Heatmap: Cluster_155 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g09246.1 (LOC_Os01g09246)
0.79 0.07 -2.1 -7.25 -8.38 -5.92 0.64 0.94 0.25 0.66 -0.21 1.61 0.86 0.81 -0.02 -0.03 1.02 -0.25 0.66 0.93 -1.34 -1.48 -1.31 -1.5 0.49 0.59 0.61 -1.2 -1.49 -1.57 -1.77 -1.25 -1.22 -0.43 -1.57 -1.42 -1.46 -1.5 -1.52 -1.69 -1.32 -1.32 -1.0 1.03 1.53 1.16 0.14 0.62 0.82
1.02 0.61 -1.41 -4.3 -6.1 -3.18 -0.21 -0.22 0.01 1.93 1.79 0.87 1.15 1.33 -0.03 -0.47 0.6 0.87 -0.68 0.64 -0.58 -0.02 -0.65 -0.19 -1.54 0.57 0.54 -0.48 -0.71 -0.18 -0.98 -0.82 -0.73 -1.21 -0.26 -0.34 -0.26 0.08 -0.02 -2.52 -1.5 -1.65 -1.02 -0.33 -0.16 -0.25 -0.54 -0.95 -0.42
LOC_Os01g26370.1 (LOC_Os01g26370)
1.65 2.01 1.07 -2.78 - - 1.59 0.92 -1.11 -0.41 0.17 0.21 1.51 1.13 - - 2.98 0.1 - 1.27 -1.56 -8.38 -1.43 -7.16 -1.32 -0.92 -1.5 -2.05 -3.56 -3.53 -2.6 -1.32 -1.23 -4.1 - -1.06 -1.31 -0.7 -2.2 -1.61 -0.62 -1.72 -0.67 1.52 - - 0.1 0.58 1.18
LOC_Os01g27590.1 (LOC_Os01g27590)
1.53 1.21 0.78 -0.06 0.44 3.03 1.58 1.67 -0.3 -0.47 0.3 - 1.71 1.4 - - 2.19 -0.15 - 0.88 -8.06 - -9.19 -6.65 0.25 -6.03 - - - - - -5.66 - - - -5.77 -4.83 - - - -6.43 -6.79 -5.45 2.08 - -4.8 -0.54 -0.02 1.08
LOC_Os01g51210.1 (LOC_Os01g51210)
0.59 0.78 1.29 -2.65 -2.66 -4.36 0.54 0.58 1.01 -1.39 0.11 2.33 0.22 -0.01 0.98 0.29 -1.1 0.78 0.8 -0.33 -1.15 -0.88 -0.96 -0.82 -1.01 -0.14 1.26 -1.15 -1.17 -0.37 -0.47 1.03 -0.97 -1.77 -2.06 -1.09 -1.69 -1.37 -1.7 -3.1 -2.59 -2.39 -2.28 0.08 1.66 0.56 -1.08 -0.55 0.15
LOC_Os01g60190.2 (LOC_Os01g60190)
-0.02 -0.16 -0.79 -1.97 -2.56 -2.0 1.72 1.74 -0.19 0.01 0.79 0.91 0.08 0.43 -1.25 -1.5 -0.99 0.08 -0.36 0.91 -1.29 -1.78 -1.31 -1.92 0.72 -1.0 1.08 -1.87 -1.79 -1.33 -1.74 -1.12 -1.51 -1.87 -1.59 -0.87 -1.52 -1.16 -0.78 -1.65 -1.08 -1.55 -1.22 1.34 1.0 0.46 0.94 2.14 1.2
LOC_Os02g04390.1 (LOC_Os02g04390)
-1.06 -0.8 -0.93 1.92 -0.01 5.01 -0.05 0.55 -2.01 -4.12 -3.54 -4.27 -4.0 - -0.55 0.09 -2.33 -1.39 - -0.72 -4.41 -3.11 -4.73 -5.81 - 0.34 0.03 - - - - - - - - - -2.55 - - -6.23 -4.05 - -4.09 -1.89 -1.08 -3.31 -0.8 -1.63 -
