Heatmap: Cluster_130 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
AT1G01600 (CYP86A4)
-2.42 -3.82 -6.92 -9.25 - -5.76 -3.28 -6.98 -8.42 -7.35 -7.92 -9.73 - 0.27 -8.22 -2.76 -2.85 -3.65 -3.69 0.05 -2.52 2.7 2.53 3.99 2.27 -1.34 -1.93 -4.87 0.7 -8.67 0.51 -3.5 0.04 -6.2 -1.37 -4.3 -3.55 -2.87 -2.67 -1.75 -2.94 -1.67 -2.07 0.09
AT1G10060 (BCAT-1)
-7.25 - - - - - -0.85 -0.08 -1.4 -1.54 -1.79 -0.34 1.8 -0.68 -6.24 -3.32 -4.83 -1.49 -0.03 1.19 -1.43 2.79 1.93 1.75 1.57 0.36 -0.45 -2.87 2.43 -6.81 -0.7 -6.16 -1.12 -3.22 1.57 0.02 -9.37 -8.54 -2.46 -2.29 -0.38 -0.72 -1.11 -1.25
AT1G13290 (WIP6)
- -0.79 - - - - -3.76 - - - - - - - - -1.83 -0.09 3.88 -0.93 - - 2.1 -2.61 -0.34 1.63 3.51 2.75 -3.25 - - - - -5.34 -3.16 - -4.3 - - - - - - -2.51 -
AT1G15360 (WIN1)
-6.21 -8.03 - - - - - - - - - - - -8.9 -4.73 -8.45 -6.53 -2.77 - -1.31 -9.22 2.29 2.44 4.44 2.66 1.42 -1.31 -5.0 0.77 - -5.5 -7.09 -7.62 -6.73 -8.74 -8.96 -4.37 -5.92 -10.25 -4.95 - - -6.16 -
AT1G24020 (MLP423)
-7.49 -6.09 -7.69 - - -13.02 -2.1 -12.74 -15.13 -13.3 -15.01 -13.11 - -2.93 -6.3 -1.96 -2.71 -0.25 1.0 1.13 0.74 1.92 2.19 2.3 3.15 0.61 1.93 0.09 0.82 -12.04 -0.72 -8.43 -3.03 -8.96 -12.04 -9.39 -10.35 -7.64 1.89 -2.12 -2.19 -1.54 -1.5 -0.85
AT1G26310 (CAL)
- - - - - - - - -7.93 - - - - -2.04 -3.07 -0.5 -0.58 2.62 2.49 3.83 1.75 2.56 0.78 1.05 0.79 -4.42 -2.31 -4.42 0.16 - -5.11 -6.15 -6.39 -6.91 - - - - -6.15 - - -5.01 -4.93 -
-2.02 -1.2 0.14 - - - - - - - - -1.85 - -0.49 - - - -2.08 -1.05 1.89 - 0.95 4.18 2.19 0.48 1.61 -2.81 - -2.14 - -2.44 - - - - -2.13 -2.54 - - -2.93 -1.29 0.5 1.37 1.15
AT1G49430 (LRD2)
-2.91 -2.01 -9.42 - - - -0.86 -3.87 -5.98 -5.33 -6.27 -4.35 -4.13 0.17 -6.72 -0.37 -0.2 0.35 0.52 0.85 0.38 0.94 1.71 2.59 1.17 -0.48 1.13 0.95 2.04 - 0.94 -6.43 0.27 -3.97 1.12 -2.3 -10.75 -6.97 1.18 0.32 -1.23 -1.03 0.06 -0.37
0.34 -1.02 0.37 0.24 1.58 0.35 0.51 -2.5 -3.17 -3.69 -3.92 -3.41 -0.83 0.16 -1.44 0.34 0.39 0.47 0.76 0.9 0.12 1.08 0.26 0.44 0.52 -1.13 0.45 0.5 0.14 -8.1 0.35 -4.97 0.53 -1.87 0.43 -1.54 -7.15 -5.74 0.44 0.37 -0.33 1.31 -0.77 0.24
- - - - - - - - - - - - - - - - -3.03 1.05 3.34 3.81 -0.21 - -0.13 - - - 2.96 - - - - - - - -0.29 0.92 - - -2.83 -2.61 - 2.35 - -
AT1G58430 (RXF26)
-5.91 - - - - - - - - - - - - -5.58 - -12.04 -9.78 -3.02 -1.16 -0.75 -0.43 2.59 4.18 1.88 3.39 0.36 -0.36 -3.27 -1.59 - -1.12 -9.39 -2.84 -9.08 - - - -7.25 -0.76 -6.92 - - - -
