Heatmap: Cluster_49 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Internodes of Aerial Stem	Leaf Sheath at Stem Node	Root
Ehy_g00648 (TIP1;3)	-0.3	-1.14	0.79
Ehy_g00733	-0.02	-0.37	0.31
Ehy_g00810	0.08	-0.59	0.36
Ehy_g01028 (PYD3)	0.04	-0.9	0.53
Ehy_g01113 (UPM1)	-0.06	-0.67	0.5
Ehy_g01122 (CNX2)	0.09	-0.65	0.38
Ehy_g01227 (RFNR1)	0.03	-0.51	0.35
Ehy_g01551	0.16	-1.25	0.55
Ehy_g01572 (URE)	-0.02	-1.36	0.7
Ehy_g01594	0.1	-0.47	0.27
Ehy_g01711	0.09	-1.96	0.74
Ehy_g01765	-0.04	-0.43	0.37
Ehy_g02108 (RGP1)	0.17	-1.06	0.48
Ehy_g02237	0.15	-1.24	0.55
Ehy_g02296	-0.16	-0.47	0.47
Ehy_g02489 (ADT6)	0.04	-1.29	0.65
Ehy_g02616 (AAT)	0.14	-0.81	0.41
Ehy_g02808 (CASP)	0.13	-0.6	0.31
Ehy_g02880	0.14	-0.82	0.41
Ehy_g02901 (HA11)	0.09	-0.63	0.36
Ehy_g03293 (MYB16)	-0.26	-0.56	0.57
Ehy_g03426 (CXIP4)	-0.17	-0.38	0.43
Ehy_g03583 (ATS9)	-0.02	-0.3	0.26
Ehy_g03610 (ELC)	0.03	-0.45	0.31
Ehy_g03654	0.04	-0.45	0.31
Ehy_g03792 (CNX1)	-0.11	-0.65	0.52
Ehy_g03805	-0.09	-1.22	0.7
Ehy_g03824 (PDI2)	0.05	-0.22	0.15
Ehy_g03831 (WRKY15)	-0.06	-1.01	0.63
Ehy_g03923	0.07	-0.4	0.26
Ehy_g03953	0.03	-0.43	0.31
Ehy_g03978	0.09	-0.67	0.38
Ehy_g04474 (AIP2)	0.13	-0.72	0.38
Ehy_g04541 (DESZ)	-0.11	-0.79	0.58
Ehy_g04712 (TMO6)	-0.01	-0.59	0.43
Ehy_g04729	0.17	-0.76	0.36
Ehy_g04757 (CHC1)	-0.17	-0.4	0.43
Ehy_g04826 (ERO1)	0.06	-0.4	0.26
Ehy_g04830 (PUM12)	0.08	-1.64	0.7
Ehy_g05085 (KJK)	-0.0	-0.89	0.55
Ehy_g05529	-0.04	-0.87	0.57
Ehy_g05652 (PK3)	-0.03	-0.58	0.43
Ehy_g05684	-0.06	-0.24	0.25
Ehy_g05794	0.0	-0.53	0.39
Ehy_g05847 (C4H)	0.13	-1.3	0.59
Ehy_g05885 (BEH4)	0.1	-1.03	0.52
Ehy_g05905 (CINV2)	-0.05	-1.82	0.81
Ehy_g05914 (HOG1)	0.09	-0.72	0.41
Ehy_g06041	-0.03	-0.94	0.58
Ehy_g06087	-0.09	-2.66	0.93
Ehy_g06181	0.18	-1.11	0.49
Ehy_g06187 (RAN1)	0.11	-0.65	0.36
Ehy_g06201	0.08	-0.63	0.37
Ehy_g06598 (WRKY28)	-0.18	-1.26	0.76
Ehy_g06714	-0.08	-0.79	0.56
Ehy_g06773	0.23	-2.67	0.74
Ehy_g06808	0.06	-0.46	0.3
Ehy_g06940	0.04	-0.81	0.49
