Heatmap: Cluster_23 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Internodes of Aerial Stem
Leaf Sheath at Stem Node
Root
1.43 -1.73 -
1.16 -2.27 -0.85
1.2 -1.97 -1.16
Ehy_g00285 (LLG1)
1.51 -2.98 -5.86
1.58 - -5.87
1.57 - -4.88
1.12 -1.27 -1.27
Ehy_g00684 (FAH2)
1.21 -2.47 -0.98
1.21 -1.93 -1.25
1.46 -4.01 -2.35
1.25 -2.14 -1.32
Ehy_g01194 (HEXO3)
1.44 -4.18 -2.12
Ehy_g01287 (STP9)
1.54 -3.73 -6.14
Ehy_g01427 (LAC17)
1.18 -3.46 -0.65
1.27 -4.98 -0.84
1.58 - -
1.21 -1.29 -1.87
Ehy_g02392 (GA5)
1.19 -1.76 -1.27
Ehy_g02563 (MCA1)
1.46 -3.77 -2.58
1.4 -3.2 -1.97
1.03 -1.23 -0.9
1.43 -4.36 -2.01
1.35 -4.37 -1.34
Ehy_g03407 (LIP1)
1.56 -4.27 -
1.52 -3.12 -6.53
Ehy_g03678 (KCS11)
1.49 -4.45 -2.82
Ehy_g03846 (RAT4)
1.36 -4.02 -1.4
Ehy_g03850 (GH9C2)
1.17 -2.94 -0.69
1.58 - -
1.58 - -
1.53 -3.22 -
Ehy_g04572 (EXL2)
1.36 -2.32 -2.07
Ehy_g04690 (S1P)
1.51 -2.79 -
1.41 -2.47 -2.55
Ehy_g05061 (ERL1)
1.47 -3.19 -3.16
Ehy_g05299 (BRH1)
1.12 -1.15 -1.43
1.32 -2.31 -1.74
1.5 -3.94 -3.34
1.25 -1.03 -2.85
1.08 -1.83 -0.72
Ehy_g05726 (PAP2)
1.56 - -4.21
1.58 - -
1.14 -1.97 -0.9
1.11 -1.28 -1.22
1.53 -4.79 -3.67
Ehy_g06619 (XTR6)
1.56 -4.31 -
1.45 -3.6 -2.4
1.47 -2.94 -3.32
1.55 -5.1 -4.38
Ehy_g06856 (sks4)
1.08 -1.86 -0.71
1.53 -3.19 -
Ehy_g07278 (RCI1)
1.52 -3.23 -4.82
1.39 -2.61 -2.16
1.58 - -5.71
1.46 -3.29 -2.77
Ehy_g07801 (DSO)
1.5 -3.8 -3.3
Ehy_g07903 (THE1)
1.31 -4.31 -1.07
Ehy_g08038 (ATMS1)
1.2 -2.76 -0.85
1.54 -3.98 -4.94
Ehy_g08365 (IAA11)
1.31 -3.45 -1.2
1.31 -4.04 -1.12
1.56 -4.46 -
1.58 - -7.68
1.55 - -3.67
1.58 - -
Ehy_g09659 (TUB6)
1.35 -4.4 -1.32
Ehy_g09747 (GH9C2)
1.4 -4.11 -1.73
1.51 -3.91 -3.52
1.48 -3.24 -3.33
Ehy_g09868 (PME2)
1.38 -4.28 -1.52
1.23 -2.32 -1.13
Ehy_g10089 (PA2)
1.52 -5.87 -3.21
1.58 - -
1.5 - -2.49
1.57 -5.57 -
1.1 -1.17 -1.29
1.49 -2.94 -3.91
1.48 -2.41 -5.07
1.51 -4.88 -3.2
1.58 - -
1.3 -2.49 -1.47
1.56 -4.5 -5.91
Ehy_g11504 (MYB86)
