Heatmap: Cluster_71 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_02991	0.48	-1.15	-0.28	0.75	-0.47	-1.08	0.43	-0.28	0.1	0.21	-0.07	-0.33	0.24	0.28	0.75	-0.17	-0.26	-0.2	-0.78	0.07
Gb_03479	-0.91	-0.29	-0.34	-0.99	-0.26	-1.23	0.11	-0.06	0.13	0.58	0.77	-0.14	-0.2	-0.22	0.52	-0.05	-0.06	-0.05	0.54	0.42
Gb_03649	0.04	0.35	0.07	-1.07	0.36	-0.29	-0.29	-0.21	-0.22	-0.15	-0.35	0.04	-0.22	-0.26	-0.2	-0.2	-0.02	0.72	0.27	0.63
Gb_04743	-0.76	0.32	-0.45	-0.53	-0.19	-0.31	1.26	-0.01	0.19	0.09	0.11	-0.32	-0.62	-0.86	0.18	0.12	-0.7	-0.11	0.91	-0.42
Gb_04966	-0.51	-0.06	-0.54	-0.66	-0.05	-0.23	0.11	0.08	0.06	-0.04	0.65	-0.64	0.43	0.05	0.69	-0.03	-0.51	-0.54	0.62	-0.1
Gb_05644	-0.35	-0.3	0.07	-0.63	0.11	-0.15	0.42	-0.28	0.16	0.18	0.32	-0.94	0.03	0.18	0.06	0.37	0.2	0.3	-0.61	0.02
Gb_05748	-0.51	-0.14	0.01	-0.12	0.29	0.02	0.57	0.03	-0.21	-0.24	-0.4	0.59	0.36	0.46	-0.44	-0.87	0.05	-0.05	0.12	-0.47
Gb_06111	-0.8	-1.01	-3.74	-0.77	0.34	-0.73	0.16	-0.77	-0.48	-0.32	1.87	-1.09	-1.64	-0.9	2.19	-0.41	-1.02	0.76	-0.91	-2.63
Gb_06118 (HS)	-0.43	0.08	-2.79	-1.0	0.61	-0.24	0.21	-0.68	-0.16	0.03	1.37	-1.21	-0.45	-0.48	1.67	-0.39	-1.05	0.9	-0.98	-2.22
Gb_06174 (HSC70)	0.01	0.38	-0.37	-1.4	0.64	0.23	-0.2	-0.04	-0.51	-0.66	0.43	-0.64	-0.22	-0.43	0.72	-0.26	-0.11	0.6	-0.29	0.38
Gb_06251	-0.21	-0.84	-1.34	-	-0.37	-2.29	3.22	-1.97	-1.71	-1.06	-0.47	-1.74	-2.57	-1.61	-0.65	-1.3	-1.9	-1.25	0.49	1.15
Gb_06375	0.53	0.12	0.05	-0.43	0.15	-0.37	-0.51	-0.44	-0.34	-0.81	0.38	-1.02	-0.38	-0.41	0.36	0.4	0.73	0.61	-1.84	0.69
Gb_07293	-1.7	-0.41	-1.4	-1.05	-0.3	-1.83	1.36	-0.34	0.26	0.16	0.49	-0.44	-0.21	0.03	0.69	0.15	-0.94	-0.43	1.11	0.19
Gb_08410	0.89	-1.07	0.23	-	0.11	1.18	1.48	-0.15	-0.69	0.65	0.52	-1.12	-2.4	-1.63	0.43	-1.54	-	-0.06	-	1.14
Gb_08795	-1.03	0.09	-0.19	-0.19	0.21	1.29	0.08	0.05	-0.59	-0.45	-0.67	-0.5	0.4	0.51	-0.36	-0.65	-0.16	-0.08	0.42	-0.12
Gb_09258	-1.22	0.74	-0.67	-1.14	-0.4	-1.07	1.92	-0.77	0.28	0.4	-0.28	-0.42	-0.06	-0.16	-0.21	-0.82	-0.99	-0.4	-0.14	0.73
Gb_09903	-2.65	-0.28	-1.01	-2.56	0.01	-0.96	1.18	-0.26	0.63	0.82	0.0	0.43	0.23	0.1	-0.21	-1.29	-0.62	0.33	0.24	0.54
Gb_10081 (WIN1)	0.07	0.28	0.6	-0.1	-0.22	-0.61	0.01	-0.16	-0.19	-0.4	-0.2	0.12	0.31	0.38	-0.07	0.31	0.14	0.12	-0.58	-0.53
Gb_10565	-0.48	0.6	0.41	-0.45	0.11	-0.94	-0.4	-0.04	0.05	0.24	0.53	0.13	-0.2	-0.24	0.26	0.07	-0.33	-0.11	-0.32	0.17
