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Heatmap: Cluster_29 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
24.96 41.34 25.61 40.13 27.6 11.68 13.21
36.47 41.45 36.69 43.64 30.78 27.16 20.59
13.15 24.25 18.07 18.31 13.05 8.8 9.04
21.34 23.73 23.3 23.93 21.7 17.22 18.51
6.89 7.94 6.43 8.22 6.35 4.51 4.84
Msp_g00979 (nPAP)
 18.29 16.76 16.43 17.8 14.03 9.27 9.25
13.12 13.98 11.01 12.83 5.81 5.75 7.55
20.9 29.97 25.31 31.09 19.62 12.32 14.68
46.88 50.46 32.28 52.04 16.35 11.48 0.15
13.73 19.31 14.03 16.48 13.0 8.21 9.89
Msp_g02862 (BAM1)
 12.89 28.71 14.78 30.74 8.25 7.67 0.85
23.39 28.9 25.27 28.31 19.96 13.29 13.77
19.27 41.92 30.44 37.58 20.26 14.54 16.72
87.46 103.01 81.68 84.48 68.19 45.69 35.48
6.09 7.71 6.68 7.28 5.94 5.07 5.04
Msp_g04899 (BMY8)
 33.09 38.73 35.79 39.93 29.41 20.82 23.54
54.92 86.28 62.1 80.52 54.84 34.37 29.11
38.91 48.54 34.35 44.0 34.86 21.64 18.93
98.5 103.16 98.44 97.25 69.09 55.79 45.29
2.49 3.88 2.86 4.29 2.84 2.29 2.09
33.5 42.44 33.71 40.18 33.76 23.03 31.02
Msp_g06798 (SKIP)
 24.38 24.68 24.62 26.33 21.14 17.32 18.23
Msp_g06856 (VIK)
 30.98 48.94 39.67 44.43 25.51 16.15 16.06
12.43 14.05 12.16 14.75 12.21 10.15 11.16
22.81 27.61 24.77 28.01 22.28 20.42 21.62
Msp_g09006 (HSF1)
 13.54 28.02 17.96 25.81 10.88 8.53 4.74
7.65 8.68 7.34 9.82 6.05 5.54 6.23
0.97 3.09 1.89 3.16 1.18 0.28 0.03
Msp_g11652 (RAB8C)
 14.63 17.01 11.26 15.5 9.86 11.21 10.53
17.92 16.87 14.11 17.05 11.25 11.29 11.73
Msp_g12827 (NAP14)
 27.06 30.62 26.69 31.52 23.86 23.52 21.26
Msp_g13197 (nPAP)
 16.22 16.89 14.0 15.76 12.73 7.81 10.16
Msp_g13245 (PHT4;5)
 19.66 23.72 19.91 20.26 20.6 12.24 13.41
14.19 15.91 13.77 14.7 9.55 6.41 8.07
75.85 114.8 75.97 105.08 81.25 69.68 60.43
6.83 14.0 6.27 10.65 6.71 1.9 3.39
Msp_g14148 (TRFL2)
 18.88 25.66 22.75 25.89 17.27 15.72 15.31
21.39 31.01 21.71 28.12 17.07 14.05 12.77
Msp_g14841 (EMB2780)
 3.63 5.25 4.71 5.54 3.24 2.36 3.55
13.01 12.78 12.43 12.57 11.25 8.18 9.56
2.15 3.7 3.64 3.29 0.35 0.72 0.83
2.41 3.11 2.95 3.16 2.05 1.14 1.64
19.84 36.99 23.86 39.43 27.27 17.62 20.17
2.79 2.32 2.28 2.73 0.79 0.82 1.67
1.78 4.73 2.21 5.08 0.0 0.0 0.05
41.51 54.01 30.32 54.72 1.08 0.66 2.71
8.07 11.97 9.61 9.99 5.21 4.58 7.05
20.41 27.27 16.14 22.86 8.77 5.42 10.55
3.45 7.33 5.21 6.15 3.19 1.59 2.81
60.17 80.4 56.04 69.04 46.32 35.57 34.25
Msp_g17401 (J20)
 31.59 43.7 13.74 41.45 0.61 4.51 8.31
5.12 4.79 4.86 5.11 0.45 0.47 2.09
7.48 7.38 4.64 7.8 0.28 0.35 2.35
6.04 11.02 6.41 9.62 3.58 3.79 2.83
Msp_g18909 (TGH)
 11.49 12.48 11.55 13.28 10.91 8.45 10.41
2.83 3.92 2.84 4.05 3.27 2.21 2.08
2.96 3.91 3.04 4.22 2.99 2.41 2.79
4.35 4.42 4.42 4.59 3.14 2.89 2.51
Msp_g20354 (CYTC-2)
 10.25 23.06 7.3 18.62 0.0 0.0 0.14
38.34 67.73 37.3 58.64 23.38 13.56 11.39
