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View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Ovule | Ovule, mature | Ovule, pollinated | Strobilus, female | Ovulate strobilus | Microstrobilus | Kernel | Leaf | Leaf, female | Leaf, male | Leaf, salicylic acid | Leaf, seedling | Leaf, truncation control | Leaf, truncation treatment | Leaf, water | Yellow-green stripe leaves | Green leaves | Stem | Cambium | Root |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.18 | 1.03 | -0.32 | 0.61 | 0.77 | -2.15 | -3.47 | 0.36 | 0.37 | 0.18 | -0.23 | -0.09 | 0.4 | 0.21 | -0.16 | 0.58 | 0.77 | -2.01 | -3.85 | -3.31 | |
Gb_02309 (ROPGEF8) | -0.87 | -0.05 | -0.96 | -0.5 | -0.77 | 0.43 | -3.15 | 0.99 | 0.8 | 0.45 | -0.57 | -0.18 | 0.24 | 0.42 | -0.68 | 1.41 | 0.84 | -0.8 | -1.59 | -3.59 |
Gb_02578 (HA8) | 0.45 | -1.01 | -0.24 | 0.82 | 0.73 | -1.17 | -5.23 | 0.46 | 0.3 | 0.26 | 0.32 | -0.52 | 0.87 | 0.47 | 0.29 | 0.2 | -0.21 | -0.66 | -4.43 | -0.94 |
| 0.07 | -0.82 | -0.63 | 0.48 | 0.15 | -0.29 | -2.98 | 0.67 | 0.18 | 0.29 | 0.9 | -0.1 | -0.94 | -0.77 | 0.65 | 0.29 | 0.69 | 0.15 | -2.38 | -0.43 | |
| 0.07 | 0.04 | 0.58 | 0.97 | 0.3 | -1.04 | -1.6 | 0.11 | -0.02 | -0.37 | -0.11 | -0.12 | 0.3 | 0.19 | -0.14 | 0.66 | 0.74 | -0.52 | -1.55 | -2.64 | |
Gb_04956 (NLM2) | -1.43 | -1.39 | -1.17 | -0.65 | -0.15 | -1.92 | -9.17 | 0.63 | 0.63 | 0.91 | -1.2 | 0.69 | -0.2 | -0.4 | -1.69 | 1.41 | 1.74 | 0.07 | -8.02 | -0.04 |
Gb_05331 (FDH) | 0.55 | -0.45 | -0.42 | 0.6 | -0.17 | -0.57 | -0.18 | 0.1 | -0.23 | 0.12 | -1.14 | 0.21 | -0.35 | -0.73 | -0.91 | 1.32 | 1.68 | -0.22 | -9.96 | -6.74 |
| -0.06 | 1.22 | 0.64 | 0.36 | 0.2 | -1.11 | -0.95 | -0.08 | 0.01 | -0.5 | -0.11 | -0.77 | -0.25 | -0.19 | 0.07 | 1.03 | 0.5 | -0.4 | -1.94 | -1.66 | |
Gb_06093 (AAP3) | 0.22 | 0.94 | -0.06 | 0.79 | 1.6 | -3.85 | -9.2 | 0.33 | -0.09 | -1.0 | -3.99 | -0.41 | 1.17 | 1.5 | -4.28 | -2.75 | -1.03 | 0.77 | -3.23 | -5.14 |
| 0.27 | -0.21 | 0.05 | 0.69 | 0.49 | 0.13 | -1.66 | 0.11 | 0.24 | -0.13 | -0.15 | -0.61 | 0.51 | 0.5 | -0.32 | 0.57 | -0.19 | -0.33 | -1.12 | -1.05 | |
| -1.15 | -1.97 | -2.38 | 0.68 | -1.0 | -2.58 | -9.44 | -0.64 | -0.57 | -1.15 | 0.63 | 0.35 | -0.9 | -1.02 | 0.71 | 2.01 | 2.42 | -4.53 | -5.81 | -2.85 | |