Ehy_g06966 (KOR)	0.2	-6.03	0.87
Ehy_g06976	-0.01	-0.29	0.25
Ehy_g07007 (AR1)	-0.1	-0.43	0.4
Ehy_g07027 (EXO84B)	-0.05	-0.55	0.43
Ehy_g07112	-0.02	-0.65	0.46
Ehy_g07131	0.09	-0.58	0.34
Ehy_g07405	0.1	-0.75	0.42
Ehy_g07811	0.11	-0.59	0.33
Ehy_g07839 (EYE)	0.0	-0.54	0.39
Ehy_g07842 (BZIP17)	0.07	-0.82	0.47
Ehy_g07862	0.03	-0.49	0.34
Ehy_g07910 (PIP5K9)	0.02	-0.41	0.31
Ehy_g07922 (TPS6)	-0.12	-0.77	0.58
Ehy_g08270 (TIFY8)	-0.09	-0.62	0.49
Ehy_g08741	-0.46	-0.79	0.76
Ehy_g09057 (GONST4)	-0.25	-1.17	0.78
Ehy_g09158 (SPL2)	0.1	-0.81	0.44
Ehy_g09159 (CPK1)	-0.04	-0.49	0.4
Ehy_g09173	-0.18	-0.84	0.64
Ehy_g09188	0.08	-0.31	0.19
Ehy_g09292	-0.07	-0.68	0.51
Ehy_g09519	0.04	-1.3	0.65
Ehy_g09640 (bHLH121)	-0.19	-1.63	0.85
Ehy_g09728 (SVL5)	0.0	-4.49	0.97
Ehy_g09739	0.12	-1.16	0.55
Ehy_g09814 (SHI)	0.22	-3.05	0.78
Ehy_g09959 (SERK1)	0.0	-1.12	0.62
Ehy_g10008	0.03	-0.76	0.47
Ehy_g10316 (SZF2)	-0.25	-3.6	1.05
Ehy_g10635	-0.57	-0.98	0.87
Ehy_g10844	0.17	-1.79	0.67
Ehy_g11110	-0.05	-1.36	0.72
Ehy_g11624	-0.83	-4.76	1.26
Ehy_g12025	-0.33	-1.53	0.89
Ehy_g12149	-0.21	-2.04	0.92
Ehy_g12384	0.02	-0.64	0.43
Ehy_g12609	0.02	-1.75	0.76
Ehy_g12611	-0.0	-1.78	0.78
Ehy_g12790	0.07	-0.59	0.36
Ehy_g12794 (NINJA)	0.06	-1.69	0.72
Ehy_g12919	-0.1	-0.75	0.56
Ehy_g12953	-0.04	-1.14	0.65
Ehy_g13143 (emb1579)	-0.08	-0.53	0.45
Ehy_g13349	-0.04	-1.18	0.66
Ehy_g13701	0.09	-1.33	0.62
Ehy_g13704	-0.41	-3.15	1.09
Ehy_g13830	0.12	-0.75	0.4
Ehy_g15086	0.18	-2.04	0.7
Ehy_g15274	0.07	-1.07	0.56
Ehy_g15467	0.02	-2.41	0.84
Ehy_g15820	-0.25	-0.35	0.46
Ehy_g16108	0.22	-2.92	0.77
Ehy_g16134	-0.02	-0.89	0.56
Ehy_g16349 (BRCC36A)	0.05	-0.62	0.39
Ehy_g16495	0.05	-0.49	0.32
Ehy_g16576	-0.19	-2.04	0.91
Ehy_g16921	-0.16	-1.1	0.72
Ehy_g17142	-0.07	-0.41	0.37
Ehy_g17219	0.01	-1.81	0.77
Ehy_g17238	-0.14	-0.5	0.47
Ehy_g17253	-0.06	-0.18	0.21
Ehy_g17288	-0.11	-0.8	0.59
Ehy_g17494	0.36	-3.73	0.72
Ehy_g17820	0.02	-0.37	0.28
Ehy_g18142	-0.05	-0.2	0.22
