Heatmap: Cluster_105 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots (apex), 7 DAG
Roots (differentation zone), 4 DAP
Roots (elongation zone), 4 DAP
Roots (meristematic zone), 4 DAP
Roots (stele cells), 7 DAS
Roots (tip)
Leaves (rosette), 21 DAG
Leaves (rosette), 29 DAG
Leaves (rosette), 35 DAG
Leaves (rosette), 42 DAG
Leaves (rosette), 57 DAG
Epidermis cells
Mature guard cells
Stems (internode)
Stems (internode), senescent
Meristem (M1-3), 7-9 DAG
Meristem (M4-6), 1-12 DAG
Meristem (M7-1), 13-16 DAG
Axis of the inflorescence
Pedicel
Flowers (receptacles)
Flowers (floral buds)
Flowers (sepals)
Flowers (petals)
Flowers (stamen filaments)
Flowers (anthers)
Flowers (carpels)
Flowers (ovules)
Stigmatic tissues
Pollen
Siliques
Siliques, senescent
Pods of Siliques
Pods of Siliques, senescent
Embryo
Endosperm
Seeds, dry
Seeds, from senescent siliques
Seeds, young
Seeds, germinating
Seedlings, 5 DAG
Seedlings, 11 DAG
Seedlings, 14 DAG
Seedlings, etiolated
-1.17 1.03 0.13 0.09 -4.9 -2.43 -1.51 -2.87 -2.39 -2.2 -3.32 -1.78 -3.26 -2.71 -2.15 -1.66 -1.6 -1.76 -2.18 -1.96 0.7 0.71 -0.95 -1.77 -1.6 0.66 1.02 1.76 4.35 -2.7 -1.91 -4.24 -2.3 -2.28 -1.42 -1.07 -5.34 -4.95 -0.03 -2.93 -1.76 -1.64 -1.68 -1.85
-5.73 -0.53 -4.49 - - - - - -7.59 -5.12 -6.16 - - - - -8.98 -11.02 -9.2 - -8.36 -1.34 -0.03 -3.84 -6.0 - -4.58 0.28 -2.25 5.3 - -6.55 -5.0 -8.31 -1.54 - -1.13 - -8.48 -4.61 -6.0 -5.65 -6.93 -6.51 -5.22
-2.88 - -8.57 -5.34 - -9.1 -8.23 -6.04 -13.02 - - -8.41 - 1.15 -10.99 -3.47 -3.85 -4.04 1.3 2.19 0.94 1.53 -3.04 -7.62 -6.29 -5.73 1.43 -1.64 4.52 - -0.3 -7.51 -1.53 -9.57 -4.7 -7.44 -11.56 -9.13 -0.7 -1.81 -2.54 -5.4 -3.2 -0.0
AT1G06520 (GPAT1)
-5.42 -3.58 -6.2 -7.15 - - -4.85 -2.58 -0.23 1.2 1.0 -6.79 - -5.02 -0.32 -3.36 -3.96 -5.44 - -7.73 0.79 -0.82 -1.67 0.58 -1.68 -1.32 0.7 1.39 4.31 - 0.55 -1.22 -0.02 0.94 0.78 -3.8 -3.89 -2.22 0.65 -4.09 -5.88 -5.62 -4.57 -4.43
-1.21 -1.06 -1.48 -0.24 -0.22 -1.07 -0.89 -2.21 -0.47 -0.24 -0.41 -5.16 -6.18 -0.01 -0.31 -0.91 -0.52 -0.35 -0.32 -0.79 -0.47 1.05 -0.84 1.0 1.34 -0.02 0.96 1.02 3.73 -1.75 -0.6 -2.05 -0.44 -0.84 -1.42 -3.08 -2.87 -2.2 -0.08 -1.19 -1.87 -1.13 -1.35 -1.6
