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Heatmap: Cluster_64 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Trophophore
Sporophore with Sporangia
Petiole
Rhizome
Root
-5.61 -3.47 -1.68 1.95 -0.47
-4.61 -0.19 -1.64 1.31 0.35
-4.74 -1.26 -2.71 1.49 0.66
-3.12 -2.74 -2.41 1.92 -0.41
-3.51 -2.18 -0.54 1.65 -0.23
-0.85 -0.11 -0.52 1.01 -0.31
-3.71 -1.91 -1.84 1.53 0.58
-2.19 -0.52 -2.02 1.2 0.61
-3.7 -1.91 -2.94 1.45 0.84
-1.42 -0.93 -1.06 1.28 0.25
-2.88 -0.87 -0.61 1.33 0.19
-2.88 -3.02 -1.72 1.94 -0.74
-6.77 -5.98 -1.22 1.95 -0.55
-9.0 -2.14 -2.34 1.89 -0.18
-4.73 -3.11 -0.79 1.65 0.18
-2.32 -1.08 -0.7 1.33 0.26
-6.16 -2.76 -0.93 1.84 -0.43
-3.6 -5.19 -3.57 2.01 -0.39
-9.86 -12.9 -5.65 1.99 -0.01
Ore_g13626 (PDR6)
 -8.52 -2.35 -4.22 1.8 0.33
- -3.54 -2.06 1.7 0.5
-4.72 -0.59 -2.16 1.27 0.73
-4.76 -0.48 -2.19 1.28 0.67
-3.16 -2.16 -2.63 1.73 0.23
- - -4.36 1.84 0.46
-2.89 -3.97 -1.55 1.69 0.31
- - -0.82 1.97 -0.99
Ore_g14937 (LPP2)
 -4.82 -1.73 -2.18 1.46 0.75
-7.42 -1.38 -3.04 1.63 0.48
-2.35 -0.04 -1.19 1.36 -0.27
-4.71 -2.13 -0.28 1.9 -2.55
-8.87 -1.44 -3.03 1.8 0.03
-1.13 -0.69 -0.77 1.28 -0.13
Ore_g16395 (FMA)
 -4.04 -3.61 -0.52 1.52 0.36
-7.22 -4.21 -1.38 1.9 -0.28
-0.53 -0.3 -0.24 0.69 0.04
-4.67 -4.37 -1.48 1.91 -0.32
-8.59 -1.62 -2.54 1.52 0.7
-1.09 -2.99 -1.4 1.55 0.13
Ore_g19356 (RCD3)
 - -3.9 -1.13 1.75 0.17
- -3.09 -2.35 2.04 -0.78
Ore_g19667 (CDC20.2)
 -1.97 -0.48 -0.82 1.07 0.45
-4.62 -4.8 -1.29 2.0 -0.95
-1.52 -0.28 -1.26 1.15 0.25
- - -1.68 2.07 -1.04
- - - 2.23 -1.63
-2.95 0.23 -3.75 1.49 -0.29
-3.48 -0.36 -2.79 1.45 0.33
- - -2.83 2.08 -0.66
-2.39 -0.89 -5.55 1.58 0.33
-4.33 -3.42 -2.79 1.88 0.04
- - -1.24 2.15 -2.86
- -7.99 -4.62 2.07 -0.39
- -1.55 -2.19 1.41 0.83
-4.89 -1.94 -1.12 1.39 0.7
-3.58 -1.49 -1.79 1.37 0.75
-3.48 -0.64 -2.53 1.52 0.29
- - -5.49 2.14 -0.84
- -0.78 -2.05 1.81 -0.59
- -0.53 -1.93 1.76 -0.58
- -1.21 -2.17 2.06 -2.49
- -1.48 -2.04 1.86 -0.39
- -5.7 -5.04 1.86 0.4
-3.09 0.04 -1.19 1.24 0.08
- -2.77 -2.52 1.52 0.86
-5.93 -5.75 - 2.0 -0.04
- -2.41 -3.49 1.63 0.7
- -1.55 -2.38 1.6 0.53
- -4.28 -1.12 1.78 0.08
-2.05 -1.56 -1.07 1.64 -0.26
- 0.2 -0.66 1.63 -2.92
-4.59 -0.54 -4.05 1.48 0.5
-7.47 0.02 -2.53 1.38 0.26
-1.54 -0.32 -2.14 1.16 0.48
-2.04 -0.44 -2.81 1.5 0.07
-1.65 -1.97 -1.33 1.18 0.82
-0.66 -0.48 -1.05 1.24 -0.3
-3.81 0.26 -1.14 1.55 -1.52
- 0.12 -3.74 1.24 0.56
-2.01 -2.36 -0.74 1.52 0.12
- -1.1 -2.24 1.86 -0.53
-7.12 -1.47 -3.3 1.79 0.11
-2.69 -2.78 -2.27 2.05 -1.56
- - -2.32 2.0 -0.33
- - -1.94 2.03 -0.59
Ore_g23779 (EM6)
 - 0.15 -6.33 1.82 -1.51
-1.29 -0.64 -2.04 1.57 -0.43
- - -4.1 2.24 -2.3
- - -1.05 2.12 -2.59
- -2.48 -3.17 1.94 -0.2
-5.14 -2.23 -2.42 1.63 0.57
- -1.63 -2.32 2.13 -3.15
