Heatmap: Cluster_18 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Leaf, Brachetto, 3 month old plants
Leaf, Pinot noir
Stem, Cabernet Sauvignon, N. parvum-infected, 3h
Stem, Cabernet Sauvignon, N. parvum-infected 24h
Stem, Cabernet Sauvignon, N. parvum-infected 6 weeks
Shoot apex, Chasselas Blanc,Preanthesis G stage
Shoot apex, Chasselas cioutat,Preanthesis G stage
Shoot phloems, Merlot
Flower bud, Female, Stage B
Flower bud, Female, Stage D
Flower bud, Female, Stage G
Flower bud, Female, Stage H
Flower bud, Hermaphrodite, Stage B
Flower bud, Hermaphrodite, Stage D
Flower bud, Hermaphrodite, Stage G
Flower bud, Hermaphrodite, Stage H
Flower bud, Male, Stage B
Flower bud, Male, Stage D
Berry, mid-ripening
Berry, post-fruit set
Berry, post-harvest withering
Berry, Zinfandel, veraison
Berry, Zinfandel, post-veraison
Berry, Zinfandel, harvest
Grape Skin, Cabernet Sauvignon, 20 Brix
Grape Skin, Cabernet Sauvignon, 22 Brix
Grape Skin, Cabernet Sauvignon, 24 Brix
Grape Skin, Cabernet Sauvignon, 26 Brix
Grape Skin, Chardonnay, 20 Brix
Grape Skin, Chardonnay, 22 Brix
Grape Skin, Chardonnay, 24 Brix
Grape Skin, Chardonnay, 26 Brix
Grape Skin, Merlot, 20 Brix
Grape Skin, Merlot, 22 Brix
Grape Skin, Merlot, 24 Brix
Grape Skin, Merlot, 26 Brix
Grape Skin, Pinot Noir, 20 Brix
Grape Skin, Pinot Noir, 22 Brix
Grape Skin, Pinot Noir, 24 Brix
Grape Skin, Pinot Noir, 26 Brix
Grape Skin, Sauvignon Blanc, 20 Brix
Grape Skin, Sauvignon Blanc, 22 Brix
Grape Skin, Sauvignon Blanc, 24 Brix
Grape Skin, Sauvignon Blanc, 26 Brix
Pericarp, Barbera, pea-sized berry
Pericarp, Barbera, berries beginning to touch
Pericarp, Barbera, soft berries
Pericarp, Barbera, Ripe for harvest
Pericarp, Negroamaro, pea-sized berry
Pericarp, Negroamaro, berries beginning to touch
Pericarp, Negroamaro, soft berries
Pericarp, Negroamaro, Ripe for harvest
Pericarp, Primitivo, pea-sized berry
Pericarp, Primitivo, berries beginning to touch
Pericarp, Primitivo, soft berries
Pericarp, Primitivo, Ripe for harvest
Pericarp, Refosco, pea-sized berry
Pericarp, Refosco, berries beginning to touch
Pericarp, Refosco, soft berries
Pericarp, Refosco, Ripe for harvest
Pericarp, Sangiovese, pea-sized berry
Pericarp, Sangiovese, berries beginning to touch
Pericarp, Sangiovese, soft berries
Pericarp, Sangiovese, Ripe for harvest
