Heatmap: Cluster_67 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g15950.1 (LOC_Os01g15950)
-0.03 0.02 3.05 3.1 1.6 1.66 1.29 0.62 1.61 -1.63 -0.08 0.06 -3.38 -2.86 1.91 -0.87 -3.05 -0.59 - -0.76 - - - -3.92 - -0.65 0.79 - - - - - - - - - - - - - -4.58 - - -1.3 0.82 0.51 -0.69 0.6 -0.85
LOC_Os01g52180.1 (LOC_Os01g52180)
-1.76 -1.43 1.92 3.58 3.36 -0.68 -0.03 0.02 -4.13 -7.67 -2.98 - -3.15 -3.03 -2.07 -3.06 -3.21 -3.26 - -3.37 -9.17 -6.83 -7.57 - -0.04 -3.2 -2.81 - - - - - - - - - - - - - -5.7 -5.87 -6.74 -3.28 0.16 -1.31 3.42 1.65 0.9
LOC_Os01g53130.2 (LOC_Os01g53130)
0.44 1.07 2.17 3.25 3.33 -0.99 1.21 1.47 0.56 -1.46 -1.05 -1.06 -0.51 -0.45 -2.73 -1.58 0.04 -0.34 -1.77 -1.31 -3.14 -3.33 -3.08 -3.49 -1.17 -0.4 -0.47 -2.72 -4.07 -2.17 -2.52 -2.09 -3.5 -4.8 -3.87 -3.89 -2.92 -2.62 -3.27 -4.27 -3.97 -3.47 -3.25 0.81 -1.02 -0.83 0.07 -1.18 -2.31
LOC_Os01g57620.1 (LOC_Os01g57620)
-1.61 1.06 2.35 4.59 2.19 -0.33 1.62 1.42 -1.21 -1.56 -0.31 - -2.92 -4.73 - -0.19 -0.27 -3.63 -0.5 -2.91 -6.81 -7.08 - - - -3.64 -2.52 - - - - - - - -3.28 - - - - -5.91 - - - -0.02 -3.56 -4.42 -2.82 -2.74 -3.16
LOC_Os02g02275.1 (LOC_Os02g02275)
-0.59 -0.78 3.37 3.36 1.75 -0.05 2.0 2.22 -1.38 -2.91 -0.23 -3.32 -2.52 -1.08 -1.91 -3.5 -0.07 -2.66 0.69 -4.42 -7.32 -7.91 -6.45 -6.35 -0.6 -4.92 -4.85 - - -4.5 -5.56 -5.93 - - - - - - - -9.32 -7.47 -7.18 -7.18 -2.56 -3.82 -3.89 1.39 2.11 -0.22
-4.34 -5.16 3.01 3.58 4.61 1.13 0.17 0.06 -8.82 -6.91 -5.42 -10.22 -6.43 -7.53 -6.16 -6.71 -10.64 -7.12 - -7.6 -10.99 -12.47 -10.49 -9.94 -8.68 -6.82 -9.04 - - - -9.79 -10.2 -9.57 - - -8.89 - - - -11.57 -11.99 -12.04 -10.3 -7.58 - -8.6 - - -
LOC_Os02g05120.1 (LOC_Os02g05120)
-1.9 -0.13 2.35 2.65 -0.04 3.1 1.16 1.7 1.09 0.18 0.7 -3.84 -3.36 -1.31 -0.37 0.88 1.47 -1.05 1.6 -0.83 -6.58 -8.16 -7.0 -7.59 -3.67 -0.85 -0.89 - - - - -7.87 - - - - - -6.18 - -6.93 -5.65 - -8.43 -3.54 0.33 -0.05 -1.11 0.52 0.11
LOC_Os02g05300.1 (LOC_Os02g05300)
2.24 1.14 2.13 0.65 -0.38 4.16 1.95 1.44 1.25 -2.18 -0.16 -1.32 -1.98 0.32 - - 0.55 -3.39 0.23 -3.79 - -6.52 - -4.26 0.57 - -2.77 - - - - -3.53 - - -2.54 - - - - -5.05 -4.03 - -5.04 -3.48 - - - -3.1 -1.43
LOC_Os03g10390.1 (LOC_Os03g10390)