Gb_06912 (CYP86B1) | -0.85 | -0.56 | -1.62 | 0.99 | 0.61 | -1.75 | -6.46 | 0.91 | -0.1 | 0.07 | -3.34 | -1.38 | -2.58 | -2.25 | -2.79 | 2.11 | 1.98 | 0.56 | - | -5.87 |
Gb_08311 (CYP94D2) | -0.47 | -2.87 | -0.89 | 0.36 | 0.53 | -0.74 | - | 0.36 | -2.06 | -2.23 | -7.75 | 0.26 | -7.54 | -7.61 | -7.96 | 1.95 | 2.79 | 0.59 | - | -6.43 |
| 0.32 | -0.48 | -0.71 | 1.13 | 0.99 | 0.81 | -4.21 | 0.81 | -0.41 | -0.2 | -0.25 | 0.52 | 0.29 | -0.5 | -1.04 | -0.2 | 0.72 | -0.25 | -7.71 | -6.05 | |
Gb_09524 (ALDH11A3) | 0.55 | -0.83 | -0.06 | 1.24 | 0.87 | -1.43 | -4.33 | 0.37 | 0.11 | 0.36 | -0.54 | 0.06 | 0.32 | 0.22 | -0.47 | -0.61 | 0.46 | 0.67 | -4.41 | -2.11 |
| 0.47 | -3.76 | -1.45 | 0.4 | 0.58 | -1.1 | -6.46 | 1.02 | 0.23 | 0.68 | 0.67 | -0.31 | -0.01 | -0.86 | 0.76 | -0.32 | 1.0 | 0.66 | -5.79 | -4.22 | |
| -1.53 | - | -2.53 | 0.66 | -0.87 | -3.32 | -5.67 | 2.04 | 2.23 | 1.94 | -2.75 | -1.44 | -0.08 | -0.96 | -3.09 | -1.91 | 0.3 | -0.93 | -4.86 | -1.28 | |
| 0.37 | 0.43 | 0.58 | 0.26 | 0.39 | -0.83 | -0.78 | -0.01 | -0.04 | -0.03 | 0.59 | -0.63 | -0.77 | -0.82 | 0.72 | 0.08 | 0.33 | -0.11 | -0.65 | -1.18 | |
Gb_10795 (ATZIP4) | 1.2 | -2.19 | 0.24 | 1.36 | 0.77 | -4.99 | -8.37 | 0.16 | 0.38 | -0.23 | 0.25 | 0.44 | -0.13 | -0.52 | -0.1 | 0.42 | 0.75 | -1.24 | -5.28 | -2.43 |
Gb_13204 (PDH-E1 ALPHA) | 0.24 | -0.33 | 0.34 | 1.04 | -0.14 | -0.88 | -0.5 | -0.08 | 0.22 | -0.12 | -0.05 | -0.52 | 0.12 | 0.19 | -0.15 | 0.72 | 0.39 | -0.46 | -0.87 | -1.04 |
Gb_13406 (DOGT1) | 0.25 | -2.98 | -0.7 | 0.29 | -0.52 | 0.81 | -0.78 | 0.48 | 0.26 | 0.38 | 0.26 | 0.23 | -0.56 | -0.34 | -0.35 | 1.12 | 1.32 | -2.35 | -6.2 | -1.32 |
Gb_13905 (CYP86B1) | -0.33 | 0.12 | -0.41 | 0.11 | 0.88 | -1.81 | -10.89 | 0.11 | 0.53 | 0.41 | -2.35 | -0.79 | -2.06 | -2.11 | -1.79 | 1.91 | 2.17 | -0.95 | - | - |
Gb_13906 (PGP2) | 0.08 | -0.61 | -0.72 | -0.02 | -0.17 | -0.7 | -2.24 | -0.23 | -0.23 | 0.17 | -0.29 | 0.12 | 1.28 | 0.6 | -0.31 | 1.08 | 1.34 | -0.23 | -7.09 | -7.36 |
Gb_13908 (PGP10) | 0.43 | 0.19 | -0.38 | 0.62 | -0.17 | 0.0 | -2.41 | 0.03 | 0.54 | 0.83 | 0.14 | -0.05 | -0.0 | -1.06 | -0.09 | 0.47 | 0.93 | -0.1 | -3.04 | -5.0 |
| -1.11 | -1.46 | -2.23 | 0.86 | 0.9 | -2.69 | -8.6 | 1.12 | 0.23 | 0.31 | -2.2 | -1.01 | -1.81 | -1.91 | -2.58 | 1.94 | 2.37 | -3.62 | - | - | |
