Heatmap: Cluster_27 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
0.01 -0.15 -0.11 -0.03 -0.12 0.15 0.2
-0.09 -0.11 -0.2 -0.04 -0.07 0.17 0.29
0.06 -0.19 -0.18 -0.15 -0.1 0.27 0.22
-0.04 -0.2 -0.12 -0.14 -0.09 0.36 0.15
0.08 -0.17 -0.59 -0.2 -0.07 0.57 0.11
-0.05 -0.45 -0.34 -0.26 -0.38 0.62 0.46
Msp_g03510 (CID12)
0.21 -0.29 -0.22 -0.2 -0.23 0.19 0.38
0.13 -0.34 -0.47 -0.04 -0.18 0.29 0.4
0.06 -0.11 -0.19 -0.02 -0.33 0.18 0.32
0.18 -0.17 -0.23 -0.16 -0.19 0.21 0.27
0.03 -0.17 -0.12 -0.11 -0.23 0.17 0.33
0.16 -0.22 -0.21 -0.16 -0.22 0.29 0.25
0.13 -0.13 -0.21 0.01 -0.16 0.1 0.21
-0.02 -0.05 -0.14 0.02 -0.1 0.22 0.04
Msp_g06595 (SMU1)
-0.08 -0.1 -0.17 -0.15 -0.15 0.18 0.37
0.01 -0.13 -0.1 -0.08 -0.16 0.2 0.2
0.14 0.0 -0.16 -0.11 -0.4 0.17 0.25
0.25 -0.26 -0.26 -0.24 -0.17 0.16 0.35
0.06 -0.18 -0.15 -0.05 -0.07 0.27 0.07
Msp_g10952 (SEC10)
0.05 -0.11 -0.11 -0.06 -0.13 0.22 0.11
-0.01 -0.2 -0.12 -0.16 -0.21 0.19 0.4
-0.02 -0.13 -0.09 -0.07 -0.2 0.32 0.12
0.13 -0.07 -0.19 -0.07 -0.29 0.15 0.27
Msp_g12690 (MNS3)
-0.04 -0.2 -0.22 -0.11 -0.23 0.37 0.29
Msp_g13153 (SEC5A)
-0.01 -0.15 -0.32 -0.06 -0.06 0.22 0.29
0.04 -0.22 -0.09 -0.13 -0.26 0.27 0.3
-0.19 -0.1 -0.28 -0.12 -0.3 0.29 0.48
Msp_g14875 (SCD1)
0.05 -0.04 -0.17 -0.02 -0.21 0.28 0.07
0.07 -0.16 -0.22 -0.14 -0.21 0.29 0.26
0.08 -0.15 -0.21 -0.12 -0.1 0.3 0.13
0.03 -0.07 -0.14 -0.05 -0.15 0.21 0.13
0.16 -0.16 -0.23 -0.24 -0.24 0.3 0.27
-0.08 -0.25 -0.17 -0.05 -0.33 0.2 0.49
0.1 -0.12 -0.03 -0.08 -0.39 0.28 0.15
0.2 -0.09 -0.36 -0.25 -0.26 0.45 0.11
Msp_g25011 (RAD23)
0.05 -0.17 -0.18 -0.08 -0.06 0.31 0.06
Msp_g25582 (CASP)
0.06 -0.06 -0.18 -0.03 -0.21 0.16 0.21
0.16 -0.22 -0.42 -0.39 -0.19 0.39 0.41
0.11 -0.1 -0.06 -0.21 -0.47 0.34 0.24
-0.62 -1.75 - -0.42 -1.25 0.78 1.66
Msp_g32602 (TMT2)
-0.15 -0.13 -0.22 0.02 -0.23 0.27 0.32
0.47 -0.27 -0.73 -0.16 -0.32 0.61 -0.06
0.16 -0.03 -0.55 -0.04 -0.4 0.51 0.1
-0.13 -0.31 -0.3 -0.07 -0.12 0.37 0.38
0.51 -0.72 -1.53 -0.2 -0.27 0.85 0.16
0.01 -0.22 -0.33 -0.12 -0.13 0.46 0.17
0.37 -0.52 -0.66 -0.21 -0.02 0.72 -0.18
Msp_g47800 (GRIP)
0.03 -0.21 -0.18 -0.17 -0.17 0.37 0.22

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.