AT1G16060 (ADAP)
0.71 0.84 0.27 1.0 - 0.96 -0.63 -3.79 -3.1 -3.26 -3.33 - -7.2 0.06 0.42 0.18 -0.65 -1.16 -0.49 -0.28 0.87 1.41 1.25 -0.04 0.11 1.23 -0.11 -0.83 3.22 -8.52 -1.24 -4.03 -1.95 -0.29 -1.82 -1.48 -8.06 -5.1 0.09 -0.7 -1.37 -0.65 -0.27 -1.25
AT1G19790 (SRS7)
-1.68 - - - - - - -6.71 -7.86 -7.72 - - - -7.6 - -0.09 0.13 1.42 -1.27 -2.3 1.17 -0.3 -4.01 -3.88 -2.37 -2.44 1.26 0.16 4.9 - -5.64 -6.26 -8.66 - -2.14 -4.65 - - -1.09 -2.94 -2.68 -4.04 -2.12 -2.92
-4.3 -1.72 -4.79 - - -5.74 -4.25 -4.79 -1.0 -0.61 -1.05 -3.83 -1.67 -0.16 0.99 -6.19 -5.87 -7.35 -3.34 -2.09 -2.93 -0.23 1.68 1.7 -1.81 -3.96 0.57 -3.78 4.58 - -0.08 0.44 -0.22 0.07 -4.21 -3.08 -3.48 -1.57 -4.97 -6.89 -5.84 -3.29 -6.3 -4.61
- - - - - - -1.72 -0.4 -0.83 -1.8 -2.49 -3.19 1.69 -8.85 - -4.6 -3.05 -2.35 - -4.63 -4.71 0.28 -0.05 -1.28 0.13 1.0 0.84 -6.06 4.87 - -6.64 -8.95 -6.91 - -8.7 -1.51 - - -9.71 -3.08 -0.98 -2.07 -3.37 -3.03
-10.31 - - - -6.23 - - - - - - - - - - -10.62 -8.66 -8.57 - -7.43 -5.22 0.87 -10.44 -8.93 -8.55 -7.03 1.79 2.77 4.91 - -8.13 -9.5 -9.15 -10.32 - - - - 0.88 - - - - -
-3.91 -0.83 -2.2 -2.1 - -3.3 -3.17 -4.98 -4.19 -4.55 -4.69 -5.95 - -3.81 -3.73 1.17 0.42 -1.59 -2.62 -2.62 -3.0 0.21 -3.39 -4.93 -4.87 0.26 1.21 2.36 4.6 -0.34 -3.83 -4.73 -3.91 -5.38 -1.88 -1.5 -4.69 -5.61 0.29 -3.63 -1.98 -2.78 -2.04 -3.9
- - - - - - -7.35 - - - - -6.18 - - - - -10.99 -9.17 - -7.09 -3.74 -0.06 - - - -7.45 1.2 3.49 4.77 -7.74 -6.36 - -8.94 - -7.74 -1.85 - - 0.88 - - - - -
-3.28 -5.35 -8.3 -7.65 - - -2.42 -4.61 -5.45 -6.19 -4.76 -6.46 - 0.66 -0.12 -0.16 0.43 0.23 0.67 -1.2 -0.9 -1.58 -3.41 -0.82 -0.96 -3.55 0.32 -2.8 4.88 - -3.45 -5.25 -3.26 -1.14 -4.48 -2.12 -6.7 -7.89 -4.09 -2.14 -1.21 -2.78 -1.2 -1.37
-1.78 1.18 -1.62 -7.88 - -7.25 - - -12.8 -12.84 -12.32 -8.76 - - -7.05 -9.87 -9.75 -6.82 - -5.59 1.84 0.33 -6.01 -6.26 -6.17 0.38 1.41 3.47 4.16 - -6.96 -8.01 -6.6 -10.72 -9.19 -11.65 -6.27 -10.41 1.48 -3.75 -4.72 -8.36 -4.02 -1.91