Gb_14003 (CYP86B1) | -1.47 | -0.99 | -1.84 | 1.0 | 0.66 | -2.89 | -7.82 | 0.65 | 0.33 | 0.58 | -3.09 | -1.2 | -2.41 | -2.14 | -2.85 | 2.13 | 2.41 | -5.49 | - | -25.13 |
Gb_14318 (AHA10) | 0.75 | -0.08 | -0.15 | 0.75 | 0.93 | -0.72 | -4.5 | 0.3 | -0.07 | -0.26 | 0.07 | -0.18 | -0.69 | -0.83 | 0.27 | 0.59 | 0.48 | 0.05 | -0.86 | -1.28 |
| 0.34 | -4.3 | -0.64 | -0.25 | -0.08 | -0.39 | -6.74 | 0.97 | -0.19 | -0.42 | -1.08 | 0.74 | 0.6 | 1.43 | -1.32 | 0.5 | 1.09 | 0.44 | -3.61 | -2.53 | |
| -0.27 | -0.8 | -0.57 | 0.77 | 0.27 | -2.6 | - | 0.79 | 0.3 | 0.2 | -2.36 | 0.08 | -1.67 | -1.2 | -2.56 | 1.91 | 1.81 | -0.9 | -3.24 | -0.62 | |
Gb_18221 (TCP4) | 0.79 | 0.81 | 0.98 | 1.45 | 1.25 | -1.35 | -4.89 | 0.0 | -0.29 | -0.52 | -0.3 | -0.73 | -0.12 | 0.0 | -0.2 | 0.01 | 0.18 | -4.14 | -4.44 | -5.27 |
Gb_18403 (DSO) | 0.56 | 0.37 | -0.32 | 0.52 | 0.41 | -0.2 | -1.15 | 0.06 | -0.6 | -0.38 | -1.54 | 0.79 | -0.94 | -1.21 | -1.53 | 1.61 | 1.09 | 0.39 | -12.71 | -6.96 |
Gb_20040 (FAD8) | 0.65 | -0.2 | -0.11 | 0.68 | 0.21 | -0.21 | -2.14 | 0.62 | 0.1 | -0.33 | -0.28 | -0.27 | -0.42 | -0.36 | -0.53 | 0.69 | 0.62 | 0.25 | -0.44 | -1.25 |
Gb_20617 (AIR3) | -0.22 | 0.42 | 0.64 | 1.7 | 0.27 | -0.31 | -5.03 | 0.21 | 0.72 | 0.49 | -1.62 | -1.58 | -0.4 | -0.07 | -2.28 | 0.99 | 0.62 | -0.97 | -3.21 | -5.43 |
Gb_20638 (VTE1) | 0.35 | 0.99 | 0.76 | 0.98 | 0.69 | 0.18 | -3.2 | -0.22 | -0.67 | -1.12 | -0.49 | -0.65 | -0.36 | 0.13 | -0.75 | 1.21 | 0.34 | -0.92 | -2.44 | -2.6 |
Gb_21115 (PAL4) | -0.25 | -1.16 | -0.99 | 0.4 | 0.47 | -1.01 | -0.92 | 0.19 | -0.08 | 0.21 | -1.08 | 0.51 | -1.17 | -0.85 | -1.32 | 1.11 | 1.39 | 0.81 | -7.82 | 0.49 |
| -4.04 | -1.27 | -3.1 | -3.47 | -1.08 | 1.0 | - | 0.0 | -2.11 | -2.28 | -4.49 | -2.92 | -5.03 | -3.22 | -3.36 | 2.68 | 2.98 | -0.65 | -5.88 | -5.94 | |
| -0.13 | -0.42 | -0.4 | 0.87 | 0.39 | -0.16 | -1.03 | 0.34 | -0.28 | -0.48 | -0.02 | -0.03 | -1.03 | -0.99 | 0.25 | 0.46 | 0.35 | 1.0 | -0.03 | -1.07 | |
Gb_23487 (HPT1) | 0.82 | -0.17 | 0.76 | 1.3 | 0.31 | -0.83 | -1.8 | 0.27 | -0.04 | -0.22 | -0.69 | 0.15 | -0.93 | -0.73 | -0.64 | 1.2 | 0.63 | -1.06 | -2.54 | -3.88 |
| -2.62 | -1.73 | -1.9 | -4.07 | 0.56 | -0.71 | -5.61 | 0.52 | 0.74 | 1.54 | -2.34 | 0.6 | 0.35 | -0.13 | -2.51 | 1.55 | 1.54 | 0.23 | - | -7.71 | |
