Heatmap: Cluster_161 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
1.55 -2.42 -0.24 -2.07 0.48 0.37 -3.27
1.7 -2.06 1.55 -3.45 -1.84 -2.32 -6.41
1.72 -0.78 0.82 -1.28 -3.16 -3.09 -0.5
Msp_g06249 (PSBA)
1.58 -1.11 1.16 -0.75 -1.74 -2.24 -2.38
1.36 -0.43 0.79 -0.77 -1.08 -1.18 -1.15
1.87 -3.04 0.64 -3.95 -0.96 -0.27 -1.97
0.74 -0.52 -0.04 -0.63 0.4 0.12 -0.73
1.72 -5.45 -0.16 - 0.43 0.52 -
1.71 -2.72 0.82 -4.39 0.05 -0.54 -4.98
Msp_g11768 (MIND)
0.52 -0.26 0.03 -0.25 0.05 -0.11 -0.13
1.95 -1.53 1.19 -1.17 -4.95 -5.69 -9.67
0.94 -0.88 0.15 -1.01 0.15 0.07 -0.37
Msp_g14145 (PDF2)
1.4 -1.35 -0.19 -1.46 0.48 0.24 -2.64
0.85 -0.73 0.06 -0.78 0.15 0.2 -0.51
2.07 -2.1 0.51 -2.73 -0.7 -2.77 -2.16
Msp_g20112 (TCP2)
1.96 -1.82 1.15 -2.32 -3.1 -2.5 -3.27
1.65 -1.84 1.14 -1.73 -2.25 -0.49 -2.77
1.72 -0.92 1.17 -1.53 -3.93 -3.17 -1.32
2.04 -2.72 1.36 -3.21 -3.84 - -
1.88 -1.76 1.08 -2.03 -1.11 -3.77 -2.93
1.52 -0.5 0.65 -0.74 -1.08 -1.14 -1.56
Msp_g27143 (KCS11)
1.63 -1.33 0.64 -0.99 -1.79 -0.68 -0.88
0.95 -0.17 0.2 -0.42 -0.31 -0.2 -0.71
2.04 -0.77 0.87 -2.15 -3.27 -2.96 -
2.11 - -0.17 - 0.31 -1.33 -2.71
1.17 -1.37 0.29 -1.62 0.1 0.09 -0.55
2.04 -3.8 0.98 -3.98 -2.7 -0.69 -
2.03 -2.07 1.23 -4.1 - - -1.92
1.76 -0.7 0.97 -1.26 -8.58 -5.68 -0.74
2.03 -1.99 0.7 -2.51 -1.18 -3.95 -1.43
1.13 -1.22 0.9 -0.94 -0.19 -0.83 -0.88
1.84 -3.81 1.35 -4.65 -1.2 -2.69 -2.49
Msp_g42663 (UGT85A2)
1.73 -2.0 0.78 -2.04 -0.76 -1.05 -1.39
2.02 -1.89 1.42 - - - -
Msp_g43391 (JAR1)
2.0 -9.52 1.5 -7.97 -3.1 -6.5 -5.11
Msp_g43817 (STI)
2.16 -3.19 1.11 -3.03 -7.0 -3.65 -3.91
1.91 -2.48 1.3 -3.15 -1.2 -5.09 -5.57
1.55 -1.18 0.5 -1.75 -0.51 -0.34 -1.19
1.32 -1.83 0.71 -1.22 0.19 -0.65 -1.41
2.13 -0.12 0.7 -3.61 - - -
1.34 -0.63 0.88 -1.87 -0.71 -0.03 -3.19
1.71 -1.47 0.98 -2.73 -0.96 -0.7 -3.04
1.32 -0.67 0.47 -0.82 -0.91 -0.14 -1.08
1.61 -2.74 1.43 -2.34 -0.81 -1.86 -4.13
1.62 -0.78 1.19 -1.02 -4.24 -2.11 -1.84
2.0 -2.79 1.11 -3.21 -0.99 -3.84 -5.63
0.87 -0.34 0.07 -1.16 0.12 -0.22 -0.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.