0.39 1.12 1.83 3.43 2.36 -1.73 2.13 2.38 1.03 -1.7 -0.78 1.08 -3.33 -3.87 -0.96 -1.29 -0.13 -2.09 -3.48 -0.81 -3.21 -3.23 -2.79 -3.25 -1.7 -0.87 0.69 -4.12 -3.04 -2.69 -2.81 -2.28 -3.18 -4.43 -4.12 -3.22 -3.81 -3.23 -3.46 -4.52 -4.15 -4.43 -4.27 -0.88 1.1 0.11 -5.84 -5.25 -5.98
LOC_Os03g11640.1 (LOC_Os03g11640)
- -0.2 2.61 4.18 3.61 3.06 0.97 0.39 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os03g43350.1 (LOC_Os03g43350)
-0.94 -0.23 2.73 3.35 3.43 3.2 1.94 2.64 - -7.45 -3.49 - - -3.64 - - -3.36 -5.78 - -5.39 - -5.99 - -5.91 -2.71 - -4.15 - -4.04 - - -4.32 - - - - - - - -7.4 -6.53 - -6.32 -3.81 - - -3.46 - -
LOC_Os03g46690.1 (LOC_Os03g46690)
-4.8 -1.43 3.04 3.57 2.89 3.18 2.1 2.74 -6.91 -2.11 -0.87 -5.53 - -4.43 -4.86 - -8.79 -5.47 - -6.96 -9.79 -7.23 -6.59 -8.14 -4.79 -6.07 - - - - - -6.89 - - - - - - - - -8.55 -8.33 - -8.14 -6.18 -5.43 - -4.09 -6.37
LOC_Os03g51210.1 (LOC_Os03g51210)
-6.31 -2.79 2.36 4.37 3.9 0.6 1.35 1.73 -5.68 -4.09 -2.05 - -6.98 -3.36 - -4.96 -9.52 -8.73 - -9.38 -9.71 - -8.6 -6.93 - - - - - - - - - - - - - - - - - - - -7.28 -3.24 -4.68 -5.6 -6.77 -5.94
LOC_Os03g54190.1 (LOC_Os03g54190)
-3.43 -0.33 3.04 4.25 2.32 2.29 2.12 2.51 -2.63 - -4.41 -2.99 - -5.61 - - -3.36 -2.86 - -11.22 - -8.02 - - - -3.51 - - - - - -4.56 - - - - - - - -7.55 - -5.82 - -5.94 -2.98 -3.4 - - -
LOC_Os04g01170.1 (LOC_Os04g01170)
-2.07 -0.76 2.65 1.57 4.41 3.23 1.12 0.6 - -1.1 -1.56 -2.87 -1.59 - - -0.12 0.02 -2.51 - -3.38 - - - - - -1.47 -1.45 - - - - - - - - - - - - - - - - -2.29 - -2.32 - - -
LOC_Os04g08070.1 (LOC_Os04g08070)
-0.19 -0.39 2.54 4.47 2.36 -2.78 2.53 2.86 -5.62 -2.6 -1.78 - -4.69 - - - -4.17 -4.52 - -3.86 - - - - - - -4.89 - - - - - - - - - - - - - -8.7 - - -4.72 -2.8 -3.74 - - -
LOC_Os04g30980.1 (LOC_Os04g30980)
-3.28 -1.32 3.16 4.25 0.74 0.93 1.89 1.77 -0.27 -1.14 0.85 -1.82 -2.85 -3.35 -2.62 -2.61 -3.86 0.76 - -0.93 -3.3 -4.02 -3.55 -2.72 - -3.09 -0.5 - -3.21 - -2.34 -1.81 - - -1.64 - -2.76 - -2.1 -4.55 -3.54 -3.57 -3.16 -2.08 -1.89 - - -3.34 -2.59
LOC_Os04g54400.1 (LOC_Os04g54400)
-2.4 1.02 2.32 2.92 1.73 1.94 2.25 2.01 0.38 -3.71 -0.99 -3.04 -0.01 1.13 - -0.87 -0.35 1.02 0.09 -2.02 -3.28 -3.07 -3.16 -2.36 0.17 -3.63 -4.53 -1.93 -3.4 -3.36 -2.43 -3.67 -3.2 -3.94 - -4.35 -3.43 -4.57 -2.44 -4.79 -3.57 -3.51 -3.56 -2.36 -0.32 -0.28 1.41 -1.04 -3.15