0.7 1.69 -2.96 -7.69 - -7.84 -2.78 -4.44 -2.29 -3.56 -3.46 - - -0.17 0.56 -1.02 -2.31 -2.24 -0.11 0.43 -0.71 -1.36 0.22 -4.24 -2.71 -1.42 1.05 -2.49 4.23 -10.95 0.07 0.12 0.11 -3.42 -8.1 -8.49 1.56 -0.09 -2.19 -3.03 -1.2 -6.22 -0.51 -1.03
-2.2 - -2.67 - - - - - - - - - - -4.85 - - - - -4.79 - - 1.13 -5.81 -4.91 -5.19 -3.56 0.11 -2.85 5.28 -0.71 -4.15 -5.07 - - - - - - -1.37 -3.29 - - - -
AT1G53130 (GRI)
-2.03 -4.03 -0.38 -4.85 - -2.37 - - - - - - - - - -11.77 -9.54 -9.49 - -7.42 -6.73 0.6 - - -10.67 -7.81 1.05 2.78 4.89 - -9.06 - -8.27 - - - - -10.23 1.3 -3.99 -5.97 - -4.9 -5.61
AT1G61560 (MLO6)
-3.4 1.14 -3.01 -5.96 - -4.97 -4.98 -4.02 0.8 1.39 1.22 -1.45 -0.63 -5.45 -1.84 -7.41 -8.19 -9.67 -8.68 -7.63 -3.26 0.14 -5.45 -8.27 -5.73 -8.23 -0.44 -3.44 4.93 - -7.01 -7.28 -8.75 -6.6 -7.96 -4.04 -7.37 -10.27 -5.45 -3.67 -4.17 -4.02 -2.13 -1.35
- - - - - - -3.81 - - - - - - - - - - - - -5.12 -3.33 1.24 -2.93 0.68 -1.27 0.95 0.35 0.41 5.1 -5.52 -8.02 -4.31 - -2.73 - - - - -2.38 -7.34 - -3.1 - -
-7.5 -8.9 -9.32 - - - -4.02 -10.73 -10.62 - - - - -0.36 -10.93 -7.95 -6.07 -5.93 -6.65 -0.7 -0.13 1.13 -0.07 0.59 0.05 -3.53 0.42 0.94 4.87 - 0.53 -7.79 0.39 -8.04 - - - -8.21 -1.54 -6.27 -8.09 -2.49 -3.69 -
AT1G70370 (PG2)
-1.19 -1.72 -1.32 -2.97 - -1.63 0.09 -4.04 -2.61 -2.97 -4.43 -3.06 -8.37 0.36 -3.7 -0.06 0.05 0.11 0.74 0.17 0.13 0.31 0.01 -1.33 -0.96 0.88 1.19 1.13 3.94 -6.13 -0.14 -5.74 -0.02 -2.65 -0.69 -1.62 -8.17 -7.01 0.08 -1.56 -0.37 -0.51 -0.04 -0.34
-5.81 -6.0 - - - - -2.39 -7.46 - - - -6.78 -1.89 -0.71 - -1.98 -1.79 -1.96 0.77 0.9 0.49 1.9 -0.42 -2.81 -2.21 -3.34 2.06 -1.92 4.67 -2.18 -1.04 -6.96 -1.3 - - - - -6.53 -2.39 -3.95 -2.79 -2.07 -1.37 -3.22
AT2G02850 (ARPN)
-4.24 -5.02 -6.0 - - - -7.22 -9.86 -11.44 -8.73 -11.27 -6.5 - -2.73 -6.29 -1.33 -2.73 -2.67 0.14 -0.95 1.12 -0.37 -4.88 -3.99 -1.3 -5.67 0.91 2.51 4.19 - -4.86 1.31 -6.89 -5.92 -3.28 -7.14 1.24 1.61 1.73 -1.24 -4.49 -4.17 -4.91 -3.32
- - - - - - - - - - - - - - - - -9.48 -9.75 - - - -0.11 - - - -6.52 0.37 -3.48 5.38 - -8.37 - - - - - - - -6.47 - - - - -
