Heatmap: Cluster_25 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Internodes of Aerial Stem	Leaf Sheath at Stem Node	Root
Ehy_g00163	-1.36	-1.66	1.2
Ehy_g01367	-1.01	-1.48	1.1
Ehy_g01405	-0.5	-0.72	0.75
Ehy_g01684	-0.42	-0.47	0.61
Ehy_g02639	-0.4	-0.31	0.52
Ehy_g02739	-0.69	-0.35	0.67
Ehy_g03174 (EMB1793)	-0.48	-0.54	0.68
Ehy_g03553	-1.08	-1.12	1.05
Ehy_g04396 (TAF11b)	-0.52	-0.29	0.57
Ehy_g04494 (TET1)	-1.25	-0.85	1.02
Ehy_g04969 (CHB3)	-0.4	-0.32	0.52
Ehy_g05817 (MYB77)	-1.27	-2.06	1.23
Ehy_g05903	-0.5	-0.75	0.76
Ehy_g06049	-0.63	-0.54	0.74
Ehy_g06671	-0.41	-0.29	0.52
Ehy_g06896 (BIN5)	-0.16	-0.25	0.34
Ehy_g07103	-0.62	-0.74	0.8
Ehy_g08181	-1.04	-1.87	1.16
Ehy_g08332	-0.59	-0.61	0.75
Ehy_g08613 (GT2)	-0.56	-0.76	0.79
Ehy_g08918 (UBQ11)	-2.17	-1.21	1.23
Ehy_g09331	-1.62	-2.5	1.32
Ehy_g09374	-3.85	-2.7	1.47
Ehy_g09427	-2.22	-	1.48
Ehy_g09896	-0.82	-0.67	0.85
Ehy_g10044	-1.49	-1.78	1.23
Ehy_g10554	-1.96	-2.34	1.35
Ehy_g10626	-2.39	-	1.49
Ehy_g11183	-1.38	-	1.39
Ehy_g11454 (ERF-1)	-2.73	-3.58	1.47
Ehy_g11833 (HRE2)	-1.61	-	1.42
Ehy_g11879	-2.35	-4.24	1.46
Ehy_g12115 (ERF12)	-1.01	-1.58	1.12
Ehy_g12307	-0.63	-0.58	0.75
Ehy_g12423	-0.83	-0.92	0.93
Ehy_g12887 (HVT1)	-0.6	-0.45	0.68
Ehy_g12904 (MYBR1)	-2.15	-4.17	1.44
Ehy_g13409	-3.29	-2.13	1.42
Ehy_g13516	-0.66	-0.99	0.9
Ehy_g14498	-2.76	-5.84	1.5
Ehy_g14866	-0.37	-0.28	0.48
Ehy_g15026 (EXO70D3)	-1.77	-3.52	1.39
Ehy_g15072	-2.32	-2.46	1.39
Ehy_g15214 (ZF2)	-1.03	-1.3	1.07
Ehy_g16343	-0.38	-0.46	0.59
Ehy_g17408	-1.04	-1.53	1.12
Ehy_g17535	-2.02	-4.98	1.44
Ehy_g18326 (CPK14)	-1.32	-1.98	1.23
Ehy_g18475 (PAL1)	-1.39	-4.62	1.37
Ehy_g18919	-2.48	-3.35	1.44
Ehy_g19055 (SD2-5)	-1.5	-4.02	1.37
Ehy_g19444	-1.94	-3.19	1.39
Ehy_g19837	-0.57	-0.43	0.66
Ehy_g21110 (SWA3)	-0.38	-0.44	0.58
Ehy_g22481	-4.86	-3.52	1.53
Ehy_g23280	-3.4	-2.32	1.44
Ehy_g23315 (AHL1)	-0.8	-0.62	0.83
Ehy_g23499	-0.56	-0.71	0.77
Ehy_g23663 (HSL2)	-0.91	-1.08	1.0
Ehy_g24709 (UBQ11)	-1.58	-0.92	1.09
Ehy_g24826 (LRL3)	-1.45	-0.64	0.99
Ehy_g25467	-1.31	-2.0	1.23
Ehy_g25923	-	-	1.58
Ehy_g25948	-	-	1.58
Ehy_g25973 (ARL)	-2.6	-7.79	1.5
Ehy_g25991	-	-	1.58
Ehy_g26003	-1.92	-4.14	1.42
Ehy_g26041	-	-	1.58
Ehy_g26126	-2.35	-4.93	1.47
Ehy_g26132	-0.7	-0.46	0.73
Ehy_g26175	-1.54	-	1.41
Ehy_g26236	-1.08	-2.81	1.25
Ehy_g26341	-2.98	-4.86	1.51
Ehy_g26374 (IXR1)	-3.94	-4.59	1.53
Ehy_g26383 (IXR1)	-3.47	-4.96	1.53
Ehy_g26409	-0.62	-0.79	0.82
Ehy_g26462	-	-	1.58
Ehy_g26498	-	-	1.58
Ehy_g26517 (ACR3)	-4.09	-4.17	1.53
Ehy_g26518	-2.52	-2.98	1.43
Ehy_g26540 (BSL3)	-0.35	-0.3	0.49
Ehy_g26845 (MAPKKK13)	-2.25	-2.9	1.41
Ehy_g26892	-3.61	-5.49	1.53