LOC_Os04g55200.1 (LOC_Os04g55200)
-4.03 -1.96 2.94 3.27 0.96 0.32 1.52 2.14 1.64 -1.39 -1.6 1.3 -0.91 -1.38 -1.09 -0.96 -2.4 -0.27 -0.11 0.08 -2.79 -3.17 -3.59 -3.09 -3.26 -0.47 1.68 -3.41 -3.36 -2.19 -2.73 -1.5 -2.91 -4.37 -4.42 -3.42 -2.73 -3.51 -4.0 -5.76 -5.58 -5.17 -4.47 -1.18 -4.35 -2.81 -0.44 0.22 0.06
LOC_Os06g05610.1 (LOC_Os06g05610)
1.17 0.85 2.96 3.36 0.37 0.32 2.11 2.53 -1.03 1.72 1.6 -1.51 -1.85 -1.97 -0.68 -2.27 -0.41 -2.68 - -2.21 -3.35 -4.24 -2.78 -3.74 -2.13 -1.34 -2.55 -2.41 -2.84 - - -2.93 -2.17 -2.89 - -3.44 -1.44 -3.64 -1.73 -4.82 -3.91 -3.06 -2.63 -3.02 -0.05 -2.99 - -2.75 -
LOC_Os06g05620.1 (LOC_Os06g05620)
1.25 0.45 2.85 2.78 2.76 3.71 1.3 1.63 -0.31 -0.4 -0.71 -2.39 -2.43 -0.1 - - 0.3 -3.52 - -10.85 -7.43 -6.5 -6.45 -5.27 - -3.05 - - - - - -3.45 - - - - -3.95 - - -7.74 -7.68 - - -7.77 - - -3.06 -1.44 -2.45
LOC_Os06g35090.1 (LOC_Os06g35090)
-0.2 1.52 1.88 3.83 3.03 0.5 1.68 2.28 -0.13 0.32 0.46 -1.4 - - -0.31 -0.26 -2.85 -0.4 - -1.67 -3.47 -2.93 - -3.99 - - -0.59 - -0.86 - - -0.76 - - - - - - - -4.16 - - -2.99 -4.34 -0.77 - - - -
-2.86 -1.52 2.52 3.48 1.13 3.83 2.04 2.81 -3.88 0.21 0.41 -5.07 -5.81 -4.75 - -7.52 -5.52 -5.18 -0.45 -7.21 -8.79 -9.13 -9.09 -9.05 - -8.75 - -8.43 -8.71 -8.41 - -7.57 - -8.14 -8.58 -8.64 - -7.89 -7.44 -9.79 -10.02 -8.67 -8.91 -4.47 -1.61 -3.96 -4.34 -4.83 -5.24
LOC_Os07g01740.1 (LOC_Os07g01740)
-4.36 -1.33 2.48 2.83 2.12 2.49 0.42 1.11 -5.04 -2.49 -1.09 0.4 -0.2 0.17 -1.29 -2.28 -3.05 -0.71 -1.59 -0.4 -0.52 -5.94 0.15 -5.61 -3.25 -0.07 -2.04 -0.0 -0.35 -0.32 -1.94 -0.12 -0.39 -0.38 -0.74 -0.37 -0.18 -0.37 -0.76 -1.09 -0.85 -2.09 -1.47 -2.76 -0.47 -1.84 -1.22 -0.9 -2.38
LOC_Os07g02420.1 (LOC_Os07g02420)
-5.03 2.48 3.58 3.2 2.87 1.15 2.44 2.29 -1.93 - - - - -1.13 - - - - - - - - - - - - - - - - - -2.03 - - - - - 0.4 - - - - - - - - - - -
LOC_Os07g31830.1 (LOC_Os07g31830)
-6.04 -4.5 2.18 3.95 4.33 0.83 1.31 1.24 -8.63 -6.65 -6.03 -3.48 -4.72 -5.35 -1.1 -1.29 -11.71 -5.47 - -2.42 -5.68 -5.33 -5.35 -6.17 - -3.37 -2.82 -6.78 -4.56 -6.03 -7.37 -5.0 -5.3 -6.04 -6.3 -5.44 - -5.61 -6.41 -5.14 -4.32 -4.29 -4.31 -2.8 -3.64 -6.45 - - -
LOC_Os08g04000.1 (LOC_Os08g04000)