Gb_11991	0.01	0.52	-0.65	-0.68	-0.5	-0.41	1.14	-0.5	0.32	0.1	-0.4	-1.68	0.02	-0.28	-0.16	0.53	-0.66	0.11	0.39	0.42
Gb_12129	0.06	-0.34	0.55	-	0.41	0.26	1.02	-0.05	0.18	-0.08	-1.23	-0.48	-0.42	0.2	-0.83	0.44	0.59	0.04	-1.07	0.16
Gb_12723 (MBD10)	0.52	-0.8	0.18	-1.67	0.49	0.14	1.32	-0.45	-0.14	-0.23	-0.16	-0.19	-0.89	-1.21	0.25	-0.14	-0.11	0.22	-0.57	0.53
Gb_13883	-0.37	-0.01	-0.34	-0.73	0.02	-0.12	-0.29	-0.43	0.15	0.33	0.49	-1.03	0.45	0.4	0.45	-0.29	-0.06	0.39	-0.54	0.31
Gb_13951	-0.69	0.19	-0.15	-0.99	0.04	-0.75	0.14	-0.04	0.26	0.34	-0.24	0.06	0.4	0.46	-0.11	-1.25	-0.63	0.38	0.07	0.81
Gb_14157 (EMB1144)	-2.35	-0.31	-1.38	-1.94	0.1	-0.11	-0.06	0.2	0.02	-0.13	0.59	-0.31	0.07	0.3	0.36	0.28	-1.73	0.91	-0.37	1.18
Gb_14423 (GC1)	-0.24	-0.2	-0.32	0.59	0.56	0.22	-0.42	0.04	-0.41	-0.75	0.38	-0.84	-0.15	-0.19	0.33	-0.46	-0.66	0.77	0.13	0.22
Gb_14539 (CCR2)	-1.38	-0.27	-0.69	-0.61	-0.06	-1.51	-0.64	0.05	0.01	0.18	0.8	0.34	0.42	0.27	0.9	-0.11	-0.19	-0.11	0.22	0.1
Gb_14665	-0.06	0.11	-0.01	-0.46	-0.02	-0.29	-0.53	-0.63	0.11	0.08	1.11	-0.81	0.48	0.03	1.17	-0.52	-0.46	-0.82	-0.06	-0.7
Gb_15310	0.07	0.91	0.12	-1.12	0.47	0.16	-0.12	-0.34	-0.46	-0.76	0.03	-0.69	-0.68	-0.66	0.23	-0.21	0.41	0.1	0.06	0.69
Gb_15685	-0.62	1.12	-0.08	-0.29	-1.61	0.13	1.21	-0.58	-0.04	0.01	-0.7	-0.06	-0.39	-0.36	-0.78	-0.15	-0.71	0.37	-0.42	0.83
Gb_16384	-0.25	-0.94	-0.55	-1.08	0.65	-1.52	0.47	-0.29	0.57	0.56	0.75	-0.1	-1.97	-1.94	1.0	0.14	0.08	0.6	-0.52	-0.16
Gb_16430	0.05	1.71	-0.18	-1.72	-0.41	-0.3	1.9	-1.04	-0.41	-0.16	-0.39	-1.05	-1.05	-0.82	-0.79	-0.4	-1.11	0.19	-1.51	0.55
Gb_16534	-0.55	0.79	-0.86	-2.57	0.59	-0.63	1.74	-0.92	-0.09	-0.13	-1.46	-0.19	-0.59	-1.46	-1.56	0.62	-1.16	0.08	1.21	0.06
Gb_18251	-0.34	0.02	-0.23	-0.37	-0.23	-0.13	0.58	-0.02	0.14	0.2	0.42	-0.26	0.15	0.13	0.38	-0.48	-0.25	-0.23	0.47	-0.73
Gb_18865	0.07	0.09	-0.05	0.54	0.71	0.01	-0.31	-0.21	-0.83	-0.3	0.12	-0.06	-0.71	-0.61	0.73	-0.0	-0.11	0.34	-0.37	-0.22
Gb_18897	-0.25	0.41	0.25	0.15	0.03	-0.48	0.39	-0.26	-0.24	-0.04	0.4	-0.04	-0.67	-0.78	0.53	-0.34	0.1	0.12	-0.39	0.24
Gb_19036	-0.88	-0.2	0.04	0.08	0.31	-0.03	-0.16	0.03	-0.36	-0.17	-0.41	0.37	0.63	0.27	-0.14	-0.81	-0.92	0.62	0.09	0.37
Gb_19404 (emb1303)	-1.25	0.15	-0.57	-0.59	-0.55	-0.32	0.22	0.06	0.14	0.2	0.35	-0.33	0.6	0.42	0.45	-0.36	-0.75	-0.46	0.96	-0.26