LOC_Os02g05420.1 (LOC_Os02g05420)
0.2 0.75 1.29 -2.48 -3.18 2.98 0.56 0.1 0.38 -0.09 0.47 -3.02 1.49 0.97 -2.89 -2.53 1.99 0.39 0.54 0.43 -1.5 -6.8 -1.82 -6.07 -0.98 -1.75 -0.11 -2.18 -1.89 -2.59 -2.02 -1.14 -2.01 -3.5 -2.17 -1.38 -1.57 -1.37 -1.18 -1.67 -0.96 -1.58 -0.79 0.77 -2.94 -2.18 0.77 0.64 1.66
LOC_Os02g06170.2 (LOC_Os02g06170)
1.74 1.8 -1.42 1.3 -0.96 2.94 0.54 0.56 0.39 0.82 0.87 -4.07 0.63 0.89 -0.81 -0.73 0.59 0.46 -1.29 -0.43 -3.98 -4.15 -3.91 -8.89 -1.06 0.4 -0.04 -2.82 -3.65 -2.0 -3.03 -2.3 -3.39 -4.98 -4.47 -3.64 -4.21 -3.49 -4.48 -4.71 -3.83 -4.0 -3.92 0.2 -0.05 -0.47 0.65 1.94 0.99
LOC_Os02g10710.1 (LOC_Os02g10710)
-0.04 0.9 -0.27 -1.33 -2.93 -4.96 -1.96 -2.45 -1.67 -0.63 0.81 -3.23 -0.19 -0.03 -0.16 -0.65 -0.08 0.18 - 0.21 -5.93 -5.27 -4.27 -4.4 4.2 0.17 -0.33 - - -2.88 - -6.54 - -3.1 -4.55 -4.65 - - - -6.16 -5.15 -5.33 -5.89 0.43 -0.03 0.56 2.93 1.14 -1.49
LOC_Os02g24820.1 (LOC_Os02g24820)
-1.92 4.12 1.06 - - - - -0.2 - 4.31 2.23 - - - - - - 1.26 - -1.97 - - - - - - - - - - - - - - - - - - - - - - - 0.34 - - - - -
LOC_Os03g01420.1 (LOC_Os03g01420)
-0.43 1.34 1.0 -1.11 -1.01 0.76 1.58 1.46 0.16 0.22 0.43 0.96 1.2 0.99 - - 2.01 0.0 -5.06 0.16 -1.0 -8.08 -1.09 -7.24 -2.57 -1.49 -0.67 -0.93 -1.49 -1.34 -1.52 -0.57 -1.21 -1.33 -1.02 -0.68 -1.26 -0.73 -0.92 -1.29 -0.79 -1.0 -0.45 0.86 -3.24 -2.3 0.51 1.0 1.86
LOC_Os03g01490.1 (LOC_Os03g01490)
-0.69 1.44 0.66 -0.19 -0.64 0.54 1.55 1.42 -0.89 0.25 0.44 1.23 1.23 0.97 - - 1.7 0.22 -4.25 0.44 -1.43 -8.09 -1.61 -7.62 -2.9 -0.84 -0.06 -1.72 -1.8 -1.36 -1.73 -1.13 -1.55 -1.86 -1.68 -1.42 -1.57 -1.36 -0.96 -1.66 -1.09 -1.29 -0.72 1.19 -8.44 -4.1 0.8 1.39 2.27
LOC_Os03g10170.1 (LOC_Os03g10170)
1.1 2.95 0.75 -1.67 -2.53 2.56 -0.57 -0.58 -4.82 -4.61 -0.46 - -0.74 -0.96 - - 2.52 -1.13 - -2.67 -4.2 -6.38 -5.84 -6.92 0.22 -3.32 - - -3.99 -4.32 - -3.27 -4.51 - - - -3.65 -3.79 - -4.62 -4.1 -3.41 -4.99 -1.45 -2.06 -2.63 1.51 1.72 3.65