- - - - - -6.14 -1.34 - - - - - - -1.3 - -4.87 -4.92 1.46 2.34 3.82 -2.48 2.57 0.65 -0.13 0.37 -0.89 1.55 -6.25 -4.0 - -0.35 -4.76 0.29 0.29 -1.78 -7.3 - - -1.56 -4.98 -3.4 1.57 -0.63 -3.02
0.08 -0.51 -0.18 -0.43 1.04 -0.56 -0.53 -1.13 -0.83 -0.81 -0.93 -1.63 -0.85 -0.14 -0.5 0.22 0.49 0.73 0.51 0.12 0.04 1.3 -0.13 0.15 -0.25 0.12 0.77 0.47 0.49 -0.58 0.09 -1.38 0.0 0.46 0.84 -0.43 -2.14 -2.28 0.44 0.06 -0.77 0.94 -0.36 -0.4
AT1G63710 (CYP86A7)
-5.43 -6.64 - - - -9.4 -5.53 -7.22 -10.16 -7.12 -7.18 - - -0.26 - -5.77 -5.21 -4.11 -5.31 0.16 -1.78 2.08 3.03 3.72 3.27 -0.44 -2.9 -6.93 -0.3 - 1.2 - 0.71 - - -10.61 -8.98 -9.17 -1.87 -8.5 -4.93 -3.0 -2.25 -4.94
AT1G67260 (TCP1)
- - - - - - -5.71 - -7.19 -6.94 - - - -0.34 -0.89 -4.47 -0.72 2.69 1.66 4.75 -2.5 2.04 - - - -3.69 -7.32 - - - -6.34 - - - - - - - -7.78 - - -0.18 -2.19 -
AT1G69120 (AP1)
-7.37 - - - - - -9.53 - - -10.63 - - - -10.03 - -8.04 -8.0 2.04 -1.24 2.73 1.33 2.84 3.97 2.86 -3.63 -4.58 -4.7 -7.25 -6.79 - -5.51 -10.27 -6.89 -6.23 - -10.06 - -8.04 -11.6 -11.17 -9.48 -9.06 -7.72 -
-7.26 - -9.62 - - - 0.02 -3.53 -3.73 -3.87 -5.32 -4.26 -3.35 -2.33 -6.48 -1.92 -3.58 -2.07 -2.11 0.7 -1.51 1.34 3.91 1.96 2.62 2.13 -1.08 -3.95 -0.42 - -1.37 -7.26 -1.76 -5.94 -7.55 -1.23 -7.53 -7.57 -3.41 -0.42 -0.16 -1.29 -0.34 1.12
-8.58 - - - - -13.87 -12.44 -13.62 -13.77 -13.7 -12.25 -11.9 - -11.98 -9.84 -8.81 -8.49 -3.67 -8.01 -2.93 -7.31 0.8 2.74 3.95 4.08 1.08 -2.85 -5.46 -0.85 -11.87 -5.23 -7.91 -6.99 -8.08 -12.82 -10.93 -7.25 -7.94 -8.66 -8.28 -10.72 -7.87 -8.36 -13.92
-8.44 - - - - - -1.41 -7.64 -8.21 - -9.15 - - 1.27 - -4.19 -3.43 -0.68 1.82 2.42 0.82 2.65 2.15 2.58 2.91 -0.87 -0.27 -4.17 0.41 - -0.15 -8.71 -0.5 -8.64 - - - - -4.18 -8.86 -5.69 -0.71 -0.91 -
-8.7 -5.61 - - - - - - - -9.23 -7.68 - - -7.81 -7.71 -3.09 -3.09 -2.5 -4.45 -1.23 -0.03 3.01 3.08 3.22 2.52 1.21 -0.91 -2.09 2.33 - -6.18 -8.02 -8.87 -8.95 -4.47 -9.82 -8.27 - -3.3 -1.19 -2.78 -5.01 -4.97 0.71
AT3G04290 (LTL1)
-7.74 - - - - - -0.69 -11.14 - -11.26 - -7.3 - 0.37 -7.64 1.3 1.09 1.28 0.92 2.04 1.61 1.31 1.96 -5.67 -2.65 1.5 2.09 0.87 -3.49 - -1.43 -7.44 -3.45 -7.5 -3.16 -12.93 -8.71 -6.82 0.48 0.99 0.0 1.06 0.6 0.89
AT3G10000 (EDA31)
- - - - - - - - -6.86 - - -4.71 - -4.94 -3.42 2.63 2.55 1.93 2.13 -0.13 2.02 2.25 2.08 0.43 1.88 -1.95 -3.02 - - -3.86 -4.36 - -5.94 -0.89 -2.19 -3.35 - - - -2.38 -0.36 0.31 -0.14 -2.77