Gb_21129	-1.09	-0.71	-0.57	-1.18	0.01	0.48	1.07	0.23	-0.32	-0.28	-0.85	0.12	0.08	0.57	-0.79	-0.56	0.14	0.07	0.56	0.52
Gb_21419	-0.75	0.07	-0.51	-0.61	-0.51	-0.52	0.83	-0.15	0.31	0.31	0.36	-0.3	0.52	0.52	0.71	-0.08	-0.61	-0.4	-0.72	-0.22
Gb_21606	-0.48	-0.21	-0.1	-0.25	0.42	0.04	0.11	-0.02	-0.32	-0.27	-0.16	0.52	0.39	0.43	0.01	-0.77	-0.74	0.7	-0.46	0.08
Gb_21664	-1.26	-0.32	-1.09	-1.12	-0.44	-0.12	0.62	-0.25	0.2	0.29	0.46	-0.32	0.64	0.46	0.67	-0.08	-0.57	-0.31	0.45	-0.08
Gb_22003	0.03	-0.03	0.22	-0.46	0.66	0.01	0.73	-0.15	-1.02	-1.92	-0.25	-0.45	0.44	0.05	0.1	0.64	-1.02	0.51	-4.81	0.73
Gb_22069	-0.61	0.79	-0.24	-0.4	0.01	-0.47	1.06	-0.28	-0.3	-0.13	-0.29	-0.65	0.66	0.44	-0.09	-0.83	-0.96	0.03	-0.17	0.41
Gb_24977	-1.55	0.08	-0.67	-0.21	0.66	0.94	-0.01	0.04	-0.57	-0.4	-0.58	-0.33	0.82	0.57	-0.72	-1.13	-0.59	0.82	0.1	-0.19
Gb_25387	-0.22	0.04	-0.05	-0.38	0.61	0.39	-0.83	0.2	-0.61	-0.47	-0.12	-0.32	0.17	-0.03	0.04	-1.14	-0.2	0.39	-0.18	1.06
Gb_27002	-1.18	0.25	-0.89	-1.53	-3.14	0.21	2.73	-0.6	0.4	0.47	0.05	-0.75	-2.16	-1.68	-0.22	-1.21	-3.12	-3.42	0.88	-0.46
Gb_27936	0.7	-0.3	0.2	-1.3	0.26	-0.78	0.49	-0.26	0.33	0.32	-0.14	0.0	0.18	0.1	0.25	-0.18	-0.48	-0.01	-0.72	-0.04
Gb_28071	-0.12	0.24	0.5	-0.33	0.17	-0.16	1.28	-0.33	-0.2	-0.12	-0.1	-0.28	-0.57	-0.87	-0.01	-0.62	-0.23	0.14	0.24	-0.17
Gb_28415	-0.99	0.13	0.02	-0.06	-0.33	-1.5	0.76	0.21	0.08	-0.27	0.79	-0.42	0.6	0.43	0.69	-0.71	-0.21	-0.63	0.27	-2.05
Gb_29575	-1.03	0.37	-0.19	-1.31	-0.11	-0.17	1.33	-0.75	0.35	0.37	-1.08	-0.66	-0.38	-0.42	-0.9	0.28	-0.81	0.37	0.78	0.58
Gb_30789	-0.23	0.07	-0.54	-0.63	-0.01	0.5	0.19	-0.3	-0.17	0.05	0.14	-0.64	0.19	-0.01	0.36	-0.69	-0.52	0.24	0.02	0.85
Gb_30933	-0.64	0.03	-1.13	-0.58	-0.15	-1.34	0.71	-0.16	0.12	0.25	0.83	-1.03	0.7	0.38	0.77	-0.64	-0.84	-0.33	0.14	0.14
Gb_30984	0.27	0.48	1.07	-	1.12	-0.11	1.49	-0.16	-0.22	-1.95	-1.72	-0.42	-4.02	-2.52	-1.77	0.6	0.52	0.55	-0.76	-0.34
Gb_31194	-1.82	-0.16	-0.32	-2.62	-0.53	0.18	2.75	-1.71	-1.8	-2.63	-0.4	-1.99	-4.15	-2.71	0.07	-2.21	-2.36	0.36	0.87	1.46
Gb_32561	-0.22	-0.28	-0.25	-0.7	-0.21	-0.06	0.8	-0.02	0.28	0.2	0.18	-0.25	0.14	0.06	0.35	0.09	-0.08	-0.59	0.14	-0.35
Gb_32622	-0.81	0.92	-0.26	-1.46	0.19	-0.06	-0.59	-0.26	-0.65	-0.49	0.51	0.3	0.31	-0.17	0.78	-0.46	-1.12	0.31	-0.23	0.68
Gb_32918 (EMB1144)	-2.41	-2.99	-2.52	-1.45	0.58	-0.3	0.66	-0.13	0.38	0.2	0.23	-0.21	-0.57	-0.01	0.48	-0.34	-1.68	1.2	-0.36	1.38
