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Heatmap: Cluster_143 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
30.27 17.12 24.15 34.41 20.63 11.9 10.46 17.15 11.74 12.4 13.75 9.81 16.38 15.21 13.11 10.45 12.2 12.95 12.84 8.96
Gb_03695 (FIP37)
 21.96 24.89 21.03 18.2 19.89 11.84 19.68 14.27 9.92 8.82 17.48 11.8 7.69 9.51 16.5 9.7 12.5 14.1 23.57 22.18
14.25 12.22 17.3 17.02 12.76 13.78 5.71 10.97 6.44 5.88 8.79 6.48 5.66 5.31 6.56 6.56 8.27 11.49 15.78 7.02
48.55 74.47 95.65 39.2 54.19 46.73 23.37 36.21 20.55 18.97 33.35 25.41 13.12 16.26 28.32 24.35 34.46 44.69 55.43 33.35
Gb_06510 (MSH6)
 4.88 4.74 4.96 3.11 3.07 2.46 0.71 2.21 0.92 0.78 1.8 1.19 1.41 1.17 2.07 1.09 1.38 3.32 1.69 1.88
7.68 3.98 4.77 5.99 6.22 2.48 4.49 4.61 3.82 3.34 6.72 2.77 2.69 2.45 6.05 4.31 2.73 5.18 4.69 4.87
Gb_07061 (EMB2753)
 11.7 10.39 12.19 10.45 10.82 5.38 8.03 8.67 8.39 6.15 7.61 4.21 10.83 7.05 8.03 6.82 4.43 6.99 7.98 8.16
Gb_07137 (NF-YB10)
 92.18 73.99 90.82 72.71 94.75 68.62 36.2 49.94 32.19 34.47 42.65 30.24 37.63 31.99 42.31 29.0 36.34 53.12 56.5 21.76
10.49 6.98 17.85 5.93 6.79 1.06 2.38 5.59 5.06 3.88 4.85 3.01 7.06 6.38 4.78 8.18 6.67 4.59 1.12 4.29
0.78 1.57 2.3 0.63 0.47 0.07 0.19 0.42 0.42 0.28 0.15 0.2 0.43 0.47 0.43 0.75 0.33 0.34 0.06 0.22
36.62 42.91 61.55 21.59 20.1 10.77 4.47 17.31 10.15 8.4 12.5 7.85 13.98 13.86 14.93 17.53 13.51 17.44 8.51 5.91
8.86 6.06 9.0 7.37 7.06 4.11 3.91 6.04 4.37 4.33 6.18 4.62 3.12 2.91 5.46 3.3 4.1 5.46 5.19 3.45
23.39 20.72 18.23 13.31 16.73 13.48 11.02 11.56 6.2 6.32 5.45 6.48 3.96 3.71 6.53 5.86 7.47 12.06 17.9 8.42
Gb_12074 (rps15ae)
 106.95 123.46 199.11 109.07 109.59 51.74 59.42 79.07 94.63 85.27 91.72 71.05 68.63 62.78 91.92 127.37 91.61 90.65 82.16 71.61
652.4 865.32 1005.6 417.7 332.97 116.81 103.43 287.64 240.84 208.08 315.0 258.58 223.44 224.75 276.21 461.12 387.73 238.19 131.64 147.74
4.71 3.21 10.85 0.0 2.71 0.0 0.0 1.31 0.57 0.82 0.0 0.77 0.24 0.1 0.0 0.47 1.12 1.31 2.53 0.0
Gb_17406 (NRP2)
 229.32 183.2 298.25 171.57 101.52 28.65 50.8 107.36 62.37 62.9 122.52 55.58 63.08 43.55 123.94 55.79 60.67 67.36 104.56 61.15
36.47 37.06 76.84 53.93 36.59 22.06 22.85 40.83 29.4 32.11 36.71 30.71 14.61 10.23 39.8 19.73 26.15 36.95 31.97 12.97
12.12 9.82 11.19 7.89 9.57 2.78 4.4 6.72 4.38 3.96 6.28 5.21 2.15 1.45 4.15 3.73 2.58 7.23 12.16 0.74
19.15 17.36 16.47 34.58 23.96 7.91 5.71 9.66 3.73 7.33 8.18 6.7 0.73 1.4 4.82 1.65 5.03 15.15 20.71 6.22
107.04 213.64 212.74 102.83 149.94 31.77 17.1 66.58 58.11 38.36 58.55 60.19 49.99 65.83 47.03 125.27 94.8 48.04 15.49 15.99
31.65 30.72 33.59 28.43 24.77 8.01 7.16 26.82 16.91 19.59 30.13 12.99 30.68 25.87 29.21 16.26 14.06 20.77 17.71 13.14