-1.88 -1.69 1.06 3.93 3.1 3.48 1.24 1.18 -1.83 -1.45 0.26 -1.32 -3.68 - -1.51 -0.52 -1.49 -2.14 - -2.89 -4.18 -2.88 -3.07 -4.84 - - -1.82 - -3.73 -3.43 - -3.01 -3.43 - -3.6 -3.66 -3.56 - -2.15 -3.61 -3.94 -3.15 -2.47 -3.55 -2.14 -3.9 -2.88 -3.16 -
LOC_Os08g28480.1 (LOC_Os08g28480)
0.65 1.24 1.66 1.03 0.34 3.8 0.03 0.07 1.1 -2.76 -1.35 0.37 -4.5 -2.66 -2.43 -1.42 2.61 -1.55 2.84 -1.53 -5.74 - -6.19 -4.66 - -2.22 -1.78 - - - - -4.51 - - - -3.62 -3.68 - -3.07 -6.99 - - -6.52 -5.5 -1.23 -1.35 -1.32 -0.81 0.19
-1.94 -0.55 3.75 3.5 1.51 -1.14 2.21 2.68 -1.56 -2.51 0.66 -0.52 -0.68 -0.64 - - -0.95 -0.29 -4.02 -5.16 -2.42 -3.03 -3.15 -3.32 -4.68 -4.56 -3.87 -1.87 -2.99 -2.7 -2.76 -2.68 -3.77 -4.03 -4.26 -3.43 -3.25 -2.98 -2.52 -5.16 -4.11 -3.88 -4.37 -3.72 - - -1.29 -1.47 -2.62
-2.85 -0.75 1.55 4.07 3.81 0.79 2.26 2.64 -1.44 -6.34 -4.59 - - - - - -3.84 -4.6 - -8.25 -4.94 -3.94 -5.36 -5.29 - - - - -3.93 -3.89 - -2.94 - - - -3.91 -3.97 -3.36 - -3.81 -3.6 -3.25 -5.4 -7.13 - - -2.52 -3.44 -
LOC_Os09g38600.1 (LOC_Os09g38600)
-1.47 -1.15 3.29 3.66 3.19 2.01 1.83 2.41 0.4 -1.33 -1.26 -2.7 - -4.69 -2.6 -4.15 -4.92 -1.92 -2.48 -11.27 - -6.3 - -6.1 - -4.48 -3.92 - - - - -5.66 - - - - - - - - - - - -9.24 -3.85 -1.61 - -2.76 -
LOC_Os10g03280.1 (LOC_Os10g03280)
-2.15 0.79 3.14 4.03 3.77 -0.39 1.55 2.15 - -3.28 -4.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os10g21040.1 (LOC_Os10g21040)
-1.37 0.58 2.85 3.99 2.93 2.95 1.14 1.45 -0.04 -0.24 -2.17 -2.28 -3.58 -3.63 - - - -4.0 - -2.06 -4.7 - -5.87 -6.24 - - - - - - - - - - -1.91 - - - - -4.65 -4.4 -3.69 -3.15 -1.82 -2.67 - - - -
LOC_Os10g32020.1 (LOC_Os10g32020)
-2.21 -0.77 2.34 3.96 3.83 -1.29 2.39 2.73 -3.92 -3.29 -2.89 -4.71 -5.66 -2.83 - - -3.38 -1.3 - -10.02 -8.91 -9.63 -8.1 -7.17 -4.96 - - - - - - - -5.9 -5.74 - - - - - - - - - -7.3 - - -6.44 - -
LOC_Os10g32570.1 (SYCO ARATH)
-0.46 0.42 1.76 3.71 3.5 -2.11 2.02 2.58 -0.71 -2.69 -2.47 1.65 -3.49 - - - -2.84 -5.5 0.36 -2.52 -4.59 -5.16 -4.78 -3.02 -1.79 - -3.25 -4.08 - -4.09 -4.35 -2.38 -1.83 -3.67 -2.87 - -2.96 - - -4.7 -7.39 -5.55 -5.0 -2.13 -0.74 -0.91 - - -
LOC_Os10g35310.1 (LOC_Os10g35310)
-2.47 0.7 3.71 4.42 1.35 -1.87 1.73 1.69 -0.68 -4.13 -1.32 -1.98 - -2.27 - - - -0.97 - - - - - -6.25 - - - - - - - - - - - - - - - -5.66 -6.17 - - -3.84 -1.08 -1.12 -1.72 - -