Seed, green berry stage
Seed, 1 week after flowering
Seed, seeded grape
Seed, seedless grape
Seed, 7 weeks after flowering
Seed trace, green berry stage
- - - - - 0.86 0.5 1.42 - 4.18 3.97 2.77 - 0.85 - - 4.07 0.49 - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.32 - - - - - - - - - - - - - - - -0.93 - - -1.28 - -0.45 - -1.35 -0.13
- - - - - 1.81 1.78 - - 3.33 2.84 3.07 2.36 - 2.89 2.73 3.82 - - 0.18 - - 1.57 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - 4.99 5.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -3.23 -0.21 -2.21 -1.86 1.01 -0.25 -0.12 2.54 1.48 1.85 2.04 2.06 1.74 2.81 2.62 2.25 2.19 -0.83 2.1 -0.19 -2.19 -0.46 0.28 -0.96 -4.12 -1.85 -2.32 -1.47 -1.27 -0.79 -1.27 -1.85 -1.38 -0.85 -1.56 -3.99 -1.75 -0.71 -0.99 -0.68 -1.67 -0.73 0.46 -3.68 -4.09 -3.09 -3.04 -4.28 - - -3.14 -2.92 - - -4.42 -3.54 -2.21 - - -2.32 -3.57 -1.68 -3.55 - -3.77 - - - -3.6
-5.18 - -1.58 0.86 1.74 - -3.91 -3.57 1.84 1.35 2.52 2.27 1.75 1.67 2.01 2.33 2.21 1.9 -0.12 1.74 -2.87 -2.1 -1.32 0.62 -2.03 -3.61 -2.27 -2.32 -0.22 -0.83 0.27 -0.81 -0.16 0.13 0.07 -1.58 0.39 -0.3 0.68 -0.91 0.66 0.32 -0.47 0.4 - - - - -2.46 - -1.96 - - - - - - - - - - - - - -3.46 -4.72 - - -3.12 -
-3.47 - - -1.68 -2.29 0.84 0.22 0.32 1.43 3.18 3.53 1.85 1.14 0.05 0.74 0.58 3.25 2.97 - - - - - - -2.88 - -4.05 - - - - - - - - -3.58 - - - - -4.77 - - -4.46 - -2.17 - - -2.61 -4.32 - - -3.4 -2.02 - - -2.97 -4.36 - - -2.84 -2.5 - - -0.7 -0.9 2.24 0.77 2.15 -0.18
-9.89 -8.23 0.66 1.83 1.01 -5.1 -5.25 -6.43 2.08 1.94 1.6 1.93 2.38 1.99 1.83 1.64 2.12 1.54 1.09 1.42 1.05 0.27 0.01 0.03 -0.41 -0.95 -0.66 -0.65 -0.82 -0.7 -0.5 -0.64 -0.62 -0.47 -0.8 -0.64 -0.33 -0.36 -0.35 -0.23 -0.51 -0.62 -0.37 -0.04 -5.43 -5.31 -4.82 -5.4 -4.42 -6.56 -5.65 -5.82 -4.26 -6.35 -5.66 -6.3 -5.31 -5.34 -6.22 -8.51 -3.93 -6.18 -4.77 -6.65 -7.94 -4.72 -4.46 -3.87 -5.12 -8.5
- - - - - - - - 1.83 3.02 2.05 - 2.6 -0.5 2.1 2.95 2.9 1.75 -0.11 2.98 1.69 - - - - - -3.61 - - -2.9 - - - - - - -0.05 0.65 0.74 0.48 0.53 0.47 0.35 0.81 - - - - - - - - - - - - -1.74 - - -2.39 -2.43 -2.27 - - - - - - - -
-2.45 -1.45 1.45 1.49 1.39 -0.81 -0.45 0.25 2.06 1.88 1.88 1.69 1.93 1.77 1.98 1.29 1.29 1.66 -0.4 0.96 -1.15 -0.36 -0.57 -1.2 0.08 0.01 -0.05 0.06 -0.73 -0.55 -0.66 -0.57 -0.63 -1.27 -0.64 -1.23 -1.11 -0.52 -0.65 -0.22 -0.21 -0.39 -0.43 -0.12 -2.4 -1.93 -2.56 -2.78 -1.81 -2.69 -1.64 -1.96 -2.34 -2.06 -3.72 -1.82 -3.12 -1.94 -3.3 -2.34 -3.56 -2.5 -2.18 -1.71 -2.76 -2.33 -5.34 -2.07 -3.31 -1.68
