Heatmap: Cluster_70 (HCCA)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-2.68 - -3.02 -1.05 3.35 3.17 - - - - - - - - - - - - - -
- - - - - 3.71 2.8 - - - - - - - - - - - - -
- - - - - 4.31 - -3.2 - - - - - - - - - - - -
-5.07 -1.51 -1.26 -1.34 -1.23 3.73 -3.14 -1.55 -2.28 -2.5 -2.28 -3.25 - -3.6 -2.31 -2.41 -0.38 -0.38 0.78 -2.09
Gb_01468 (AAE15)
-1.49 -1.06 -2.25 -2.28 -0.65 1.61 2.32 -3.05 -6.47 -4.31 -5.34 -1.92 -7.48 -7.7 -3.03 -2.52 -2.04 -1.53 1.77 2.4
-10.97 - - -4.22 -1.37 2.54 -1.11 -1.95 -5.4 -7.53 -6.28 -6.0 -4.58 -4.31 -3.52 -1.57 -2.79 2.82 -4.08 2.37
-2.97 -1.39 -2.55 - -2.3 3.93 -0.45 -2.44 -5.48 -4.44 - -1.01 -4.36 -4.21 - - -2.1 0.61 - -1.01
-2.1 0.62 -1.96 - -1.12 3.7 -1.14 -1.97 -2.21 -3.91 - -0.6 -4.27 -2.76 - -2.41 -0.88 0.15 - -0.25
1.04 0.59 1.08 0.3 0.71 0.28 -1.28 -0.55 -0.47 -0.87 -0.1 -1.15 -0.52 -0.49 -0.54 0.42 -0.3 0.26 -0.89 -0.99
-0.68 2.06 0.75 -0.53 0.62 1.67 0.42 -1.09 -0.82 -1.82 -1.92 -1.44 -2.08 -2.39 -1.86 -0.27 -1.31 0.2 0.21 -0.73
-0.39 1.77 1.13 -0.39 -0.26 1.58 0.67 -0.9 -0.88 -2.17 -1.17 -2.33 -1.56 -0.87 -0.3 -0.09 -1.47 -0.4 -0.04 -0.33
Gb_04454 (BGLU13)
0.11 -3.77 -2.58 -1.95 0.16 4.07 -3.36 -3.25 -4.28 -4.7 - -6.89 -6.27 -6.33 - -2.92 - - - -
-0.04 -0.19 -0.31 -0.17 0.18 1.17 -0.6 -0.4 0.04 0.27 0.16 -0.3 -0.32 -0.19 0.2 -0.01 -1.4 -0.14 0.3 0.21
Gb_04808 (JGL)
- - - - - 4.32 - - - - - - - - - - - - - -
1.85 1.05 1.8 1.69 0.73 0.34 -2.44 -1.16 -1.75 -2.05 -3.28 -3.35 -3.12 -2.48 -4.41 -0.73 -1.84 0.3 -1.42 -1.02
-0.56 -0.5 -0.23 0.04 0.73 0.96 0.81 -1.0 -2.31 -2.23 -1.42 -1.62 -3.01 -2.71 -1.28 -1.43 -0.75 1.55 1.12 1.59
Gb_06875 (NRT1.5)
-6.84 - - - -2.81 3.96 2.08 -9.91 - - - - - - - - - -8.02 - -8.11
0.73 0.13 0.35 0.6 0.51 -0.03 -0.16 -0.37 -1.34 -1.21 -0.62 -1.11 -2.65 -2.41 -0.87 -0.93 -0.49 0.92 0.79 1.43
0.16 -1.41 -0.03 -1.45 -0.48 2.86 0.51 -0.5 -0.86 -0.52 -2.6 -3.07 -1.56 -2.15 -1.71 -2.65 -0.51 0.07 0.56 0.32
Gb_09252 (NLM6)
-5.07 - -3.03 - 3.05 3.26 -0.37 -5.47 - - - - - - - - - -0.19 -4.55 -2.05
-4.9 - - - - 4.32 - -7.34 - - - - - - - - - - - -
-6.16 -4.63 -3.04 -5.21 -1.7 4.04 -2.29 -1.94 -2.35 -2.65 -3.42 -5.33 -4.62 -3.15 -2.42 -4.1 -1.23 -1.22 -3.11 -0.56
Gb_12800 (MES17)
- - - - - - - - - - - - - - - - - - - -
Gb_12947 (MC6)
-5.09 - -5.86 -0.59 -1.01 3.18 -7.32 -1.61 -2.24 -2.44 -2.44 -4.42 -3.55 -3.65 -0.85 -1.17 -0.42 -0.65 -4.63 2.63
Gb_14010 (LBD20)
-1.87 -3.75 -2.23 - -0.69 2.98 3.41 -7.14 - - - - - - - - - - - -1.6
Gb_14173 (GPAT6)
- - - - 3.57 0.46 2.75 - - - - - - - - - - - - -
1.38 0.34 1.02 1.42 1.09 0.87 -1.74 -0.81 -1.57 -1.84 -1.92 -1.37 -2.49 -2.32 -1.97 -0.72 -0.81 0.63 0.13 -0.2
-4.38 - -1.65 -4.28 4.01 1.79 -5.16 -11.01 - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
-1.29 -2.05 -2.0 -1.41 -0.28 1.47 -1.23 0.03 0.4 0.64 0.13 -1.17 0.38 -0.33 -0.09 -0.02 0.92 -1.34 -1.64 1.4
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
0.38 -1.26 0.49 -1.72 0.78 1.8 0.89 -1.17 -0.25 -0.64 -1.46 -1.33 -0.09 -0.3 -0.41 0.64 -1.34 -1.57 -1.79 0.8
