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Heatmap: Cluster_28 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
- - - - - - 1.11 0.15 0.04 - - - 1.39 - 1.51 2.43 1.85 - 0.32 -
- - - - 3.05 - - 0.73 - - - -0.81 - - - - - - - 3.24
- - - - - - - 1.12 - - 4.16 - - - - - - - - -
- - - - - - - 0.13 - - 4.24 - - - - - - - - -
- - - - - - - -0.58 - - - - - - - 4.27 - - - -
Gb_06184 (AML1)
 - -0.84 - - - - 1.25 0.78 0.06 -0.46 - -2.78 -2.34 - -1.21 2.7 2.16 -2.18 0.45 -2.09
-2.59 -0.43 -0.48 - 1.18 -2.39 -0.3 0.22 0.61 0.73 0.66 -0.09 -0.29 -0.72 1.49 0.81 -0.37 0.44 - -2.89
- - - - - - - 0.42 - - - - - 1.23 - - 3.23 - 2.8 -
-3.18 -0.27 -0.96 -3.54 -1.57 -0.86 -2.64 -0.18 -2.82 -1.76 2.77 -1.01 -0.33 -1.45 2.32 -0.68 -3.16 -1.64 -0.75 -0.01
- 1.99 - - - 1.07 -0.85 -1.92 -0.78 - - - -0.51 - - 3.29 - - 1.02 -
- - - - - - - 4.32 - - - - - - - - - - - -
Gb_11033 (PA200)
 -1.59 0.55 - - - - -0.79 0.84 1.33 0.92 0.63 -0.76 -0.32 1.67 0.8 -0.1 -1.11 1.12 - -
- - - - - - 4.02 1.5 -0.07 - - - - - - - - - - -
- - - - 2.82 - - -2.24 - - 3.65 - - - - - - - -2.61 -
- - - - - - - -0.73 - - 4.28 - - - - - - - - -
0.47 - - - - - - -0.42 - - 3.39 - 1.07 -0.07 - 2.13 - - - -
- - - - - - - 0.85 - - 4.19 - - - - - - - - -
- - - - - - - -0.07 - - 4.25 - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
-1.23 1.9 -0.12 - - - 0.62 0.08 1.02 0.94 1.69 0.46 - - - - - 1.56 -0.27 -
1.0 -0.19 0.08 - 0.04 -2.02 0.11 -0.31 0.74 1.31 0.42 -0.93 -0.9 -2.21 0.47 -0.2 0.17 -0.49 0.92 -2.61
-1.8 - -0.83 - -0.74 - - -1.34 1.44 1.96 0.73 -2.61 - - 1.31 2.33 0.87 - -1.31 -
- - - - - - 0.18 -0.63 0.44 0.29 3.3 - 1.7 - 0.85 - - - -0.44 -
- - - - - - - - - - 3.46 - - - - - - - - 3.17
- - - - - - - - - - 4.32 - - - - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - 3.56 - - 0.19 2.58 - - - 0.1 -
- - - - - - - -0.42 -2.71 -2.43 3.39 1.34 - 0.09 1.98 - - - -0.16 -
- - - - - - - 4.32 - - - - - - - - - - - -
Gb_18870 (NAD6)
 - - - - - - - -1.92 - - 4.3 - - - - - - - - -
- - - - - - - - - - - - - - - 4.32 - - - -
-3.18 -0.27 -0.96 -3.54 -1.57 -0.86 -2.64 -0.18 -2.82 -1.76 2.77 -1.01 -0.33 -1.45 2.32 -0.68 -3.16 -1.64 -0.75 -0.01
0.99 - 1.95 - - - - -2.02 0.26 - 2.91 - 2.37 - - - - - - -
- -0.65 -0.67 - - - -0.97 -0.41 0.88 -0.03 2.53 -1.45 -0.98 -0.89 1.83 -0.12 0.71 -1.86 -0.3 -1.9
- - - - - - - 0.77 - - 4.06 0.73 - - - - - - - -
-1.04 - -1.08 2.22 0.65 - - -1.18 -1.19 -1.81 1.71 - - -2.47 0.43 2.33 -0.58 -1.12 -1.61 -1.33
0.06 1.2 -0.81 - 0.13 - -0.02 0.58 0.69 0.79 1.57 0.69 -0.29 -2.42 -0.1 - - 0.58 -0.45 -1.26