Gb_32919 (EMB1144)	-4.04	-0.93	-2.27	-0.98	0.72	-0.01	0.57	-0.16	0.1	0.0	-0.22	-0.46	-0.36	0.04	0.06	-0.17	-0.85	0.97	0.83	1.0
Gb_32920 (EMB1144)	-2.33	-0.49	-2.73	-1.27	0.59	0.32	0.12	0.04	0.0	-0.3	0.45	-0.46	-0.61	-0.73	0.21	-0.4	-1.12	1.07	0.76	1.2
Gb_33154	-0.6	-0.66	-0.22	0.25	0.31	-1.86	-0.25	0.09	-0.16	-0.2	0.07	0.32	0.38	0.31	0.07	-0.68	-0.06	0.33	-0.03	0.82
Gb_33871 (NRPE9B)	-1.42	-0.04	-1.15	-	0.42	0.79	0.77	-1.74	0.24	0.74	0.95	-1.5	-0.25	-0.75	2.0	-	-	-	0.63	0.05
Gb_34131	-0.69	1.1	0.08	-0.72	0.26	-0.51	0.08	-0.42	-0.3	-0.27	-0.08	0.1	0.36	0.29	-0.08	-0.36	-0.16	0.0	-0.24	0.31
Gb_34437	-1.55	-2.47	-2.56	-1.3	-0.66	-1.66	0.85	0.39	0.32	0.59	0.47	0.32	0.59	0.23	0.72	-0.81	-0.15	-0.06	0.88	-0.24
Gb_34943	-0.27	-0.13	0.07	-0.6	0.35	-0.3	-0.43	0.07	-0.43	-0.39	0.24	-0.01	-0.02	-0.02	0.2	0.04	0.15	0.53	-0.06	0.4
Gb_35345 (GCN1)	-0.45	-1.11	-1.08	-0.93	-0.03	-1.36	0.61	-0.29	0.09	0.05	0.76	-0.42	0.66	0.42	0.82	0.79	-0.52	0.02	-0.64	-0.32
Gb_36387 (ATG8G)	-0.53	-2.39	-2.31	-1.66	-0.43	-0.99	1.17	-0.1	0.45	0.44	0.76	-0.33	0.33	-0.03	0.92	-0.29	-0.11	-0.5	0.51	-0.09
Gb_36445	-0.51	0.2	-0.2	-0.65	0.37	0.34	0.28	-0.02	-0.41	-0.26	0.44	0.32	-1.3	-1.42	0.32	-0.61	-0.05	0.56	-0.25	0.79
Gb_36633 (CCR2)	-0.43	-0.39	0.33	0.66	-0.14	-2.08	-0.69	-0.12	0.24	0.62	0.36	-0.41	-0.17	-0.33	0.28	0.57	0.28	-0.82	-0.04	0.1
Gb_37009	0.45	-0.46	0.19	-1.3	0.26	-0.13	-0.15	-0.33	-0.06	-0.68	0.45	-0.73	-0.19	-0.71	0.2	-0.24	0.16	0.87	-0.81	1.0
Gb_37685	-0.29	0.31	0.88	-3.4	0.49	-0.81	1.02	-0.37	-0.58	-0.9	-0.46	-0.66	-0.69	-0.21	-0.33	0.61	0.12	0.72	-1.4	0.8
Gb_39705 (NPQ7)	-0.53	0.21	0.23	0.01	-0.15	-0.71	-0.05	-0.03	0.23	0.16	0.36	-0.41	-0.23	-0.09	0.38	0.78	-0.13	-0.02	0.03	-1.13
Gb_40193	1.12	-0.12	1.26	-0.16	0.17	-1.64	0.21	-0.35	-0.23	-0.5	-0.7	-0.28	-0.23	-0.63	-0.17	-0.36	-0.08	0.23	-1.73	0.71
Gb_40225	0.14	-0.3	-0.25	-0.42	0.46	1.21	-0.4	0.4	-1.45	-0.94	-1.36	0.41	0.09	0.06	-1.13	-1.17	-1.54	1.58	0.1	-0.48
Gb_40226 (TET4)	0.13	-1.08	-0.74	-1.09	0.46	1.21	-0.38	0.2	-1.3	-0.79	-1.32	0.36	0.4	0.84	-1.49	-1.42	-1.09	1.57	-0.26	-0.04
Gb_41256	-0.45	0.55	0.07	-0.38	-0.23	0.22	0.02	-0.25	0.01	0.16	0.07	-0.47	0.57	0.48	0.2	-0.37	-0.83	-0.03	-0.33	0.11
Gb_41507	0.14	0.31	0.75	0.07	0.41	-0.86	-0.12	-0.29	-0.16	-0.53	0.11	-0.11	-0.18	-0.16	0.23	-0.46	-0.03	0.43	-0.16	-0.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.