- - - - - - - - - - - - - - - - - - - - - 3.03 - - - 1.53 -0.06 - 5.0 - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - 2.05 - - - 1.44 -0.43 - 5.17 -1.15 - - - - - - - - - - - - - -
-5.92 - - - - - -6.75 -14.21 -15.07 -14.89 - - - -4.03 - -4.46 -4.12 -4.28 -7.65 -6.48 -7.95 -0.44 -8.84 -10.15 -9.55 -6.78 0.41 -5.36 5.34 -11.98 -8.22 -13.23 -8.73 -10.77 -11.4 -8.26 - -12.18 -9.18 -13.65 -4.83 -1.06 -0.57 -10.2
1.63 2.87 2.33 - - -0.7 -3.87 -7.02 -6.6 - -6.6 - - - -2.26 0.4 -0.56 -3.14 - - -6.16 -1.11 - - -5.43 0.21 -1.21 - 4.36 - -4.29 - - - - -4.38 - - -0.48 -0.03 -3.23 -1.37 -1.04 -2.29
3.45 0.15 -5.44 - - - - -0.38 -8.82 -5.21 -7.7 - -2.41 0.46 -2.12 0.48 -0.4 -3.55 - -7.33 0.28 -1.95 -8.05 -2.52 - -4.82 -0.55 -6.9 4.53 - -2.35 - -2.63 - -5.73 -1.48 -3.9 -5.97 -3.61 -3.89 -2.9 -1.81 -2.39 -2.95
- - - - - - - - - - - -3.44 - -4.65 -6.13 -6.26 -5.98 -3.87 - -6.68 -7.68 -0.18 - -6.42 - -5.63 0.25 -4.23 5.37 -6.16 -7.72 - -7.26 - -6.07 -3.26 -4.71 - - - -7.03 - - -
AT3G02940 (MYB107)
-3.88 0.5 -5.1 -6.98 - -8.44 -8.0 -8.42 -7.27 -4.33 -5.66 - - - - -5.35 -10.02 -8.3 - -8.0 -5.06 -0.64 - - - -5.19 0.18 0.31 4.83 - -4.23 -2.0 -3.95 1.54 - 2.63 - -5.16 -2.21 -2.54 -3.99 -5.56 -1.76 -0.92
-0.75 - - - - - - - - - -4.89 - - - -7.64 -8.83 -8.94 -7.47 - -5.99 - -0.32 -8.69 -7.86 -7.58 -6.43 0.46 -0.26 5.33 - -7.65 - -6.57 - - -9.75 - -9.39 -2.78 - - -6.74 - -7.53
-11.9 - - - - - - - - - - - - - - -14.1 -10.45 -10.88 - -6.83 - 0.73 -9.85 -12.06 -9.83 -9.93 0.07 -5.96 5.37 - -9.13 - -9.28 -12.15 - - - -10.63 -12.04 - - - - -
AT3G24225 (ESR19)
-5.06 - - - - - - - - - - - - - -6.3 0.89 1.27 0.17 -2.68 -4.83 -6.59 -0.2 -6.09 -4.63 - -6.78 1.67 2.18 4.65 - -1.23 -6.23 -3.54 - 1.77 -6.15 - - -3.06 -3.92 -2.51 -5.15 -3.93 -1.89
- - - -0.23 - -0.62 - - - - - -0.58 - - - - -0.9 - -0.8 - - - - - - - -0.5 0.2 5.21 - - - - - - -0.26 - - -0.66 - - - - -1.63
0.19 -3.75 -4.69 -4.04 - -1.28 -3.02 -5.05 -4.56 -4.72 -4.29 - -1.58 -3.29 - -3.65 -6.78 -5.22 -2.43 0.3 -1.56 1.49 1.61 1.14 -1.76 0.14 0.14 -0.25 4.57 - -0.3 -2.54 0.4 -4.64 - -0.49 -2.34 -2.62 -1.97 -2.09 -3.47 -3.31 -2.55 -1.97