- - 0.52 - - - 0.79 0.22 -16.22 0.98 - -0.18 0.35 0.08 - - -1.3 1.7 0.06 2.54
- - - - - - - 2.83 - - - - - - - - - - - 3.69
- - - - - - - -0.55 - - - - - - - 4.27 - - - -
Gb_22583 (VTC2)
 -0.42 - -0.07 - -1.07 1.85 0.24 0.1 0.84 0.94 1.18 -3.04 - -2.46 0.43 1.63 - -0.17 -1.51 -
Gb_24009 (SMC6A)
 - - - - - - - - 1.03 0.99 3.68 - - - 1.64 - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - 0.78 -2.51 -0.57 0.41 - 3.58 - - - - - - - 1.6 0.17
Gb_26272 (IMPA-9)
 -3.84 - - - 1.63 1.61 - -2.14 1.27 - 3.39 -0.62 - - - - - - - -
-1.34 - -0.97 1.74 -1.87 -1.63 -1.1 -1.12 -2.13 - 2.3 -1.92 1.29 -0.3 0.66 0.74 -0.47 -2.01 0.39 -
- - - - - - - 2.88 3.66 - - - - - - - - - - -
- - - - - - - -1.2 - - - - - - - 4.29 - - - -
1.19 - 1.11 - - - 1.93 1.13 0.22 - - - 1.42 0.61 0.89 - - - 1.24 -
- 0.07 -3.38 - 0.24 -1.21 -4.83 1.76 0.37 0.32 -1.63 0.83 2.29 1.97 -2.87 - - -5.28 - -2.34
- - - 2.86 - - - -0.8 - - 2.69 - - - 0.97 1.39 - - 0.19 -
- - - - - - 1.3 -0.7 1.67 2.11 0.91 -3.64 2.35 -1.04 0.76 - - - -2.46 -
- - - - - - - 0.52 - - 3.95 - 1.65 - - - - - - -
0.38 1.02 0.43 - 0.61 -1.26 -1.23 0.32 0.38 -0.27 1.87 -0.89 - - 1.21 -0.59 -1.14 0.23 -1.65 -1.13
- - - - - - - -3.55 - - 3.48 - - 1.31 - - - - 2.65 -
-1.03 - - - - 0.14 0.32 0.47 1.23 -0.87 0.84 -1.87 -1.4 -0.45 -0.25 2.22 - 1.4 -0.62 -0.15
- - - - - - - - - - - - - - - 4.32 - - - -
- 0.26 -0.9 0.81 0.79 - -0.06 -0.56 0.48 - 1.06 - 1.65 -2.4 -0.13 1.71 -0.79 0.5 -2.49 -
0.26 0.98 -0.62 - -0.67 - 1.52 -0.25 -0.06 -0.57 0.74 0.42 -3.11 -1.19 0.68 0.93 -1.65 0.13 -1.03 0.31
- - - - - 1.36 0.31 -0.7 - 0.31 2.72 - - - 2.95 - - - - -
Gb_35122 (ZIP7)
 - - - - - - - -0.82 - - 3.26 1.5 - 1.91 - - - - 1.7 -
- - - - - - - - - - 4.32 - - - - - - - - -
1.74 - - - - - - 1.01 - - 0.78 - - 0.02 2.92 2.12 - - - -
- - - - - - 1.56 1.18 1.65 2.63 - - - 0.02 1.33 - - - 0.97 -
- - - - - - - 1.46 - -0.14 3.36 0.68 - 0.21 0.52 0.89 - - - -
-0.06 - - 2.58 0.88 - -0.97 -0.75 - - 2.15 -2.07 - 0.07 1.35 0.58 - - -1.6 -
- - - - - - -0.89 -1.1 - - 3.76 - - - - - 2.44 - - -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - 4.32 - - - - - - - - -
-9.49 - -13.94 - 0.59 - 0.42 1.04 1.15 -1.27 2.06 0.35 0.1 1.14 1.22 -3.84 -3.27 -1.33 -0.84 -1.89
- - - - - - - - - - - - - - - 4.32 - - - -
Gb_40409 (IBR1)
 - - - - - - - -0.56 0.02 0.91 - - - - - 3.41 - 2.53 - -
- - - - - - 0.24 0.61 1.26 1.63 2.81 - - 0.43 - 1.14 - - 0.3 -
Gb_40567 (4CL2)
 - - - - - - - - - - 4.32 - - - - - - - - -
- - - - - - - - - - 4.32 - - - - - - - - -
0.38 - - - 0.37 - - -0.59 0.26 -1.45 2.92 - - - 2.18 1.24 -0.52 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.