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Heatmap: Cluster_5 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
11.83 14.27 12.95 15.17 20.6 20.31 16.11
Msp_g00995 (NF-YA7)
 20.98 20.97 16.15 21.57 34.44 34.25 19.71
14.57 19.96 16.53 20.52 28.92 22.78 19.67
6.22 8.21 6.07 8.03 10.18 9.92 6.66
2.41 3.06 1.89 2.83 4.42 4.21 2.66
9.25 10.11 8.04 10.28 12.09 12.92 9.25
6.11 7.98 6.49 8.61 10.7 11.26 8.06
Msp_g06097 (SR30)
 60.68 68.99 54.09 70.21 81.36 90.2 64.81
1.79 3.88 2.82 3.79 6.84 5.82 3.11
Msp_g08862 (UNE6)
 26.65 26.48 24.46 27.36 31.75 31.65 25.35
7.48 8.91 7.17 8.32 10.29 11.7 8.27
11.28 12.24 10.57 13.61 17.83 18.72 12.09
18.2 21.26 16.25 21.96 25.87 24.59 20.78
Msp_g11440 (RXF12)
 6.17 9.02 6.5 9.41 12.51 12.95 9.71
15.11 18.24 13.84 18.83 20.76 23.31 16.65
0.42 0.96 0.09 1.11 4.38 2.94 1.37
7.58 8.58 7.03 8.97 10.49 9.76 7.14
6.6 6.79 5.84 7.15 9.55 9.76 6.91
11.85 14.92 11.61 15.4 24.32 22.25 15.9
Msp_g15727 (gsl12)
 14.62 17.9 14.31 19.58 22.62 27.72 17.42
Msp_g15765 (MEI1)
 3.61 4.32 3.16 4.52 5.4 5.57 3.83
Msp_g15916 (HIT1)
 11.76 13.42 11.09 13.37 19.78 19.97 12.92
5.68 6.09 5.07 6.18 7.77 7.25 5.19
7.32 13.48 5.11 11.02 22.23 20.3 9.46
5.62 7.01 4.61 7.21 14.11 15.09 7.14
44.6 53.99 42.66 56.04 67.65 66.99 51.69
4.36 5.71 4.33 6.21 8.41 8.08 5.94
0.19 0.83 0.48 1.2 4.09 2.97 1.27
2.72 4.62 1.48 6.64 21.53 14.74 6.53
5.12 5.86 4.71 6.56 7.54 7.66 5.36
0.93 1.15 1.24 1.36 2.5 2.02 1.23
Msp_g26617 (ATZW10)
 8.87 10.42 8.59 11.02 12.33 14.41 10.62
0.18 0.84 0.16 0.58 1.91 2.83 1.07
3.3 3.56 2.22 4.02 5.35 5.92 2.66
0.82 1.53 0.33 1.35 4.18 3.04 1.56
2.21 4.29 3.07 4.83 11.76 9.1 5.65
Msp_g39973 (PMH2)
 21.75 19.3 23.13 22.63 48.33 30.44 23.54
6.83 7.59 6.5 8.07 10.39 11.02 7.48
6.89 8.29 6.48 8.67 9.54 8.59 6.8
6.31 8.25 5.86 8.23 10.84 10.32 7.57
Msp_g46171 (CCR1)
 113.79 142.69 116.07 161.37 211.04 187.34 147.83
Msp_g47484 (YUC11)
 0.07 0.47 0.82 0.51 2.44 1.47 0.81
Msp_g48592 (APTX)
 22.27 24.87 18.32 25.24 30.34 30.19 24.65

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)