- - - - - - - -7.36 - - - - - - - - - -7.97 - - - -1.06 - - - - 1.38 0.35 5.3 - - - - - - - -5.14 - -5.36 - -3.3 - -4.93 -
-1.3 -0.51 -0.63 -5.13 - -3.4 -1.44 -3.44 -1.63 -3.93 -2.71 - - -0.17 - -1.28 -1.35 -0.77 -5.7 -5.68 -4.3 -0.5 -3.01 -5.77 - -7.52 2.7 -2.89 4.72 - -2.88 - -3.43 - - - - -6.36 -2.34 -5.33 -0.86 -0.39 0.23 0.91
-0.13 0.72 -4.48 -6.12 - -5.94 -7.14 -7.18 -8.35 -9.38 -8.35 - -7.3 -4.23 -4.62 -5.82 -5.55 -6.94 - -5.89 -6.09 0.41 -7.18 -6.21 - -5.29 0.18 -5.38 5.18 - -7.45 - -7.73 -7.84 -3.72 -4.82 - - -6.56 -4.95 -1.43 -6.7 -0.6 0.24
0.82 0.87 2.96 -4.3 - 0.52 - -6.8 -9.91 - -12.37 -6.66 - -9.7 -11.62 -2.88 -5.46 -8.67 -10.11 -7.52 -11.03 -1.04 -10.44 -8.69 -8.23 -8.31 -0.55 -4.83 4.8 - -10.03 -9.94 -9.14 -4.74 - -11.19 - -11.38 -7.69 -2.37 -2.54 -4.54 -3.04 0.36
- - - - - - - - - - - - - - - - - - - -7.26 - -2.21 -10.18 - -8.59 -7.75 -0.23 -6.01 5.41 - -9.45 -8.33 -9.68 - - - -1.61 - - - - - - -
- - - - - - -6.61 -5.27 0.25 -1.49 -0.61 - - - - - -10.26 -8.49 - -7.6 - 0.57 -5.66 - - - 1.22 2.37 4.98 - -11.31 - -9.25 - - - - - 0.12 - - - - -
AT4G25850 (ORP4B)
-2.67 -8.34 - - - - -3.67 - - - - - - -0.36 - -3.6 -3.54 -2.87 0.81 1.4 0.59 1.78 2.09 1.28 -2.98 -1.25 1.57 -1.06 4.25 - 0.37 -7.43 0.31 -6.61 -2.54 -3.27 -9.68 -6.66 -0.75 -4.26 -5.21 -6.64 -3.71 -5.28
AT4G39480 (CYP96A9)
- - - - - - -10.79 -5.42 -6.24 -6.14 -4.75 - - -2.59 -5.97 -8.42 -7.36 -1.71 -1.89 -0.88 -1.14 2.19 0.99 2.63 1.29 -0.32 0.92 0.39 4.41 - -1.89 - -2.22 -10.24 - -5.65 - -9.94 -0.31 -2.97 -4.05 -6.54 -4.32 -2.89
AT4G39490 (CYP96A10)
- - - - - - - -7.67 - - - - - - - - -8.06 -7.89 - -1.36 -0.75 0.6 -6.75 -0.82 -1.18 -3.48 1.02 3.28 4.13 -3.88 -1.92 - -5.3 -5.51 - 1.54 - - 2.97 -7.76 - - - -
- - -4.16 - - - -2.53 - - - - - - - - - - - - - - 0.71 -2.41 - - - 3.0 - 5.05 - -2.63 - -4.01 - - -2.71 - - -4.98 - - -1.44 - -
-2.16 -2.4 -1.79 -0.72 -1.22 -1.64 -1.84 -1.84 -1.92 -3.02 -3.2 -2.23 -7.68 -1.25 -2.67 -2.94 -2.49 -1.51 -0.53 -0.62 -1.11 0.81 -1.19 -2.09 -2.68 -2.93 0.67 -0.58 4.84 -6.36 -1.38 -4.76 -1.26 -4.65 -1.16 -1.48 -6.55 -4.9 -0.99 -1.6 -2.27 -0.9 -1.07 -1.88