| -1.02 | -0.65 | -1.33 | -0.24 | -1.05 | -2.27 | -1.88 | -0.08 | 0.48 | -0.18 | -0.14 | -0.75 | -0.14 | 0.99 | -0.0 | 2.32 | 1.31 | -1.48 | -2.67 | -4.58 | |
Gb_24917 (SS2) | 0.56 | -0.34 | 0.1 | 0.86 | 0.48 | -0.06 | -1.74 | 0.38 | -0.23 | -0.39 | -0.06 | -0.61 | 0.45 | 0.21 | -0.03 | 0.39 | 0.16 | -0.13 | -0.91 | -1.74 |
| 0.19 | 0.21 | 0.12 | 0.55 | 0.98 | -0.19 | -0.43 | -0.11 | -0.12 | -0.08 | 0.52 | -0.77 | -0.69 | -0.96 | 0.47 | -0.13 | 0.26 | -0.41 | 0.05 | -1.51 | |
Gb_27864 (KCS9) | -4.71 | - | -9.26 | -5.02 | - | 0.73 | -5.7 | 0.29 | 0.04 | 0.65 | 0.08 | -2.1 | 0.79 | -0.06 | -0.33 | 2.11 | 2.31 | -3.53 | -8.17 | -1.86 |
Gb_28138 (DXR) | 0.41 | 0.07 | -0.23 | 0.56 | 0.13 | -0.21 | -1.98 | 0.2 | 0.12 | -0.24 | -0.09 | -0.46 | 0.74 | 0.61 | -0.05 | 0.26 | -0.34 | 0.36 | -1.3 | -1.01 |
Gb_29239 (SKIP4) | 0.38 | 0.79 | 0.75 | 0.63 | 0.45 | -0.83 | -1.21 | 0.11 | -0.34 | -0.27 | 0.41 | -0.36 | -0.66 | -0.94 | 0.21 | 0.3 | 0.32 | -0.02 | -1.07 | -1.63 |
| -0.6 | -2.95 | -1.58 | 1.24 | 0.27 | -4.91 | 0.68 | 1.11 | -0.57 | -2.08 | -3.18 | -0.69 | -4.42 | -1.98 | - | 2.33 | 1.99 | -2.93 | - | -1.17 | |
Gb_30276 (IRX3) | 1.2 | 0.04 | 1.15 | 0.76 | 1.53 | -0.29 | -1.8 | 0.06 | -0.19 | -0.26 | -0.24 | -0.95 | -1.28 | -1.9 | -0.29 | -0.06 | 0.89 | -2.24 | -4.39 | -3.86 |
| -2.38 | -2.88 | -3.97 | -1.76 | -0.43 | - | -2.51 | -0.29 | 0.12 | 0.03 | 0.64 | -0.75 | 0.09 | -0.99 | 1.23 | 2.05 | 2.38 | - | -4.59 | -5.34 | |
Gb_32132 (LACS4) | 0.09 | -0.47 | -0.69 | -0.41 | 0.54 | -0.01 | -0.88 | 0.9 | 0.16 | 0.32 | -1.8 | 0.38 | -0.98 | -0.47 | -2.09 | 1.09 | 1.34 | -1.4 | -0.5 | -0.27 |
Gb_32154 (YRE) | -2.11 | -3.63 | -3.03 | -0.57 | -1.1 | -0.76 | -12.37 | 0.8 | 0.38 | 0.98 | -1.43 | 1.14 | -0.63 | -1.09 | -1.73 | 1.58 | 1.89 | 1.08 | -14.0 | -7.07 |
| 0.64 | -2.63 | -0.25 | 1.42 | 0.14 | 0.11 | -6.46 | 0.92 | -0.6 | -1.23 | -1.2 | 0.06 | 0.31 | 0.79 | -1.1 | 0.4 | 1.11 | -0.26 | -2.7 | -2.26 | |
| 0.42 | -2.73 | 0.05 | 0.5 | 0.03 | -0.18 | -6.56 | 0.86 | -0.07 | -0.5 | -1.46 | 0.43 | 0.22 | 1.08 | -1.1 | 0.82 | 1.35 | -0.55 | -3.52 | -2.92 | |
| -0.27 | 1.28 | 0.94 | 0.78 | 0.3 | -0.36 | -1.85 | -0.05 | -0.43 | -0.76 | -0.33 | -0.73 | -0.15 | -0.33 | -0.56 | 0.8 | 0.48 | -0.37 | -0.95 | -1.71 | |