LOC_Os03g48540.1 (LOC_Os03g48540)
-1.67 1.1 -2.74 -9.75 - -9.13 -1.06 -1.43 -1.54 -2.92 0.34 1.63 -0.13 0.01 -2.68 -2.56 -0.27 -1.66 1.27 -1.75 -4.1 -3.81 -3.98 -4.42 -2.94 -3.85 -2.39 -4.27 -3.87 -4.23 -4.91 -3.67 -4.33 -4.82 -4.47 -4.08 -4.85 -3.88 -4.03 -3.46 -3.62 -3.6 -3.67 0.74 2.34 1.64 3.96 2.4 1.26
LOC_Os03g61840.1 (LOC_Os03g61840)
0.58 -0.97 2.64 0.68 0.05 3.52 -1.06 -1.34 1.06 -6.07 -3.01 -2.79 -5.92 -4.03 -4.07 -3.03 -1.01 -4.81 - -1.5 -0.84 -1.06 -1.1 -0.75 3.06 -5.6 -3.34 -0.57 -1.04 -0.85 -0.6 -0.12 -1.53 -1.94 -0.61 0.63 -0.53 -1.21 -0.56 -0.9 -0.83 -0.75 -0.69 -6.47 -3.42 -3.44 -3.03 -1.99 -0.11
LOC_Os04g22270.1 (LOC_Os04g22270)
0.36 1.45 -1.18 1.92 1.03 2.58 0.58 0.82 -3.85 -0.13 0.43 -4.05 1.36 1.42 -3.96 -2.46 1.59 0.86 - -0.28 -3.3 -7.49 -4.1 -9.52 -1.54 -1.55 -2.12 -4.03 -3.25 -3.14 -4.59 -3.28 -4.86 -3.97 -3.69 -4.19 -3.02 -3.77 -3.74 -4.96 -4.15 -4.56 -3.73 1.06 -0.42 -0.25 1.08 2.38 1.44
LOC_Os04g40100.1 (LOC_Os04g40100)
-1.13 0.13 -5.83 -6.4 -4.92 - 0.56 0.93 -2.14 -2.85 -2.26 -2.66 -0.16 1.04 2.24 2.43 -3.87 1.43 -2.64 2.14 -2.01 -1.53 -1.83 -1.72 0.88 2.75 1.96 -2.65 -2.51 -1.86 -1.89 -2.19 -2.34 -4.89 -2.13 -1.7 -2.14 -1.01 -1.27 -1.46 -0.83 -0.86 -0.59 0.59 0.17 0.42 -2.73 -6.87 -9.05
LOC_Os04g44260.1 (LOC_Os04g44260)
1.74 2.73 - -0.18 - - 0.3 1.17 -0.74 1.13 2.37 - -0.85 0.4 2.76 - 1.52 -1.7 - 0.84 -1.29 -2.3 -2.18 -3.57 1.25 0.77 - - - - - - 0.31 - - - -0.02 - - -1.06 -1.13 -0.23 -1.08 -0.07 1.39 - - - -
LOC_Os05g35000.1 (LOC_Os05g35000)
-2.12 1.95 1.33 3.83 4.13 - 1.01 0.13 -1.03 - -0.41 - - - 0.52 - -3.05 -1.74 - -2.96 - -4.13 -0.96 -2.67 0.64 - -0.83 - - - - - - - - - - -0.12 - - - - - - -0.94 - - - -
LOC_Os05g46140.1 (LOC_Os05g46140)
1.85 1.11 0.88 -2.37 -3.12 -4.06 0.54 -0.08 0.97 -0.48 -0.26 0.59 0.86 0.48 1.11 0.82 2.0 0.88 1.43 0.55 -1.93 -1.59 -2.39 -1.92 -0.3 0.74 1.02 -1.38 -1.44 -2.06 -3.3 -1.65 -2.07 -2.35 -2.39 -1.74 -1.14 -1.27 -1.48 -2.16 -1.1 -1.82 -1.31 0.22 -0.66 -0.41 -0.81 0.03 0.88
