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Heatmap: Cluster_1 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Trophophore
Sporophore with Sporangia
Petiole
Rhizome
Root
2.21 -3.05 - - -1.97
2.32 - - - -
2.29 - -3.24 - -
Ore_g00141 (RBOHF)
 0.97 -0.5 0.25 -1.1 -0.55
1.58 -0.96 -0.81 -1.12 -1.11
1.28 -0.78 0.55 -1.49 -2.54
1.73 -0.42 -0.15 -4.85 -
1.48 -0.11 0.31 -4.94 -6.56
1.48 -0.51 0.55 -5.06 -6.77
0.79 0.01 0.03 -0.56 -0.82
1.31 -0.51 -0.16 -1.51 -0.83
0.81 -0.72 -0.08 -0.51 -0.01
2.21 -2.67 -2.25 - -
1.94 -1.81 -0.31 -4.57 -5.86
1.36 -1.54 0.73 -1.51 -3.67
1.21 -0.22 0.47 -3.02 -1.63
1.33 0.08 0.04 -2.2 -2.38
1.87 -0.5 -1.04 -2.75 -
1.59 -0.81 -0.45 -2.08 -1.12
1.44 -0.44 0.04 -1.69 -2.26
1.4 -1.58 -0.05 -0.56 -1.38
1.04 -0.38 -0.15 -0.69 -0.6
1.53 -0.11 -0.23 -2.39 -2.78
1.3 -2.48 0.12 -0.93 -0.42
Ore_g01074 (HMA5)
 1.87 -0.48 -0.83 -4.27 -5.44
1.68 -0.68 0.11 -3.28 -
1.69 -0.13 -1.19 -3.95 -1.51
1.54 -0.53 -0.58 -1.4 -1.51
1.35 -1.09 -0.19 -0.24 -1.94
0.88 -0.32 0.3 -1.27 -0.51
1.26 -0.86 0.2 -1.55 -0.84
1.8 -1.08 -0.14 -3.64 -4.35
1.85 -3.04 -0.52 -1.49 -2.18
1.79 -1.57 -0.24 -1.5 -
1.6 -0.23 -0.04 -2.85 -
1.11 -1.36 0.44 -1.38 -0.51
1.45 -0.33 0.17 -2.11 -3.2
2.16 -3.75 -1.12 - -
1.44 0.46 -0.15 -5.82 -
1.77 -1.09 0.04 -4.65 -4.04
1.19 -0.05 0.32 -2.35 -1.68
1.29 -0.72 0.69 -1.89 -3.83
1.94 -2.28 -0.21 -4.91 -3.8
1.26 -0.04 0.04 -2.11 -1.43
1.58 -0.44 -1.57 -0.38 -2.53
1.34 -1.08 0.38 -1.8 -1.28
1.46 -0.92 0.44 -2.23 -2.7
1.31 0.2 -0.06 -1.54 -4.05
1.32 -0.47 -0.2 -1.47 -0.85
1.23 -0.27 0.06 -1.72 -1.08
1.04 -0.56 0.22 -0.73 -1.01
2.15 -1.86 -2.08 -3.96 -
0.77 -0.31 0.15 -0.75 -0.34
Ore_g03017 (STM)
 1.07 -0.28 0.32 -0.67 -2.32
1.54 -0.3 -0.17 -4.1 -1.6
2.02 -2.41 -0.4 - -
1.43 0.35 -0.36 -1.96 -
1.52 -0.05 -0.66 -1.7 -2.15
1.05 -0.5 -0.62 -0.69 -0.07
1.97 -0.82 -1.36 -4.16 -3.96
1.9 -3.25 -0.16 -3.53 -2.51
1.97 -1.32 -0.53 - -
1.85 -1.04 -0.37 -2.89 -
1.51 -0.19 -0.37 - -0.98
1.81 -0.22 -0.65 - -
1.62 -0.18 -0.1 -4.88 -3.69
1.64 -0.77 -2.18 -0.98 -0.79
1.74 0.15 -1.15 -3.49 -
1.53 -1.65 0.37 -2.32 -1.74
1.64 -0.01 -0.91 -1.84 -3.74
2.15 -0.84 - - -
2.24 - -1.79 - -
1.95 -1.24 -1.42 -3.53 -2.0
2.24 - -1.94 - -
1.89 -0.33 -1.09 -4.78 -
2.17 -1.02 - - -
2.26 -2.2 - - -
1.89 - 0.17 -4.78 -2.83
1.65 -0.66 -0.7 -1.44 -2.06
1.43 -0.37 0.19 -1.76 -3.49
1.02 -0.44 0.09 -0.91 -0.64
1.69 -2.51 -0.48 -2.3 -0.59
1.82 -0.39 -1.0 -2.93 -3.66
1.59 -1.66 -0.01 -2.24 -1.09
1.94 -0.6 -1.92 -3.7 -2.52
2.0 -3.12 -0.16 - -
2.05 -0.94 -1.54 - -
1.51 -0.58 -0.04 -1.63 -2.39
Ore_g07387 (ELF4-L4)
 2.05 -1.5 - -0.97 -
2.23 -2.26 -4.29 -4.5 -
1.56 -0.66 -0.03 -1.53 -3.41
1.3 -0.57 0.33 -1.48 -1.98