AT3G10570 (CYP77A6)
-8.91 - -8.11 -6.24 - -7.65 -4.69 -5.43 -5.04 -5.77 -5.3 -6.09 - -1.03 -5.5 -3.82 -3.65 -2.19 -2.52 0.2 -1.02 2.07 2.08 3.74 3.06 0.03 -0.12 -0.55 2.24 -7.89 0.36 -3.42 0.03 -7.19 -5.19 -7.12 -3.34 -3.65 -0.94 -4.96 -3.33 -2.73 -2.12 -5.39
-3.94 - -4.11 -4.0 - -4.58 -2.82 -3.38 -2.76 -2.45 -3.25 - -6.19 -1.66 -3.71 1.62 1.99 2.47 1.69 1.59 0.8 1.57 1.94 -0.18 -0.63 1.15 2.21 -0.63 0.65 -4.86 -0.12 -5.17 0.86 -1.94 -1.83 -5.06 - -6.24 -1.87 -3.38 -1.96 -3.59 -1.44 -1.88
-6.18 - - - - - - - - - - - - -1.32 - -6.04 -4.15 1.96 3.72 2.95 -1.02 1.77 -1.55 0.04 0.82 -1.27 3.11 0.39 - -3.84 -1.56 -4.87 -2.79 -6.38 - -3.13 -5.12 -2.88 -1.64 -3.88 - - - -6.4
AT3G15270 (SPL5)
-4.14 -4.93 -3.81 -3.71 - -4.57 -0.91 -2.02 -1.01 -2.21 -2.1 -0.96 - -4.8 -0.06 -6.38 -3.03 1.45 -0.08 -0.62 -0.96 1.85 3.4 1.2 -3.43 -1.03 2.79 0.51 2.71 -5.16 -1.51 -1.91 -2.19 -2.97 -2.39 -1.32 -0.63 -2.22 -0.68 -4.97 -3.63 -4.3 -2.0 -3.14
AT3G57130 (BOP1)
-3.14 - -4.35 - - -5.08 - - - - - - - -2.4 -5.12 2.89 3.04 2.53 -3.61 -3.23 0.4 2.03 1.06 0.3 2.22 -1.32 -3.83 - -2.61 - -6.07 - -7.25 - 0.83 -1.33 - - - -0.29 0.69 0.82 0.2 -1.21
-2.08 - - - - - - - - - - - - 0.99 - -0.9 0.17 1.1 2.54 1.42 2.24 1.17 -3.14 - - - -0.08 -0.6 - - 0.26 -2.27 0.44 2.77 -2.02 2.99 - - -1.2 - - -0.19 0.73 -4.03
1.71 -5.72 -2.21 1.33 - -0.42 -3.16 -6.69 - - - - - -1.58 -4.12 -0.58 -0.71 0.34 2.57 0.46 -0.6 1.39 2.83 2.39 0.77 -3.36 -1.63 -4.58 -0.23 - -2.44 - -3.05 - 1.51 -2.34 - -7.25 -6.91 -1.42 -1.92 -0.6 -0.4 1.46
AT4G16590 (CSLA01)
-9.39 - - - - - 1.79 - - - - - - -6.41 -9.64 -10.4 -9.0 -6.28 -7.03 -2.1 -5.92 1.49 3.04 3.39 3.29 -4.35 -2.34 -5.6 -0.6 - 1.39 -7.64 2.41 -7.56 - - - -7.97 -6.16 -7.76 - -4.12 -8.73 -
-2.07 -0.18 -8.1 - - - -2.69 -6.21 -6.04 -4.12 -4.61 -1.14 1.37 -3.5 - -9.65 -8.2 -5.75 -7.97 -1.35 -2.93 2.79 3.47 3.65 1.34 -3.17 -2.6 -3.08 0.89 - -2.91 -4.28 -4.2 -1.23 - -4.18 - -4.93 -4.35 -2.26 -0.79 -0.72 0.13 -1.68
-3.03 -1.55 -0.99 -0.34 - -1.39 -1.49 -0.55 -0.18 -0.09 -0.08 -3.39 - 0.96 -0.56 -1.08 -0.91 -0.41 -0.98 -0.16 0.34 -0.27 3.49 2.19 1.6 -0.59 0.46 -0.1 1.32 -1.5 -0.91 - -0.79 -1.83 -2.08 -0.45 - - -0.51 -3.3 -0.66 -0.95 -0.18 -1.85
- 2.22 - - - - 0.85 -1.73 -1.31 -2.08 -0.28 - - - 1.03 1.28 0.57 -0.63 0.34 1.52 0.57 - 3.48 2.45 0.0 0.71 -1.44 - -0.71 -0.5 - -0.74 - -0.56 - - - - -2.02 -1.45 - - -0.91 -2.5