Ehy_g26895	-0.34	-0.33	0.5
Ehy_g26925	-0.51	-0.39	0.62
Ehy_g27046 (UBQ11)	-2.77	-5.54	1.5
Ehy_g27052	-3.04	-	1.53
Ehy_g27092 (NRT2.4)	-3.5	-	1.54
Ehy_g27094	-1.64	-2.26	1.31
Ehy_g27264	-	-	1.58
Ehy_g27325	-3.12	-3.83	1.49
Ehy_g27351	-5.63	-4.9	1.56
Ehy_g27542	-	-	1.58
Ehy_g27560	-	-	1.58
Ehy_g27582	-	-	1.58
Ehy_g27588	-	-	1.58
Ehy_g27616	-	-	1.58
Ehy_g27623 (ELF5A-3)	-	-	1.58
Ehy_g27696	-	-	1.58
Ehy_g27744	-	-	1.58
Ehy_g27769	-	-	1.58
Ehy_g27819	-3.04	-2.75	1.45
Ehy_g27867	-	-	1.58
Ehy_g27889	-3.34	-2.4	1.44
Ehy_g27901	-	-	1.58
Ehy_g27922	-	-	1.58
Ehy_g27968 (ATL4H)	-2.93	-4.87	1.5
Ehy_g28152	-	-3.56	1.54
Ehy_g28158	-	-2.77	1.51
Ehy_g28215	-3.81	-	1.55
Ehy_g28244	-	-	1.58
Ehy_g28250	-2.73	-2.51	1.42
Ehy_g28260	-	-	1.58
Ehy_g28288 (UGT84A1)	-	-2.39	1.49
Ehy_g28414	-2.24	-2.27	1.37
Ehy_g28510 (UBQ11)	-3.2	-4.88	1.51
Ehy_g28553	-1.7	-1.28	1.19
Ehy_g28760 (GRF12)	-	-	1.58
Ehy_g28767 (VAMP725)	-	-	1.58
Ehy_g28821 (ARFA1F)	-3.93	-4.98	1.54
Ehy_g28833	-	-	1.58
Ehy_g28875	-4.32	-3.91	1.53
Ehy_g28880	-1.84	-3.96	1.41
Ehy_g28916	-	-	1.58
Ehy_g28934	-1.91	-3.35	1.4
Ehy_g29025	-1.66	-3.3	1.37
Ehy_g29152	-	-	1.58
Ehy_g29156	-	-	1.58
Ehy_g29163	-2.17	-	1.47
Ehy_g29223 (UBQ11)	-2.11	-	1.47
Ehy_g29251	-	-4.26	1.56
Ehy_g29321 (AAc1)	-	-	1.58
Ehy_g29404 (bZIP43)	-2.55	-5.13	1.49
Ehy_g29407 (SD2-5)	-1.62	-4.01	1.39
Ehy_g29449 (CML43)	-3.41	-3.32	1.49
Ehy_g29466	-	-	1.58
Ehy_g29485	-	-	1.58
Ehy_g29620	-1.89	-2.66	1.36
Ehy_g29801 (GPX6)	-	-	1.58
Ehy_g29802	-6.26	-4.48	1.56
Ehy_g29810	-	-4.71	1.57
Ehy_g29816	-	-	1.58
Ehy_g29837	-2.74	-2.4	1.41
Ehy_g29855	-	-	1.58
Ehy_g29893 (ACT11)	-3.43	-	1.54
Ehy_g30030	-1.41	-2.49	1.29
Ehy_g30067	-1.11	-1.73	1.16
Ehy_g30217	-	-	1.58
Ehy_g30353 (XBCP3)	-	-	1.58
Ehy_g30519	-	-	1.58
Ehy_g30532	-	-	1.58
Ehy_g30552	-	-6.2	1.58
Ehy_g30572	-	-	1.58
Ehy_g30604 (ACT11)	-4.2	-	1.56
Ehy_g30615	-2.62	-3.78	1.47
Ehy_g30687	-	-	1.58
Ehy_g30776 (TLP1)	-3.4	-	1.54
Ehy_g30817	-	-	1.58
Ehy_g30889	-	-	1.58
Ehy_g30923 (DREB26)	-2.18	-2.7	1.39
Ehy_g30988	-	-	1.58
Ehy_g31019	-4.58	-	1.56
Ehy_g31052	-	-	1.58
Ehy_g31192	-3.07	-	1.53
Ehy_g31233 (BST1)	-2.04	-3.04	1.4
Ehy_g31301	-	-	1.58
Ehy_g31311	-	-	1.58
Ehy_g31349	-3.71	-	1.55
Ehy_g31352	-2.44	-7.98	1.49
Ehy_g31443	-	-	1.58
Ehy_g31464	-	-	1.58
Ehy_g31526	-3.27	-7.96	1.53
Ehy_g31583	-	-	1.58
Ehy_g31587	-1.12	-	1.34
Ehy_g31625	-	-	1.58
Ehy_g31764	-	-	1.58
Ehy_g31869 (SD2-5)	-1.38	-3.35	1.33
Ehy_g31965	-	-	1.58
Ehy_g32031	-	-	1.58
Ehy_g32130	-3.97	-3.18	1.5
Ehy_g32208	-	-	1.58
Ehy_g32282	-	-	1.58
Ehy_g32334 (PCFS4)	-0.6	-0.52	0.72
Ehy_g32348	-2.2	-2.23	1.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.