LOC_Os05g46920.1 (LOC_Os05g46920)
0.44 1.62 -0.33 0.86 0.34 2.53 1.43 1.53 -3.99 -0.15 0.03 -6.4 1.36 1.35 - - 2.14 0.65 - 0.07 -9.01 -10.43 -2.31 -8.81 -0.45 - -6.55 - - - - - - - - - - - - - -9.84 - - 1.18 -0.06 -0.05 1.05 2.26 1.69
LOC_Os06g19460.1 (LOC_Os06g19460)
0.06 1.53 2.25 - - 1.56 1.53 1.09 0.25 -0.99 0.7 -0.89 1.47 0.44 - - 1.94 -0.03 - -0.62 -0.38 -0.36 -2.25 -5.23 2.53 - - -1.24 0.91 -0.81 -2.74 -0.8 -1.32 -1.95 -2.39 - -0.45 -1.11 -2.65 -6.34 -3.29 -1.33 -1.48 0.79 - - -1.58 -0.9 1.04
-0.28 0.51 1.03 -0.13 0.64 2.77 0.66 0.7 -0.54 -1.75 -1.0 -0.71 1.18 0.83 - - 1.82 -0.2 - 0.15 -0.29 -3.53 -2.6 -5.5 -2.07 - - -0.0 -0.62 -0.33 -0.94 0.39 0.1 -1.28 -0.18 0.08 -0.36 0.01 0.0 -0.48 0.07 -0.12 0.46 0.24 -0.17 -0.76 -0.42 -0.51 -0.85
LOC_Os06g37530.1 (LOC_Os06g37530)
0.74 2.85 0.74 1.2 0.48 1.75 -1.76 -3.08 - -2.0 -1.11 - 0.02 -0.29 - - 0.93 -0.87 3.99 -1.77 -2.54 -1.24 -1.22 -2.34 - - -1.02 - - 0.38 - -1.78 -0.62 - - - - - - -1.09 -0.75 -3.12 -0.34 0.19 - - 1.24 -1.35 -
LOC_Os07g07280.1 (LOC_Os07g07280)
-1.25 -0.48 0.52 -0.13 -0.18 3.46 -0.04 -0.4 -0.63 0.71 -0.05 0.15 0.56 0.76 -1.32 -0.9 0.65 0.07 0.92 0.2 -1.9 -2.02 -1.64 -3.21 -1.37 0.64 0.72 -2.04 -1.37 -2.51 -2.65 -1.2 -2.9 -2.01 -1.79 -1.83 -1.7 -2.01 -2.83 -2.16 -1.72 -2.76 -1.9 -0.11 -0.5 -0.77 0.17 0.6 2.15
LOC_Os07g10800.1 (LOC_Os07g10800)
0.47 1.22 -1.7 2.18 -2.47 2.21 0.92 1.23 -0.53 1.36 1.0 -4.38 1.32 1.3 -0.95 0.44 0.44 -0.1 1.57 0.3 -2.25 -5.07 -2.15 -5.04 -1.9 -0.44 -0.52 -2.09 -2.53 -2.01 -3.03 -0.92 -2.41 -3.68 -1.43 -1.88 -2.33 -2.19 -3.12 -2.49 -2.24 -2.02 -1.64 0.98 -1.04 -1.74 0.31 0.92 -0.04
LOC_Os07g31260.1 (LOC_Os07g31260)
0.91 -0.05 -1.62 -0.96 -0.13 0.0 0.56 0.78 -0.13 0.22 -0.11 0.95 0.96 0.69 0.11 -0.12 0.41 0.25 1.21 0.69 -0.99 -0.87 -0.83 -0.85 1.5 0.49 1.01 -1.02 -1.04 -1.06 -1.31 -0.86 -1.36 -1.79 -1.53 -0.99 -0.99 -1.03 -1.23 -1.66 -1.27 -1.28 -1.21 0.69 0.6 0.31 0.77 0.18 -0.49