AT5G20240 (PI)
-7.93 -8.88 -7.65 -5.06 - -6.74 -8.48 -7.37 -8.35 -7.32 -7.12 -10.18 -3.56 -11.32 -6.92 - -8.42 -0.5 -11.28 -5.24 0.84 2.35 -3.52 3.94 3.89 2.4 -3.57 -6.64 -7.35 -11.18 -5.23 -5.14 -5.38 -1.57 -6.72 -6.71 -7.64 -9.59 -9.17 -5.0 -6.75 -5.3 -6.07 -6.98
-7.86 - -11.19 - - -10.37 -2.24 -6.05 -7.69 -11.28 -9.96 -7.31 - 0.76 -10.14 0.07 -0.45 1.54 3.09 1.78 0.07 0.99 1.11 0.45 2.08 0.61 1.87 1.7 -1.38 - -1.04 -7.72 -2.69 -7.09 -6.2 -7.95 -9.59 -7.45 1.59 -1.03 -0.97 -1.96 -1.89 -0.8
-0.17 1.21 -2.35 - - -9.09 -2.17 0.9 0.37 0.13 -0.06 -0.66 - -1.53 0.62 -0.67 -0.04 1.44 0.58 0.17 1.05 0.69 2.43 -1.89 -3.56 0.46 2.28 1.29 0.32 - -0.28 -4.8 -0.88 -1.11 -4.74 -1.9 - -5.54 1.39 -3.48 -2.17 -2.91 -0.75 -1.02
-6.11 -9.49 - - - - -11.55 - -14.61 - - -8.89 - -6.47 -8.23 -10.27 -9.49 -2.69 -6.37 -1.41 -5.36 0.56 3.4 4.19 3.17 1.19 -1.95 -5.24 0.55 - -4.8 -7.23 -6.06 -8.47 -12.52 -12.71 -8.83 -7.63 -5.62 -8.49 -10.76 -11.69 -8.03 -8.85
-8.37 - - - - - - -8.73 - - - - - -1.89 -10.69 -7.41 -6.18 -2.73 -3.81 0.45 -1.42 2.51 3.29 2.7 3.67 1.56 -1.47 -4.71 -0.48 - 0.77 -7.9 -0.6 -8.85 - -11.81 -10.68 -8.16 -1.92 -8.53 -6.06 -3.16 -2.56 -6.17
AT5G43935 (FLS6)
- - - - - -4.2 -0.57 - -3.78 - - - - - - - -1.89 2.74 0.91 1.38 -2.56 1.18 0.32 -1.92 - - 2.36 -0.44 4.37 - -3.07 - -3.48 - -3.28 -2.14 -1.59 -4.0 - - -2.87 -2.45 -3.69 -
- - - - - - - -3.92 -4.99 -3.36 -4.97 - - -2.75 - - - -2.54 -1.74 2.31 2.34 1.08 4.0 -1.67 1.01 0.72 2.02 -2.02 0.57 - 0.17 -4.56 0.84 0.93 - -4.38 - - -3.36 - -3.62 - -2.28 -
- - - - - - - - - -9.85 -9.76 -1.37 - -6.56 - -6.46 -4.57 -1.93 -6.14 -1.26 -5.2 3.64 3.52 3.28 2.67 0.43 -2.28 -6.59 -0.85 - -6.4 - -8.23 -7.31 - -6.31 -7.05 -7.77 - -6.66 -6.02 -1.11 -2.17 -
AT5G58960 (GIL1)
-0.55 -2.66 -1.21 -0.01 -0.36 -0.37 -0.69 -0.45 -2.49 -3.01 -3.17 -4.42 - 0.15 -2.73 -0.02 0.17 0.26 0.57 3.37 0.66 1.76 0.3 -0.24 0.28 -2.25 0.59 0.68 0.43 - -0.98 -5.46 -1.03 -7.7 0.97 -1.18 -7.23 -6.6 0.13 -0.11 -0.08 -0.02 -0.05 -0.52
-0.75 -0.64 0.18 0.39 -5.05 0.1 -0.21 -0.56 0.03 0.2 0.07 -4.18 -2.8 -0.14 -0.16 -0.22 0.06 0.56 0.73 0.6 0.61 1.35 0.4 0.14 -0.39 -1.46 1.15 0.72 -0.15 -6.71 0.11 -1.64 0.09 -0.63 0.79 0.0 -2.32 -1.74 0.49 0.36 -0.33 0.8 0.18 -0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.