -3.13
LOC_Os12g40720.1 (LOC_Os12g40720)
-0.85 3.15 -0.96 -2.56 -2.79 -0.87 -0.37 -1.85 3.58 -3.99 0.2 - 1.37 4.09 - - -0.58 -0.45 - -4.48 - - - -2.75 - - - - - - - -1.44 - - - - - - - - - - - 0.43 0.11 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.