-4.9 - - - - 4.32 - -7.34 - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
Gb_18798 (PLA-I{gamma}1)
-5.18 -5.35 -4.83 -1.35 -3.64 4.15 -0.36 -5.13 - -7.32 -6.55 -6.88 - - - -2.38 -1.43 -3.3 - -2.58
- - - - - - - - - - - - - - - - - - - -
-4.37 - -4.26 -1.7 -1.65 1.06 1.91 0.38 0.26 0.53 -0.55 0.5 -0.89 -0.77 -0.23 0.24 -0.21 -0.68 -4.95 1.44
Gb_20397 (ATSBT5.2)
-1.69 -6.52 -4.46 1.44 0.79 2.42 -1.09 -0.75 -1.37 -1.65 -0.25 -1.82 -1.57 -1.44 0.51 -0.09 -0.04 0.56 -1.71 0.18
- - - - 0.78 4.19 - - - - - - - - - - - - - -
Gb_20679 (FLS)
- - - -4.85 - 4.32 - -8.4 - - - -8.53 - -8.04 - - - - -7.04 -
- - - - - - - - - - - - - - - - - - - -
-2.94 -3.82 -2.82 -3.25 -2.8 4.03 0.79 -3.0 -3.02 -3.16 -3.77 -6.57 -5.98 -4.92 -2.12 -5.22 -2.75 -2.35 -2.85 -2.85
- - - -3.79 4.21 -2.97 0.38 - - - - - - - - - - - - -
- - - - - 3.72 0.81 - - - - - - - - - - - - 2.33
Gb_28054 (NPC2)
-0.58 -1.73 -2.84 -2.15 -4.59 4.08 0.45 -5.28 -7.88 -9.1 -8.27 -8.51 -7.46 -4.58 -5.65 -4.64 -7.75 -4.35 -8.19 -2.94
1.54 0.3 0.87 1.36 0.91 1.2 1.12 -0.16 -5.21 - - -4.69 -5.42 -6.56 -5.16 -2.91 -2.4 0.96 -0.77 0.28
1.36 0.02 1.22 1.61 1.4 0.51 0.95 -0.06 -6.59 -5.79 -5.15 -4.11 -5.39 -4.23 -5.28 -1.44 -2.37 1.1 -1.23 -0.44
- - - -5.57 -4.99 4.25 -0.25 -9.45 - - - - - - - - - -8.46 - -5.48
1.36 -1.16 0.68 0.66 0.25 0.98 -2.78 0.06 -0.21 -0.64 -0.24 -0.8 -0.84 -0.87 -0.61 -0.46 0.53 -0.13 0.38 -1.38
-2.87 - -3.75 - - 4.29 -4.52 - -4.6 - - - - - - - -3.41 - -4.32 -
Gb_29502 (NPC2)
-0.48 -0.19 1.09 -0.78 -1.32 3.65 -1.53 -1.75 -3.17 -3.77 -3.69 -5.62 -6.44 -4.44 -2.34 -3.31 -1.65 -1.35 -5.93 -0.38
0.69 0.47 1.48 1.28 1.31 2.31 -3.19 -1.63 -2.27 -2.41 -1.99 -1.8 -2.22 -1.64 -3.0 -1.79 -0.71 0.11 -5.89 -1.72
-4.01 - - - - 3.8 - 0.14 -0.86 -2.31 -2.69 -1.54 - -1.12 -0.48 - -1.9 -1.21 -3.6 0.74
1.41 0.53 1.2 1.31 0.5 -0.09 -1.56 -0.5 -0.61 -1.25 -1.36 -1.1 -1.02 -0.8 -1.16 -0.0 -0.29 0.03 -0.35 -0.65
Gb_31075 (MS2)
- - - - 3.93 2.23 -3.75 -7.15 - - - - - - - - - - - -
-3.08 -5.22 -3.38 -4.45 0.34 3.0 -0.48 -1.12 -1.23 -0.7 0.17 0.09 0.07 -0.19 -0.81 0.34 1.0 -4.16 -6.38 -2.41
-0.5 - -3.66 0.54 -0.41 2.2 - -0.48 0.01 0.31 2.36 0.6 -0.23 0.6 - -2.04 - - -2.36 -
Gb_31625 (SHT)
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - - - - - - - - - - - - -
- - -5.8 -1.56 -1.51 3.55 0.26 -0.98 -2.92 -2.71 -0.6 -3.66 -5.42 -5.19 0.5 -2.21 -1.74 -1.37 -4.31 1.29
- - - - - - - - - - - - - - - - - - - -
- - -3.29 - -2.31 3.84 -1.26 -6.3 - - - - - - -3.52 - - -3.48 1.18 1.33
1.06 - 2.4 2.48 0.18 1.04 - -1.57 - - -1.56 - - - - - - -0.14 -1.02 0.81
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - -
Gb_39343 (LBD20)
- - - -3.28 -4.89 3.77 2.38 -10.37 - - - - - - - - - -5.17 -0.0 -
Gb_40048 (ZF14)
2.7 -0.99 0.99 1.14 0.58 0.9 0.43 -8.39 - - - - - - - - - -2.32 -4.77 1.95
0.91 - -2.45 -0.74 0.39 1.4 1.29 -0.83 -0.14 -0.94 -0.48 -1.52 -0.88 -0.08 0.89 0.72 -0.95 -1.55 -1.13 0.67

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.