Gb_23519 (FRD4)
 27.79 26.28 35.51 27.04 18.22 7.94 5.29 13.49 9.93 8.94 13.86 7.12 10.28 12.26 11.09 27.62 16.93 7.74 7.59 3.53
162.49 49.04 92.69 65.82 72.87 32.01 41.65 57.1 31.62 33.69 49.6 32.85 45.75 32.64 43.3 23.76 50.37 41.15 51.64 29.78
6.81 10.17 8.68 3.39 6.44 3.06 5.89 4.65 3.04 2.85 6.75 3.8 1.6 1.68 5.71 3.4 3.59 7.61 9.05 3.56
12.07 9.84 9.2 7.24 9.0 7.72 8.62 7.3 5.23 5.18 7.2 5.61 4.93 4.08 6.69 4.72 6.13 9.97 9.4 6.23
10.5 13.98 13.11 11.29 9.12 7.58 8.69 8.07 5.58 6.07 9.68 6.86 6.14 5.86 8.93 5.59 5.86 7.16 12.31 7.04
167.31 81.21 155.15 191.03 152.19 79.21 70.26 169.92 139.88 146.7 193.41 120.9 174.76 170.05 195.0 140.43 159.98 148.19 117.16 80.09
44.43 73.52 126.47 27.27 33.49 27.21 26.14 19.75 14.13 10.34 25.47 17.5 13.03 12.07 27.47 35.07 19.32 27.04 17.72 17.45
245.72 229.6 244.89 222.37 194.74 50.71 74.96 174.27 132.29 125.93 185.21 139.84 196.91 184.74 174.72 146.14 111.41 117.97 162.41 85.74
0.46 0.62 1.03 0.54 0.64 0.23 0.25 0.23 0.19 0.21 0.22 0.15 0.16 0.08 0.3 0.03 0.11 0.57 0.79 0.0
44.58 56.96 61.6 35.13 36.91 22.11 36.69 31.76 21.92 21.92 22.31 25.0 16.64 16.69 24.86 18.45 34.74 32.07 49.72 20.43
27.64 10.65 20.7 22.87 21.83 11.76 8.01 19.18 12.56 10.72 21.84 11.36 16.25 16.09 21.36 20.03 21.34 18.56 14.93 7.01
10.36 6.36 16.53 10.79 7.43 0.53 3.18 3.64 4.83 4.58 8.75 2.88 1.03 0.83 8.88 6.65 4.77 4.27 4.88 4.11
3.67 4.44 3.91 2.26 3.94 1.68 2.1 4.24 2.31 2.22 3.23 1.96 2.59 1.77 2.98 1.52 1.38 3.93 5.9 0.63
6.1 1.19 3.98 2.31 4.58 1.17 1.9 2.3 1.17 0.97 2.42 0.82 0.48 0.35 1.69 1.57 1.74 2.79 2.36 2.65
22.02 15.53 21.73 22.01 16.46 8.7 11.16 14.39 10.23 8.87 12.6 8.64 7.4 5.96 13.45 6.33 9.41 9.04 14.96 7.19
29.17 26.13 27.82 38.92 17.24 3.4 6.01 15.48 14.61 12.31 20.85 10.74 7.03 8.54 19.41 37.55 18.19 16.03 8.73 3.07
15.56 23.4 27.29 13.18 10.99 2.73 4.75 5.56 4.49 3.46 7.65 2.42 0.55 0.5 11.03 8.36 3.76 6.99 16.25 4.23
Gb_37118 (GRP2)
 736.98 328.6 778.21 567.05 508.21 127.43 263.93 424.0 224.41 211.86 497.35 253.5 275.12 259.47 477.65 299.08 272.28 328.32 323.83 271.27
3.54 1.93 5.95 9.52 5.34 0.91 0.62 1.98 1.05 1.05 0.76 2.27 0.1 0.22 0.47 0.75 0.92 4.03 4.29 0.2
3.52 1.43 1.63 4.46 3.53 1.43 0.91 2.69 1.37 0.84 1.58 1.02 2.15 2.04 1.45 0.93 0.99 2.42 2.92 0.54
5.03 2.29 4.91 5.11 5.51 2.95 1.35 3.61 1.58 1.72 1.92 2.0 2.59 1.95 2.3 1.3 2.51 5.6 2.49 2.26
12.41 9.97 12.68 7.54 8.56 8.06 7.11 9.03 7.3 7.27 10.39 6.79 6.01 6.33 10.42 7.44 6.04 8.35 9.04 7.92
44.18 30.62 45.59 45.83 39.97 26.16 27.27 47.18 36.66 35.3 48.73 28.18 36.26 37.84 51.14 38.38 39.43 47.54 42.16 29.94

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)