- -0.35 - 1.93 -1.31
-2.81 -1.35 -1.04 1.55 0.06
- - -3.45 2.24 -2.56
- -0.32 -5.18 1.7 -0.12
-4.72 -3.34 -1.68 1.61 0.58
Ore_g24682 (EM1)
 -7.42 -5.07 -2.53 2.01 -0.4
- -1.28 - 2.07 -1.39
-3.0 -1.52 -0.97 1.57 0.07
-1.11 -0.46 -1.48 1.09 0.4
- -3.29 -1.04 1.62 0.42
- -1.28 -3.46 1.61 0.53
- -1.95 -1.56 1.61 0.42
-3.22 -0.94 -1.45 1.41 0.43
-2.12 -1.28 -2.16 1.72 -0.24
Ore_g25276 (GAMT2)
 -0.47 -0.16 -1.34 1.08 -0.2
-4.75 -1.98 -1.05 1.42 0.64
- -3.78 -2.99 1.65 0.74
-0.42 -0.35 -1.19 1.01 0.03
-3.52 -2.34 -1.79 1.59 0.51
-6.38 -1.41 -1.4 1.37 0.71
-2.81 -0.23 -3.58 1.64 -0.31
- - -1.22 1.76 0.25
-3.95 -3.97 -1.66 2.08 -1.59
- -5.04 -2.55 2.04 -0.52
-3.8 -1.0 -1.87 1.59 0.21
-5.39 -1.87 -0.98 2.07 -
Ore_g28788 (HSD1)
 -8.43 -0.02 -4.6 1.65 -0.25
-8.89 -0.88 -3.37 1.84 -0.38
Ore_g29072 (TET1)
 -3.4 -1.0 -0.73 1.54 -0.17
Ore_g29134 (TIP1;3)
 -7.14 -3.11 -1.9 1.49 0.84
-1.38 -3.0 -1.76 1.64 0.11
- -5.19 -1.84 2.03 -0.7
Ore_g29929 (PER1)
 -8.43 -2.04 -3.72 1.56 0.79
-2.67 -0.11 -1.45 1.3 0.12
- -5.12 -3.36 2.14 -1.06
- -5.69 -1.69 1.95 -0.31
-0.57 -1.03 -0.77 1.46 -0.99
-4.36 -1.6 -2.79 1.48 0.76
-3.44 -2.32 -2.38 1.51 0.73
- - -7.23 2.24 -1.87
- -0.02 -1.13 1.34 0.03
-9.41 -0.76 -2.93 1.72 -0.03
Ore_g30836 (SIP1)
 -0.77 -1.17 -1.74 1.32 0.23
Ore_g31247 (RCD3)
 -6.36 -10.07 -3.51 1.81 0.47
- - - 1.98 0.09
- -0.46 -4.48 2.04 -3.21
-4.54 -3.59 -2.94 2.17 -1.96
-6.59 -0.74 -2.31 1.48 0.48
-7.66 -3.43 -4.12 2.18 -1.62
- -4.45 - 1.82 0.51
Ore_g32202 (THA2)
 -2.72 -0.87 -1.94 1.26 0.72
-3.81 -1.66 -1.43 1.86 -0.73
- -3.37 -1.48 1.56 0.67
Ore_g32690 (HSP17.6)
 -1.49 -0.41 -1.37 1.24 0.2
-0.98 -0.93 -1.28 1.09 0.51
-2.17 -3.43 -4.48 1.85 0.06
- -5.35 -0.8 1.59 0.47
-2.68 -1.43 -0.7 1.41 0.27
- -1.51 -6.93 1.94 -0.31
- -4.89 - 2.01 -0.1
- - -3.91 1.95 0.09
-4.45 -1.52 -2.14 1.98 -1.2
-4.79 -1.22 -1.87 1.58 0.34
- -5.09 -2.32 1.55 0.87
-6.7 -0.5 -3.12 1.46 0.51
-9.05 -0.16 -3.08 1.33 0.56
Ore_g36465 (DFL1)
 -2.06 -2.84 -0.82 1.67 -0.22
-3.45 -3.22 -2.67 1.91 -0.17
- -3.24 -1.42 1.83 -0.06
-2.38 -1.2 -2.78 1.79 -0.39
-1.87 -0.24 -0.55 1.07 0.12
-2.89 -1.32 -1.83 1.63 0.11
- -0.2 -2.11 1.55 -0.03
- -3.26 -1.39 1.79 0.09
- -1.02 - 1.57 0.61
- -2.57 -2.55 1.77 0.33
- -0.93 -2.0 1.73 -0.15
-4.71 -3.68 -1.93 2.15 -2.39
-8.94 -1.68 -1.89 1.76 0.04
-7.41 -1.77 -5.4 1.96 -0.37
-2.16 -0.26 -2.29 1.57 -0.38
-1.61 0.11 -1.1 1.1 -0.03
-3.7 -0.85 -2.32 1.69 -0.09
-1.74 -1.26 -1.73 1.38 0.47
-1.94 -0.6 -0.81 1.24 0.2
-4.05 -3.6 -1.26 1.95 -0.79
- -1.98 -2.83 1.65 0.56
-8.76 -0.47 -3.24 1.63 0.1
- -0.87 -3.43 1.82 -0.29
Ore_g44241 (HSD1)
 -7.93 -2.11 -3.94 1.73 0.46
- -0.12 -3.94 1.64 -0.17
-1.53 -1.52 -2.15 1.56 0.16

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.