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Heatmap: Cluster_142 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

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Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
1.0 0.82 0.75 0.77 0.38 0.67 0.63
1.0 0.74 0.75 0.82 0.4 0.56 0.6
1.0 1.0 0.85 0.96 0.7 0.81 0.79
Msp_g00776 (MAPR2)
 1.0 0.73 0.66 0.72 0.42 0.67 0.51
Msp_g01496 (SC3)
 1.0 0.88 0.85 0.91 0.58 0.83 0.7
Msp_g01927 (SOS4)
 1.0 0.91 0.87 0.92 0.63 0.76 0.68
1.0 0.81 0.66 0.79 0.47 0.63 0.45
Msp_g02248 (YLS8)
 1.0 0.91 0.88 0.88 0.7 0.98 0.83
Msp_g03444 (RABA4D)
 1.0 0.79 0.73 0.82 0.25 0.55 0.55
Msp_g03522 (PYD2)
 1.0 0.67 0.71 0.66 0.44 0.51 0.55
1.0 0.53 0.59 0.61 0.36 0.48 0.41
1.0 0.92 0.73 0.93 0.56 0.67 0.64
1.0 0.83 0.85 0.8 0.69 0.79 0.73
Msp_g06494 (CSI1)
 1.0 0.95 0.83 0.92 0.67 0.89 0.74
Msp_g07410 (SEP2)
 1.0 0.58 0.57 0.62 0.28 0.43 0.55
1.0 0.88 0.8 0.87 0.61 0.86 0.74
1.0 0.86 0.85 0.9 0.56 0.78 0.73
Msp_g08165 (RH8)
 1.0 0.89 0.81 0.91 0.65 0.83 0.76
Msp_g08868 (SUC4)
 1.0 0.88 0.82 0.94 0.61 0.81 0.77
Msp_g09212 (NHX1)
 1.0 0.97 0.81 0.93 0.45 0.68 0.52
1.0 0.94 0.84 0.92 0.59 0.68 0.73
1.0 0.6 0.74 0.74 0.28 0.62 0.41
1.0 0.73 0.82 0.84 0.57 0.83 0.77
Msp_g10691 (ARI8)
 1.0 0.78 0.79 0.79 0.57 0.69 0.74
1.0 0.95 0.87 0.96 0.64 0.89 0.77
Msp_g10995 (IGPD)
 1.0 0.81 0.79 0.81 0.55 0.64 0.68
1.0 0.64 0.62 0.65 0.36 0.54 0.54
Msp_g11463 (CDS2)
 1.0 0.66 0.69 0.69 0.44 0.54 0.55
Msp_g11510 (MPK2)
 1.0 0.81 0.8 0.84 0.58 0.71 0.7
1.0 0.89 0.87 0.82 0.6 0.71 0.72
1.0 0.86 0.74 0.81 0.64 0.87 0.73
Msp_g12697 (COV1)
 1.0 0.76 0.73 0.77 0.4 0.66 0.54
Msp_g14845 (PUB49)
 1.0 0.79 0.79 0.85 0.64 0.7 0.7
Msp_g15059 (GLR3.3)
 1.0 0.62 0.68 0.67 0.47 0.51 0.47
1.0 0.87 0.69 0.89 0.59 0.87 0.72
1.0 0.8 0.8 0.81 0.65 0.9 0.7
1.0 0.95 0.85 0.95 0.69 0.79 0.81
Msp_g24203 (NFU4)
 1.0 0.8 0.74 0.77 0.52 0.67 0.66
1.0 0.85 0.73 0.88 0.44 0.59 0.66
1.0 0.78 0.7 0.85 0.11 0.37 0.48
1.0 0.73 0.74 0.72 0.5 0.64 0.56
Msp_g44046 (LSD1)
 1.0 0.83 0.85 0.87 0.65 0.86 0.76
1.0 0.53 0.42 0.5 0.34 0.44 0.4

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)