1.36 -3.29 -1.61
1.58 - -
1.58 - -
1.58 - -
1.58 - -
Ehy_g12015 (JAR1)
1.5 -5.27 -2.73
1.48 -2.47 -5.54
1.13 -1.34 -1.24
1.26 -2.36 -1.31
1.53 -3.13 -
1.43 -1.73 -
Ehy_g12791 (COB)
1.42 -4.68 -1.82
1.47 -2.17 -
1.47 -3.7 -2.75
1.58 - -
1.02 -1.43 -0.74
1.53 -5.18 -3.55
Ehy_g13172 (OSM34)
1.55 -7.03 -3.78
1.53 -3.16 -
1.39 -2.79 -2.06
1.58 - -
1.56 -4.15 -
1.54 - -3.52
1.53 -5.75 -3.58
1.57 - -4.61
Ehy_g14536 (VAMP725)
1.51 -2.71 -
Ehy_g14626 (PPa1)
1.41 -5.11 -1.65
1.4 -4.06 -1.75
1.48 -6.4 -2.33
Ehy_g15043 (BZIP34)
1.35 -1.99 -2.35
Ehy_g15056 (LTP4)
1.58 -8.06 -
1.43 -2.63 -2.72
Ehy_g15146 (RLP30)
1.57 -8.45 -5.8
1.52 -2.93 -7.76
Ehy_g15286 (HTA10)
1.52 -2.97 -
1.51 -3.77 -3.68
0.93 -1.24 -0.56
1.54 - -3.6
Ehy_g16058 (EXP15)
1.54 -5.92 -3.75
1.28 -2.62 -1.28
1.55 -5.0 -4.85
1.58 - -
1.51 -3.6 -3.94
Ehy_g16401 (YRE)
1.53 -5.47 -3.64
1.53 -3.68 -4.68
Ehy_g16539 (HTA10)
1.55 -4.42 -5.3
1.52 -2.92 -
Ehy_g16670 (RIN4)
1.46 -2.91 -3.09
1.55 -3.77 -
Ehy_g16715 (KCS5)
1.58 -6.95 -7.36
1.26 -1.91 -1.58
Ehy_g17105 (CAT2)
1.47 -2.17 -
1.57 -5.04 -
Ehy_g17400 (CHAL)
1.46 -3.65 -2.54
1.03 -1.21 -0.93
Ehy_g17814 (SUM1)
1.55 -3.75 -
1.55 - -3.91
1.58 - -
Ehy_g18007 (PUB17)
1.52 -3.98 -3.69
1.29 -3.18 -1.18
Ehy_g18232 (DSO)
1.57 -5.25 -
1.56 -4.09 -
1.58 - -
1.56 -4.13 -
1.54 - -3.54
1.58 - -
1.57 -5.44 -
Ehy_g18638 (RAT4)
1.46 -5.19 -2.13
1.42 -1.96 -4.01
1.47 -2.18 -
Ehy_g19235 (RABA4D)
1.58 - -
1.5 -6.63 -2.56
0.97 -1.1 -0.81
Ehy_g19820 (MYB114)
1.46 -1.96 -
0.98 -0.65 -1.38
1.26 -1.51 -1.96
Ehy_g20886 (RD20)
0.86 -0.84 -0.67
1.33 -2.57 -1.68
1.58 -6.86 -8.23
Ehy_g22548 (EXP1)
1.56 -4.93 -5.3
1.58 -6.24 -
Ehy_g24014 (LP2)
1.58 -8.23 -7.4
0.94 -1.09 -0.72
1.43 -2.11 -3.63
1.45 -2.41 -3.57
1.34 -5.57 -1.17
1.36 -3.1 -1.65
1.37 -2.29 -2.22
1.58 - -
Ehy_g29112 (ATMS1)
1.17 -2.25 -0.88
1.39 -3.73 -1.72
Ehy_g30901 (HEL)
1.46 -8.16 -2.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.