1.62 -0.46 -1.38 -1.04 -1.58
1.69 -1.46 0.5 - -
1.81 -0.2 -0.7 - -
1.62 -0.7 0.06 -1.98 -5.47
2.32 - - - -
2.23 -2.31 -3.38 - -
2.13 -1.34 -2.15 - -
0.99 -0.64 -0.08 -0.66 -0.34
2.19 -4.95 -1.33 - -
0.94 -0.67 0.09 -0.69 -0.39
1.27 -0.71 0.78 -1.99 -6.83
1.66 -0.54 -0.07 -2.39 -
2.08 -3.33 -2.71 -3.16 -1.25
2.01 -2.23 -1.0 -1.98 -
1.76 -0.11 -1.86 -1.93 -2.69
Ore_g11643 (PDI9)
 2.32 - - - -
1.63 -0.29 -0.04 -4.23 -3.95
1.5 -0.79 0.44 -5.31 -2.31
1.32 -0.77 0.19 -1.57 -1.21
1.49 -1.1 0.4 -2.3 -2.24
0.72 -0.04 -0.15 -0.34 -0.53
1.42 -0.78 0.55 -2.37 -3.41
1.33 -1.33 0.49 - -0.56
0.85 -0.02 -0.02 -0.76 -0.66
1.35 -0.1 0.51 -3.38 -
1.41 -0.56 -0.05 -1.05 -2.15
1.55 -0.2 0.02 -2.79 -4.68
1.63 -0.21 -0.14 -2.83 -
1.25 -1.47 0.84 -2.77 -1.6
1.28 -0.57 0.21 -1.04 -1.94
1.28 -0.97 0.82 -2.67 -2.72
1.94 -1.3 -0.76 -2.51 -
Ore_g15019 (LPR1)
 1.6 -1.25 -0.23 -1.31 -1.74
1.01 -0.11 -0.36 -0.93 -0.41
Ore_g15868 (PUB23)
 0.73 -0.37 0.33 -0.58 -0.66
1.39 -0.4 0.46 -3.3 -2.81
1.47 -0.33 0.45 -4.45 -5.31
0.8 0.07 -0.12 -0.81 -0.49
1.07 -0.43 0.58 -1.06 -2.44
1.0 0.24 -0.39 -0.75 -1.12
1.25 -0.37 0.43 -1.72 -2.3
1.78 -0.12 -0.85 - -3.71
1.74 -0.64 -0.59 -1.96 -3.4
0.92 -0.48 0.56 -0.96 -1.31
1.09 -0.55 -0.6 -0.66 -0.15
1.14 0.07 0.03 -1.56 -1.38
1.05 0.05 0.33 -1.45 -1.87
1.54 -0.08 -0.28 -2.81 -2.45
1.52 -0.58 -0.9 -1.07 -1.13
1.51 -0.19 -0.79 -0.73 -3.46
1.24 -1.02 0.07 -0.53 -1.33
0.7 -0.02 0.05 -0.54 -0.59
1.05 -0.22 0.12 -1.37 -0.75
1.66 -0.27 -0.26 -2.64 -
1.16 -1.21 0.65 -0.99 -1.91
1.92 -2.07 -1.15 -1.45 -2.52
0.87 -0.42 -0.18 -0.38 -0.36
1.08 -0.36 -0.93 -0.33 -0.34
1.08 0.35 0.06 -1.71 -1.94
1.47 -0.85 -0.23 -1.45 -1.12
1.34 -0.99 -1.2 -1.06 0.06
1.41 -0.45 0.25 -1.41 -4.65
1.38 -1.39 0.66 -1.35 -4.43
1.0 0.15 -0.03 -1.43 -0.9
1.42 -0.76 0.07 -1.87 -1.32
1.03 -0.52 0.36 -1.21 -0.88
1.34 -0.57 -0.09 -1.05 -1.43
1.69 -1.9 -1.89 -1.42 -0.22
1.0 -0.34 0.22 -0.69 -1.25
1.32 -0.66 0.06 -0.96 -1.68
Ore_g35435 (LBD39)
 1.6 -0.48 -1.2 -1.88 -0.88
1.32 -0.54 -0.69 -0.86 -0.62
1.12 -0.14 0.2 -1.92 -0.98
1.15 -0.47 -0.58 -1.16 -0.08
0.99 -0.24 -0.25 -0.73 -0.47
1.13 -0.19 0.33 -1.74 -1.39
1.98 -1.85 -0.55 -4.33 -4.12
1.59 -0.07 -0.25 - -2.27
1.3 -0.45 0.63 -1.95 -
1.47 0.04 -0.84 -1.18 -2.31
0.93 -1.0 0.49 -1.03 -0.5
1.59 -0.3 0.11 -3.25 -
1.4 0.02 -0.93 -0.79 -2.05
0.87 -0.25 0.22 -1.09 -0.52
1.46 -0.49 -0.43 -0.65 -2.75
1.94 -0.88 -0.82 -4.28 -
1.62 -0.3 -0.25 -2.36 -3.56
1.89 -1.4 -0.41 -4.36 -3.05
0.91 -0.13 0.01 -0.75 -0.74
0.92 -0.05 -0.03 -0.75 -0.8
1.4 -0.1 -0.5 -0.84 -2.6
1.31 0.32 0.09 -3.47 -3.01
1.64 -0.52 0.24 - -
1.21 -0.45 0.58 -1.4 -3.83
1.82 -0.15 -1.02 -4.94 -4.91

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.