Ehy_g18498	-0.6	-3.35	1.17
Ehy_g18526	-0.13	-0.29	0.34
Ehy_g18727 (CPK8)	-0.09	-2.94	0.95
Ehy_g18746	0.13	-1.27	0.57
Ehy_g18771	-0.46	-5.49	1.17
Ehy_g19042	0.06	-1.44	0.67
Ehy_g19323 (SPL3)	0.02	-2.21	0.83
Ehy_g19808	-0.21	-0.92	0.68
Ehy_g19836	0.02	-0.76	0.48
Ehy_g19957	-0.59	-5.77	1.21
Ehy_g20036	0.06	-3.0	0.88
Ehy_g20637	-0.1	-0.66	0.52
Ehy_g20839	-0.1	-0.57	0.48
Ehy_g20844	-0.4	-0.86	0.76
Ehy_g20943	-0.07	-1.07	0.65
Ehy_g20972 (PAH2)	-0.07	-0.82	0.57
Ehy_g21035	0.06	-0.62	0.39
Ehy_g21152	0.05	-0.44	0.3
Ehy_g21360 (GSTU20)	-0.18	-1.48	0.81
Ehy_g21780	-0.18	-0.63	0.55
Ehy_g21786 (UBP19)	0.03	-0.29	0.22
Ehy_g21801	0.01	-1.06	0.6
Ehy_g21897 (AO1)	0.27	-3.65	0.78
Ehy_g22058	-0.21	-0.82	0.65
Ehy_g22182	-0.43	-1.46	0.92
Ehy_g22394	-0.14	-0.35	0.39
Ehy_g23132	-0.15	-1.18	0.73
Ehy_g23399	0.04	-0.71	0.44
Ehy_g23517	-0.04	-0.79	0.54
Ehy_g24504	-0.28	-1.43	0.85
Ehy_g24702	-0.02	-1.23	0.67
Ehy_g24973	-0.22	-3.55	1.04
Ehy_g25215 (PAL1)	0.02	-3.33	0.92
Ehy_g25219	-0.12	-1.43	0.77
Ehy_g25750	0.07	-0.4	0.25
Ehy_g26007	0.01	-0.94	0.56
Ehy_g26143	-0.45	-3.02	1.1
Ehy_g26460 (UGT85A1)	-0.31	-1.14	0.8
Ehy_g26693 (RR1)	-0.09	-0.86	0.6
Ehy_g26828	-0.2	-	1.09
Ehy_g26904 (WRKY28)	-0.08	-2.88	0.94
Ehy_g27408	-0.02	-4.78	0.99
Ehy_g27444	-0.02	-0.25	0.24
Ehy_g28008	-0.13	-2.19	0.9
Ehy_g28058	-0.17	-	1.08
Ehy_g28310	-0.56	-1.91	1.04
Ehy_g28536	-0.18	-3.55	1.03
Ehy_g28610	-0.0	-0.73	0.48
Ehy_g28707 (DLS1)	-0.13	-0.64	0.53
Ehy_g29308 (HCT)	-0.06	-1.47	0.75
Ehy_g29379	0.07	-0.78	0.45
Ehy_g29516 (WRKY71)	0.25	-3.02	0.76
Ehy_g29604	-0.14	-2.32	0.92
Ehy_g29623	0.18	-0.87	0.4
Ehy_g30244	0.04	-0.46	0.31
Ehy_g30507	-0.08	-	1.04
Ehy_g30611	-0.18	-1.42	0.8
Ehy_g30820	0.11	-0.97	0.5
Ehy_g30943	-0.01	-0.7	0.48
Ehy_g30951	0.08	-0.99	0.53
Ehy_g30986	-0.21	-2.68	0.98
Ehy_g31245	-0.05	-2.1	0.85
Ehy_g31308	-0.24	-2.54	0.99
Ehy_g31580	0.35	-3.24	0.7
Ehy_g31592	-0.4	-	1.17

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.