LOC_Os08g14050.1 (LOC_Os08g14050)
0.78 1.63 0.14 0.1 -1.88 2.34 0.72 0.85 -0.97 0.17 -0.27 0.59 0.92 0.96 0.29 0.16 1.94 -0.01 -0.21 1.04 -7.69 -3.14 -2.64 -2.11 0.82 1.65 1.27 - - - - - - - - - - - - -8.89 -4.86 -7.06 -7.57 1.17 0.48 -0.26 -0.23 -0.37 0.43
LOC_Os08g42189.2 (LOC_Os08g42189)
0.33 1.33 0.74 -1.77 -0.18 2.31 1.3 1.21 -3.48 0.27 -0.01 -8.09 2.11 1.68 -6.03 -5.84 2.08 0.78 - 0.38 -2.12 -6.72 -2.2 -7.46 -0.34 -7.19 -5.34 -1.66 -4.08 -1.82 -2.45 -1.78 -1.41 -2.7 -3.59 -2.5 -1.86 -2.24 -1.77 -3.08 -3.14 -2.38 -2.09 1.27 - -3.66 1.62 1.48 1.36
LOC_Os08g42268.1 (LOC_Os08g42268)
0.33 1.33 0.74 -1.77 -0.18 2.31 1.3 1.21 -3.48 0.27 -0.01 -8.09 2.11 1.68 -6.03 -5.84 2.08 0.78 - 0.38 -2.12 -6.72 -2.2 -7.46 -0.34 -7.19 -5.34 -1.66 -4.08 -1.82 -2.45 -1.78 -1.41 -2.7 -3.59 -2.5 -1.86 -2.24 -1.77 -3.08 -3.14 -2.38 -2.09 1.27 - -3.66 1.62 1.48 1.36
LOC_Os08g42310.1 (LOC_Os08g42310)
-0.33 0.49 0.09 -1.2 -1.94 2.76 0.39 0.09 -3.2 0.84 0.36 -0.16 1.58 0.77 - - 1.22 0.28 - 0.28 -0.12 -6.79 -0.67 -6.18 0.63 - - -0.38 -0.18 -0.05 -0.71 -0.17 -0.29 -0.83 -0.3 -0.01 -0.14 0.29 0.02 -0.71 -0.29 0.13 0.6 1.0 - -5.33 -0.28 -0.14 0.01
LOC_Os10g33104.1 (LOC_Os10g33104)
2.04 0.87 -1.21 -0.65 -2.24 1.07 1.5 1.61 0.7 -0.34 0.21 1.18 1.17 0.55 0.97 0.83 0.38 0.15 -1.64 1.56 -3.9 -1.67 -4.14 -3.83 -3.3 1.43 1.05 -1.79 -1.81 -3.5 -3.05 -2.65 -3.34 -2.97 -2.74 -2.51 -2.52 -4.72 -3.97 -3.16 -1.41 -1.77 -1.55 1.08 1.58 0.36 -3.07 -4.04 -
LOC_Os11g27530.1 (LOC_Os11g27530)
1.27 0.62 1.57 -0.65 -1.99 2.88 0.39 -0.26 0.26 0.94 1.54 -0.16 0.04 -0.15 -0.14 -0.66 1.16 -0.07 1.25 0.07 -2.66 -3.38 -2.85 -2.2 -0.77 0.33 0.81 -1.91 -2.68 -3.22 -3.15 -1.82 -2.34 -3.94 -2.58 -2.6 -2.12 -2.43 -2.32 -3.08 -2.43 -2.96 -2.24 -0.26 -0.31 -0.83 -0.05 0.32 1.7
LOC_Os11g33090.1 (LOC_Os11g33090)