- - - - - - - - - - - - - - - -6.02 -5.82 -6.53 -8.23 -6.37 -6.68 0.84 -9.25 - - -10.1 0.32 -3.12 5.35 - -9.91 - -10.3 - -8.13 -4.88 -7.17 - -4.56 - - - -8.54 -
-7.43 -0.77 -5.94 -8.94 - - -9.02 -11.2 - -5.83 -3.9 - - - -2.75 - -9.28 -9.51 - -6.43 -7.8 0.3 -4.69 -7.05 - -6.18 0.5 -6.19 5.33 -9.35 -5.29 - -6.58 -5.04 - -6.92 - - -7.26 -7.97 -8.79 -8.52 -6.07 -3.64
-3.75 -6.87 - -1.88 3.16 -3.28 - -2.33 -7.8 -6.8 -5.5 -1.01 - -6.15 -7.9 -0.29 -1.29 -4.33 - -6.72 -3.47 -1.5 - -2.27 -5.49 -1.07 0.02 -0.74 4.84 - -3.9 -6.96 -4.96 -2.62 -3.58 -1.55 - - -1.23 -5.74 -5.61 - -4.09 -5.42
AT5G22980 (scpl47)
- - - - - - - - - - - - - - - - -9.54 - - -7.18 -3.31 -0.16 - - - -8.29 0.09 -1.22 5.07 - -0.86 - -3.03 - -6.29 2.68 - - -0.32 - - - - -12.08
- -8.8 - - - - - - - - - - - - - - -9.18 -10.4 - -5.42 2.67 -0.48 0.61 -2.85 -4.4 -7.59 -0.48 -5.42 5.1 - -7.23 - -8.14 -9.82 - - - -10.33 -7.55 - - - -9.92 -
AT5G35917 (CYP79A3P)
- - - - - - - - - - - - - - - - -9.1 - - - - -0.27 - - - -6.69 0.18 -3.68 5.39 - -11.15 - - - - -4.7 - -6.56 - -6.39 -6.8 - - -6.85
AT5G36110 (CYP716A1)
-5.18 -4.38 - - - - - - - -7.69 - - - -7.26 -7.42 -6.87 -9.83 -6.79 - - -6.49 -0.06 -6.09 -3.41 -2.59 -5.64 1.04 2.06 5.01 - -5.22 -4.39 -5.87 -6.17 -4.78 -3.76 -4.56 -6.23 0.13 1.2 -3.56 -6.27 -2.87 -2.24
-6.86 -2.96 -7.1 - - - -9.42 -8.38 -6.98 -5.61 -6.69 - - - - 1.77 0.76 -1.73 -3.69 -4.93 -2.85 -0.15 -7.44 -5.54 -4.59 -1.96 -0.03 -0.06 5.09 - -4.01 -7.47 -3.58 -2.6 -5.64 - - - -2.72 - -5.29 -3.89 -2.22 -4.01
1.91 3.16 0.29 -4.0 - -4.42 -3.49 -6.27 -6.51 -4.56 - - - 0.96 -1.82 -4.21 -4.35 -6.22 - -2.83 -0.39 1.56 0.09 0.65 -0.81 -2.64 0.42 1.79 3.3 - 0.07 - 0.2 -3.21 -5.42 -2.26 - - -0.41 -0.47 -2.71 -3.59 -0.0 -1.22
AT5G59810 (SBT5.4)
- - - - - -10.06 - - - -8.67 -9.98 - - - - - -11.27 -11.47 - -7.0 -1.25 -0.83 -10.17 - - 1.24 0.59 -0.93 5.06 -5.88 -1.97 - -4.11 - -6.43 2.17 - - -1.35 -10.01 - - - -9.21

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.