-6.33 - -3.45 - -1.23 -0.03 -0.39 -1.76 2.51 2.2 3.12 1.99 -0.69 0.61 1.21 1.12 3.79 3.95 - -4.26 - -4.0 -2.7 -1.71 -3.8 -5.47 -4.52 -3.91 - - - - - -5.08 - - - - - - - - - - -0.11 -5.22 - - -3.36 -3.73 - -3.53 -1.19 -0.94 -3.35 -5.62 -2.99 -5.58 - -5.09 -1.06 -0.11 -0.77 0.19 -3.09 -2.63 - 0.42 -3.98 -1.09
-6.4 - -2.55 -3.73 -0.87 -4.09 -4.03 - 3.75 3.66 3.08 2.69 -3.65 - - - 4.08 3.38 - -6.0 -4.91 - -3.85 -7.1 -5.65 -4.92 -4.6 -3.49 -8.16 -8.51 -7.06 -7.19 -6.2 -6.81 -5.42 -5.06 - - -8.25 - -7.36 -6.95 -5.76 -6.57 - - - - - - - - - -8.29 - -8.26 -8.46 - - - - - - -7.81 -7.19 -5.51 - - - -
-4.17 - 2.21 0.32 2.99 -0.96 -1.21 -6.15 2.92 1.6 0.54 -0.45 2.98 3.11 1.32 1.04 2.46 2.6 -2.0 0.87 - 1.38 -2.85 -1.46 -0.97 -2.63 -4.07 -4.52 -2.37 -2.68 -2.45 -2.12 -1.29 -2.31 -4.03 -2.7 -2.09 -2.45 -2.83 -5.11 -1.3 -1.47 -1.74 -3.46 -5.82 - - - -3.72 - -6.03 - -4.2 - - - -3.6 -3.95 - - -4.11 - - - - -5.66 -5.19 - -6.06 -4.85
-1.75 -1.38 -1.07 1.25 0.89 -0.62 -1.13 - 0.79 0.81 1.45 1.85 0.95 1.6 1.28 1.88 1.14 1.39 -0.69 0.57 -0.93 -0.01 0.03 0.5 -0.74 -0.2 -0.48 -0.09 -0.41 0.06 -0.51 -0.06 -0.66 -0.44 -0.28 -0.34 -0.04 0.17 -0.2 -0.27 0.82 0.09 0.26 0.44 -0.2 -0.19 -1.76 -1.68 -0.47 -0.48 -1.72 -1.2 -0.2 -0.01 -1.43 -1.52 -1.26 -0.77 -2.76 -2.27 0.13 0.06 -0.34 -1.1 - -0.98 -3.36 -2.62 -1.59 -5.98
- - - - - - - - 3.69 2.96 5.04 3.7 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.14 - - - - - - - - - - - -0.05 - - 0.35 - - - - - - - - - -
- - - - 1.01 - - - - - - - - - - -0.03 4.3 3.88 -1.3 -0.05 -1.41 - - - 0.76 0.57 1.41 1.55 0.41 0.49 0.5 1.45 -1.86 0.59 1.05 0.69 -0.82 -0.03 0.41 -1.12 0.3 0.26 -1.04 -0.22 - - - - -1.88 - - - -1.55 - -2.01 -2.29 - - - - -0.97 -1.7 -1.57 - - - -1.18 - - -
-3.86 -1.97 - -0.85 - - - -2.07 - - - - 2.86 2.6 2.7 1.25 4.13 4.31 - - - - - - - - - - - - - - -3.66 -3.59 - - -1.0 -1.47 -1.88 -0.99 -0.4 -0.94 -0.56 0.34 - -3.43 -1.35 1.4 -2.84 - - - - - - - - -3.5 - -3.3 - -3.23 - -3.29 -3.54 - -2.86 -1.22 - -
-2.57 -1.83 0.59 0.4 -0.06 -0.27 -0.34 -0.49 0.82 0.45 0.72 0.8 0.67 0.51 0.28 0.32 0.54 0.7 0.06 0.82 0.32 0.21 0.98 0.89 -0.77 -0.63 -0.52 -0.27 -0.87 -0.41 -0.44 -0.37 -0.79 -0.25 -0.31 0.11 -0.74 -0.71 -0.37 -0.26 -0.75 -0.51 -0.43 0.08 0.34 0.17 -0.38 -0.08 0.08 0.04 -0.58 0.22 0.32 0.12 -0.38 0.06 0.06 -0.28 -0.37 0.18 0.36 0.35 -0.21 0.26 -1.36 0.32 -1.04 -0.91 -0.46 -0.74