LOC_Os10g38070.1 (LOC_Os10g38070)
-2.44 -2.01 3.06 3.51 4.39 -1.28 1.45 1.59 -3.41 -4.26 -1.89 -2.92 - - - - -5.43 -3.27 - -4.28 -4.94 -5.11 -5.28 -4.68 - - - - - - - - - - - - - - - - -5.34 - - - - -3.65 -2.22 -0.68 -
LOC_Os11g05600.1 (LOC_Os11g05600)
-1.52 -1.15 0.89 3.87 2.82 3.53 -0.24 -0.63 -2.61 -1.73 -0.64 - -3.42 -2.13 - -3.95 -2.63 -1.62 -0.69 -2.69 -8.38 -7.37 -8.14 -7.82 -2.92 -2.89 -3.3 -5.01 -5.55 - - -5.65 - -5.61 - - - - -5.31 -8.01 -7.18 -8.75 -6.81 -1.65 -1.62 -1.85 1.7 1.52 0.3
LOC_Os11g06050.1 (LOC_Os11g06050)
-4.71 0.84 3.56 3.87 2.64 -0.96 2.2 2.25 -2.23 - -3.78 -2.34 - -1.74 - 1.65 -3.66 - - -7.24 - - - -4.05 - - - - - - - -1.74 - - - - - - - - -5.2 - -4.25 -2.5 - - - - -
LOC_Os11g07480.1 (LOC_Os11g07480)
-0.49 -0.55 2.4 2.91 3.77 3.46 0.85 0.94 -0.05 -5.82 -2.7 -0.84 -4.76 -3.63 -2.66 -3.24 -1.58 -1.82 0.78 -3.38 -6.09 -6.7 -7.62 -6.33 -3.11 -4.06 -3.39 - -6.44 - - -5.72 - -4.92 -6.31 - - - - -7.85 -6.05 -7.27 -6.76 -3.26 -1.89 -1.42 -1.23 -2.04 -3.39
LOC_Os11g11240.1 (LOC_Os11g11240)
-1.63 -1.72 1.65 3.4 3.07 1.67 0.64 1.09 -1.9 -1.08 -0.44 -0.32 - -5.15 1.39 2.14 -4.91 -1.97 -2.34 0.15 -3.66 0.05 -2.17 -5.48 -0.41 0.92 0.42 -3.77 - -1.84 -2.63 -8.69 -2.73 -6.37 -5.45 -2.16 -2.03 -3.45 -2.26 -2.95 -2.55 -2.06 -2.03 -3.35 -1.1 -1.66 - - -
LOC_Os11g42210.1 (LOC_Os11g42210)
-2.29 2.4 2.55 4.28 3.09 -0.04 1.72 1.62 - - -4.34 - - -2.24 - - - -3.78 - -4.62 -4.03 -4.72 -4.61 - - 0.56 - - - - - -2.77 - - - - - - - - - - -3.79 -2.51 - - - - -
LOC_Os11g42310.1 (LOC_Os11g42310)
-2.13 1.43 1.89 4.37 3.22 2.2 1.4 1.75 -2.64 -4.78 -3.94 -2.34 -2.2 -3.14 - - - -3.61 - -3.74 -4.78 - - -6.21 - -1.51 -2.48 - - - -2.24 -4.24 - - - - - - - - - - - -4.59 - - - - -
LOC_Os12g37480.1 (LOC_Os12g37480)
-4.72 -4.08 2.89 4.4 3.69 2.45 -0.07 -0.01 - -4.91 -3.19 - - -7.59 - - -10.65 - - - - - - - - - - - - - - - - - - - - - - - - - - -10.47 - - - - -
LOC_Os12g43990.1 (LOC_Os12g43990)
-3.06 -3.19 2.45 3.78 3.97 0.61 2.26 2.47 -3.64 -5.3 -2.06 -3.57 -4.8 -4.18 -6.22 - -3.16 -2.78 -3.53 -4.13 -8.22 -9.03 -8.03 -9.9 -1.33 -7.67 -7.54 - -7.44 - - -9.3 - - -7.05 - -7.47 -7.61 -5.71 -8.53 -8.56 -8.43 -10.03 -4.28 -4.65 -5.87 -2.72 -1.84 -3.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.