25.57 42.03 24.71 36.28 9.64 8.43 4.14
2.59 5.26 3.48 4.04 0.55 1.08 1.22
0.0 2.15 1.09 1.85 0.0 0.0 0.0
4.94 8.66 8.04 7.98 5.77 3.84 4.19
3.84 5.04 2.71 4.69 1.0 0.74 1.26
2.88 3.58 2.0 3.65 0.72 0.27 0.76
Msp_g21468 (HSFA6B)
 6.72 12.95 9.74 12.27 6.01 4.63 3.17
Msp_g21741 (Hsp70b)
 21.79 21.7 16.66 21.11 14.93 12.34 10.47
1.15 0.69 1.42 2.29 0.0 0.0 0.0
6.14 5.39 6.17 5.93 1.54 0.46 1.01
8.64 19.35 9.12 13.94 0.0 0.0 0.26
Msp_g22120 (MLS)
 1.26 2.41 1.13 2.36 0.0 0.0 0.0
Msp_g22286 (FDH)
 2.51 3.64 1.44 2.85 0.0 0.0 0.06
1.65 3.34 2.76 8.87 0.0 0.0 0.0
1.17 2.51 1.23 1.59 0.0 0.0 0.0
Msp_g22649 (HSP70)
 2.0 2.35 1.25 2.98 0.0 0.02 0.37
4.94 4.23 5.42 13.25 0.0 0.0 0.0
2.2 8.12 3.99 6.85 2.26 1.97 0.54
2.33 3.73 2.85 2.26 1.27 1.18 0.69
1.72 2.08 1.38 1.95 1.24 0.55 0.92
0.0 2.42 1.29 2.22 0.0 0.0 0.0
1.63 1.53 1.14 3.14 0.0 0.0 0.0
5.41 6.81 5.91 6.28 4.68 3.43 4.16
Msp_g24354 (SFR2)
 4.02 4.69 2.17 4.23 0.38 0.22 0.62
Msp_g24403 (ATG10)
 13.87 13.26 10.94 12.52 12.05 9.61 10.94
Msp_g24822 (CPK28)
 5.89 6.99 2.16 5.85 0.13 0.84 1.75
36.81 37.01 26.84 29.59 24.96 14.76 23.62
0.66 2.34 1.44 2.03 0.66 0.34 0.63
Msp_g25811 (SSADH)
 0.92 2.1 0.96 1.41 0.0 0.0 0.0
1.98 4.9 2.38 3.22 0.0 0.0 0.0
0.59 1.15 1.48 2.45 0.0 0.0 0.0
4.45 4.34 3.19 3.31 2.2 2.18 1.28
2.83 6.12 2.31 4.8 0.0 0.0 0.26
13.94 17.18 15.3 16.9 10.35 10.96 9.53
4.39 5.75 3.98 5.92 4.51 3.59 3.25
5.33 7.77 5.51 6.84 6.47 2.13 2.51
12.5 12.63 11.69 12.98 8.34 6.33 6.3
Msp_g27646 (NLA)
 17.6 35.72 25.31 32.11 19.44 15.74 17.32
4.99 6.66 6.01 7.22 4.52 3.85 4.38
21.4 20.48 13.89 15.35 12.95 7.99 8.76
24.74 28.52 19.28 27.45 0.33 0.39 0.57
10.76 13.75 10.67 14.21 6.2 3.88 8.77
12.14 11.41 13.59 11.13 7.33 6.58 9.46
Msp_g31433 (EMB2219)
 5.64 5.86 5.51 6.21 4.84 3.68 3.47
Msp_g31620 (CRR22)
 4.27 6.39 5.19 6.04 5.04 3.4 3.04
32.26 37.33 25.6 35.66 11.14 8.46 17.89
7.5 12.08 8.23 9.71 9.37 4.4 5.69
Msp_g35213 (CAT2)
 17.83 25.39 19.46 25.33 13.42 16.79 10.4
1.84 2.3 1.72 2.1 1.26 0.86 1.14
Msp_g36337 (XRCC2)
 10.74 11.74 11.58 11.39 8.6 8.09 8.55
33.88 73.8 43.97 71.24 29.48 20.62 8.97
1.11 4.14 1.52 2.72 0.1 0.0 0.3
4.56 4.97 2.8 4.22 1.99 1.32 0.43
4.6 11.31 4.97 9.26 0.0 0.0 0.0
4.52 6.62 4.32 4.5 1.95 0.55 1.47
3.09 3.61 3.39 3.71 2.93 2.55 2.58
7.07 8.77 6.79 8.64 2.9 3.46 5.82
3.7 4.21 2.38 8.39 0.0 0.0 0.0
Msp_g43970 (UGT85A1)
 21.93 20.88 15.16 22.93 13.43 8.76 4.73
6.71 7.9 7.45 7.59 3.81 3.28 4.77
Msp_g46155 (AAC2)
 2.5 4.21 1.9 3.56 0.0 0.0 0.3
0.87 1.24 0.8 2.68 0.0 0.0 0.0
4.28 3.51 4.15 3.61 1.94 1.27 1.01
2.71 6.48 3.19 3.97 0.0 0.0 0.0
3.19 6.71 2.76 5.29 2.2 0.69 0.48
15.85 19.4 15.86 19.93 14.05 11.01 9.81
45.71 51.02 42.67 55.8 40.59 33.33 38.51
3.81 5.08 2.15 5.34 1.34 0.65 1.61

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)