-5.22 -1.24 2.23 2.81 0.01 -5.41 -6.95 - 2.44 2.26 2.08 1.88 2.15 1.95 1.91 1.98 2.09 2.08 -0.39 -0.33 1.23 -1.19 -0.66 -0.32 -1.55 -1.56 -1.7 -1.07 -1.74 -1.65 -1.15 -1.07 -2.14 -2.16 -1.59 -0.86 -1.26 -1.09 -1.14 -0.81 -1.63 -2.05 -1.67 -1.7 -6.34 - - -4.66 -4.75 -5.47 -6.43 -3.79 -4.16 -3.83 -4.03 -6.53 -6.07 -6.47 -4.83 -4.07 - -6.1 - -6.26 -3.78 -4.21 -5.84 -3.29 -3.25 -4.17
-0.39 -3.9 -3.95 -4.15 -3.25 -7.55 -5.79 -4.04 -4.78 0.17 0.81 -0.43 3.54 2.58 1.01 0.56 4.34 3.85 -1.9 -0.63 -5.32 - - - -1.29 -1.73 -1.23 -1.75 -1.23 -0.7 -0.34 -0.28 -2.0 -1.3 -1.68 -1.07 - - -6.69 - -7.28 -6.93 - - -5.06 - -6.81 - 0.44 - - - -4.63 - - - -0.21 -4.73 -4.81 -4.98 -2.62 -2.17 -2.84 -4.63 - -7.17 - - -5.4 -
- - - - - - - - - - - - - - - 3.69 - 3.21 - 3.65 - - - - - - - - - - - 0.09 - - - - - - - - - -0.53 -0.62 -0.7 - - - - - - - - - - - - 2.52 1.18 2.43 3.79 - - - - - 1.94 - - 0.28 -
- - - - - - 1.24 - - - - - - - - - 4.56 4.89 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.08 - - - - - - - 1.15 - - - 1.23 1.69 - - - - - - - 2.18 - - - -
- - 1.92 0.54 0.54 -4.01 -3.55 - 2.27 2.68 2.14 2.24 2.1 2.45 2.56 2.3 2.19 2.2 -1.89 2.05 -4.67 1.08 -1.12 - -1.18 -3.23 -4.1 -3.03 -1.26 -1.6 -1.63 -3.22 -3.02 -2.2 - -4.22 -1.45 -1.28 -1.1 - -1.49 -2.12 -1.57 -2.33 -2.06 -4.19 - - -5.41 -5.02 -4.21 - -4.65 - -2.78 - -3.13 -4.21 - -3.85 -2.29 -2.71 - - -5.23 -3.36 - - -4.76 -
-4.62 - - - - 0.76 1.43 - 2.63 1.93 3.23 -0.3 3.01 2.18 2.15 2.1 3.88 3.22 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.99 - - -5.27 -
-4.03 - - 0.33 -1.7 -4.13 - - - 5.81 2.69 - - - - - - - - - -3.11 - - - -3.55 -2.65 -2.52 -2.36 - - - - - - - - - - - - -3.03 - -2.69 -3.76 - -3.75 - - -3.58 - - - - - - - 2.14 -3.84 - -3.33 - - - - - - - - - -
- - - - - 1.63 1.18 - 2.23 3.36 2.84 1.82 3.32 2.23 3.09 2.34 - 0.58 -0.4 - - - - - -1.19 -2.28 - -1.59 0.62 -0.29 -0.36 -1.41 -1.2 - - -0.03 - -1.19 - - 0.17 -0.61 -2.31 -2.28 - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.07 -0.9 1.31 1.62 0.19 - -4.85 -4.52 -2.28 4.36 5.2 - -2.74 - - - - 0.37 - - - - - - - - -5.4 -4.42 - - - - -3.26 -1.35 -0.26 -1.41 -2.37 -3.37 -1.46 -1.39 - - - -4.47 - - - - - - - - - - - -4.7 - - - -4.17 - - - -1.53 - -5.67 - -3.69 - -