-1.1 0.21 0.18 -2.98 -4.0 -2.12 0.55 0.59 -0.73 1.63 1.44 1.43 -0.47 -0.44 0.28 0.66 0.2 -0.31 2.55 1.07 -2.46 -3.03 -1.33 -1.38 -1.97 0.3 0.01 -2.63 -3.73 -1.65 -2.65 -0.94 -2.19 -3.73 -1.78 -2.02 -2.02 -2.06 -2.62 -2.88 -2.41 -2.28 -1.96 1.58 1.42 1.12 1.2 0.17 0.31
0.61 -0.02 -0.15 -1.06 -1.13 2.66 1.66 1.95 -2.24 0.25 0.47 0.26 0.33 1.43 -1.9 -1.85 2.19 1.2 -0.88 1.11 -4.23 -1.1 -5.97 -0.26 1.43 -2.19 -1.56 -4.15 -3.82 -3.41 -3.13 -3.02 -4.46 -3.37 -4.32 -4.13 -4.05 -4.15 -4.22 -5.5 -4.32 -5.12 -4.74 2.34 -0.19 -0.52 -0.97 -1.55 -2.88
LOC_Os11g34790.1 (LOC_Os11g34790)
0.14 0.37 0.55 -0.3 -1.25 2.6 1.76 1.69 -2.75 0.37 1.02 -5.02 1.45 1.59 - - 2.27 0.4 - 0.11 -14.19 -6.41 -13.87 -7.45 -0.47 -9.16 -7.6 - - - - -10.76 - - - - - - - -12.73 -10.76 - -13.21 1.45 - -3.74 1.53 1.87 2.21
LOC_Os12g07940.1 (LOC_Os12g07940)
0.57 1.42 0.4 -0.76 -3.06 1.83 1.64 1.67 -2.35 0.92 1.08 -1.25 1.55 1.42 -6.91 -7.9 1.89 -0.19 -5.23 0.32 -0.73 -6.21 -3.07 -6.19 -0.32 -4.48 -3.76 -0.76 -0.92 -1.15 -1.35 -0.59 -1.03 -1.68 -1.32 -0.82 -0.92 -0.9 -1.06 -1.24 -0.89 -0.84 -0.54 1.05 -6.59 -7.13 0.81 0.62 0.74
LOC_Os12g26480.2 (LOC_Os12g26480)
-0.03 1.05 0.45 -0.1 -0.51 3.01 1.14 1.17 -0.29 -0.42 0.03 0.39 0.81 0.56 1.15 0.9 1.65 0.55 0.76 0.94 -8.24 -4.17 -1.73 -2.31 0.86 -0.05 -0.01 - - - - - - - -5.66 - - - - -9.31 -4.6 - -8.74 1.61 -1.06 -1.4 -0.0 -0.97 0.22
LOC_Os12g35450.1 (LOC_Os12g35450)
1.1 1.81 0.52 1.86 -0.59 3.26 0.15 0.33 -2.59 -0.4 0.55 -7.48 1.22 1.11 -1.51 -1.24 1.26 0.72 1.01 0.55 -3.63 -4.06 -4.1 -6.41 -1.19 0.76 0.43 -4.28 -3.22 -4.29 -4.27 -3.78 -4.16 -5.18 -3.65 -4.08 -5.08 -5.0 -3.78 -3.91 -3.2 -3.75 -2.83 0.09 0.17 -0.88 0.02 0.28 -0.46
LOC_Os12g36770.2 (LOC_Os12g36770)
-0.9 -0.59 -2.7 -3.56 -5.29 0.92 0.25 0.08 -0.53 -1.45 -0.81 1.54 0.45 0.5 -0.71 -0.84 0.39 0.41 -0.89 1.64 -1.09 -1.21 -1.15 -1.24 1.85 0.02 0.99 -1.44 -1.6 -0.85 -1.88 -0.49 -1.73 -2.99 -1.5 -1.0 -1.49 -0.92 -1.3 -1.86 -1.09 -2.31 -1.87 1.37 1.56 1.45 1.18 -0.61 1.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.