Gb_34744 (XBCP3) | 0.07 | -1.34 | -0.56 | 0.86 | 0.58 | -0.38 | -3.92 | 0.28 | 0.06 | 0.37 | 0.55 | -0.11 | -0.27 | -0.6 | 0.34 | 0.8 | 0.96 | -0.02 | -3.42 | -1.83 |
| 0.06 | -0.45 | -0.04 | 1.15 | 0.1 | -0.69 | -1.41 | -0.03 | 0.21 | -0.34 | -0.71 | -0.38 | -0.23 | -0.07 | -0.75 | 1.33 | 1.08 | -0.21 | -1.23 | -1.5 | |
| -5.14 | - | - | -2.04 | -0.19 | -0.73 | - | 1.13 | -0.23 | 1.24 | - | -1.34 | - | - | - | 0.82 | 2.99 | 1.46 | - | -6.0 | |
Gb_38743 (FAR5) | -4.52 | -6.28 | -3.98 | -1.8 | -1.74 | 0.02 | -9.88 | 1.37 | 0.29 | 0.05 | -1.25 | 0.84 | 0.08 | -0.0 | -1.28 | 1.75 | 1.92 | 0.71 | - | -6.28 |
Gb_39304 (RD22) | -0.25 | -1.7 | -1.6 | -0.4 | -1.47 | -0.75 | 0.23 | 0.11 | -0.08 | 0.33 | -1.74 | 0.83 | -0.07 | -0.07 | -1.41 | 1.68 | 2.1 | -1.08 | -15.99 | -7.17 |
| -0.71 | -0.67 | -3.11 | -2.45 | -2.58 | 0.64 | - | 0.8 | -0.59 | 0.66 | -4.28 | -0.52 | - | -6.62 | - | 2.25 | 2.56 | 0.42 | - | -5.52 | |
| -0.21 | 0.28 | -0.82 | -0.02 | 0.66 | -1.03 | - | 0.0 | 1.02 | 1.17 | -6.95 | -3.19 | -5.59 | -8.35 | -6.04 | 1.5 | 2.38 | -0.3 | -8.44 | -5.56 | |
Gb_39835 (GPAT6) | -0.92 | -3.29 | -1.9 | -0.4 | -0.73 | 0.05 | -9.73 | 1.3 | 0.76 | 1.16 | -9.06 | 0.48 | -2.97 | -2.0 | -8.24 | 0.8 | 2.08 | 1.33 | -6.17 | -4.3 |
| 0.6 | 0.68 | 0.74 | 0.55 | 0.83 | -1.0 | -2.81 | -0.07 | -0.51 | -0.03 | -0.93 | -0.2 | 0.35 | 0.49 | -0.92 | -0.75 | 0.43 | -0.06 | -4.57 | 0.19 | |
Gb_40569 (OMT1) | -7.37 | -7.34 | -6.06 | -3.99 | -1.31 | 0.22 | - | 1.47 | 0.96 | 1.28 | 0.58 | 0.92 | 1.32 | 0.54 | 0.41 | -1.89 | -1.97 | 1.0 | - | -7.25 |
Gb_40581 (THFS) | 0.37 | -0.49 | -0.38 | 0.7 | 0.27 | 0.36 | -0.92 | 0.27 | -0.04 | -0.33 | 0.19 | -0.46 | -0.27 | -0.21 | 0.08 | 0.3 | 0.24 | 0.38 | -0.64 | -0.63 |
| 0.08 | 0.84 | 0.7 | 0.08 | 0.2 | -0.35 | -1.55 | -0.09 | 0.16 | -0.06 | -0.17 | -0.15 | -1.23 | -0.86 | -0.31 | 1.27 | 0.74 | -0.34 | -1.27 | -1.69 | |
| 0.61 | 0.32 | 0.23 | 0.86 | -0.13 | -1.61 | -0.04 | 0.44 | -0.29 | 0.08 | -0.49 | 0.17 | -0.62 | -1.36 | -0.73 | 0.65 | 1.38 | -0.72 | -8.46 | -0.95 | |
| -4.95 | -2.39 | -2.76 | -5.15 | 1.62 | -0.48 | - | 0.39 | 0.15 | 0.36 | -4.02 | 0.28 | -3.11 | -1.47 | -4.53 | 1.62 | 2.62 | 0.14 | -8.07 | -6.63 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.