-2.3 -1.7 0.2 -0.18 0.4 0.36 0.16 -1.29 0.78 0.76 0.62 0.1 1.51 1.34 1.13 0.79 0.96 0.85 -0.46 -0.11 -0.35 0.74 0.43 0.37 -0.17 -0.03 -0.13 0.31 -0.13 0.13 0.27 0.14 -0.06 0.08 0.23 0.25 0.08 -0.18 -0.01 -0.14 0.05 0.22 -0.02 0.04 -0.24 -1.13 -0.51 -0.04 -0.81 -1.34 -1.43 -0.23 -0.17 -0.77 -0.74 -1.14 -0.58 -0.99 -1.1 -0.83 -0.28 -1.14 -0.64 -0.01 -0.33 0.3 -1.97 -1.77 -0.71 -0.42
- - - - - - - - - 4.67 - - 4.33 - - - - - - - - - - - - - - 2.65 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.18 -
-1.88 - - - -1.27 -0.85 -1.05 -3.54 3.77 3.04 3.89 - - -1.26 -1.23 - 3.83 3.37 - - - - - - - - - -2.75 - - -3.38 -0.94 -2.37 -2.42 -1.82 -1.97 -3.11 - -3.4 -3.35 -3.66 -2.34 - -1.7 -2.22 - - - 0.0 -1.79 -3.56 - -1.94 -3.44 - -3.82 - - -3.2 - -1.61 -3.08 -2.96 -1.43 -3.91 -2.73 - -2.67 - -
- - - - - - - - - 4.36 5.61 - - - - - - - - - - - - - - - -1.85 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.39 - - - - - - - -2.68 - - - - -
-4.95 - - - -1.21 - - - 0.54 2.18 4.66 3.83 0.5 -0.09 0.54 0.39 1.8 1.61 - 1.46 -1.04 - -0.78 -2.09 -0.93 -3.37 -1.89 -1.81 - - - -2.41 -1.23 -0.42 -0.54 -0.75 -3.23 -3.22 - -2.26 - - - - -1.85 - - - -2.3 -0.82 -3.26 -3.46 - - - - - -2.11 - - - - - - - 1.29 - - -2.22 -
-1.83 - - - - 1.3 2.01 -4.53 3.44 4.49 3.11 0.31 2.15 1.66 -2.29 -0.11 1.66 2.44 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.44 - - - -
- 2.9 - - - 2.63 1.54 - - - - 3.88 - - 3.11 2.95 2.72 - - - - - - - - - - 1.26 - - - 1.28 - - - - - - - - - 0.77 - - - 1.98 - - - - - - - - - - - - 0.84 - - - - - - - 1.81 - - -
-1.69 -0.78 0.99 0.66 0.71 -0.46 -0.36 -3.44 0.31 0.85 1.02 0.58 1.08 0.91 0.93 1.02 0.66 0.74 -0.02 0.4 0.39 0.36 0.69 0.66 -0.37 -0.35 -0.29 0.26 -0.42 -0.23 -0.1 -0.02 -0.47 -0.28 -0.26 -0.07 -0.21 -0.24 -0.17 0.03 -0.4 -0.44 -0.13 -0.06 -0.08 -0.27 -0.59 -0.48 -0.03 -0.3 -0.51 -0.66 0.09 0.13 -0.42 -0.34 -0.0 -0.15 -0.52 -0.5 -0.04 -0.18 -0.44 -0.45 -0.99 -0.67 -1.85 -1.98 -1.29 -1.31
- - - - - 1.54 1.6 - 3.18 -0.9 3.03 -0.42 2.46 1.66 2.48 1.83 4.25 3.05 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.35 - - - - - - - - -3.14 - - - - - - - -3.73 - - - -2.51
-3.97 -2.84 -0.66 -0.01 -0.37 -4.32 -5.23 - 2.39 2.45 2.21 0.78 2.48 2.57 2.21 2.26 0.32 -0.25 1.72 2.42 1.7 0.24 0.22 0.22 -1.37 -1.61 -1.86 -1.73 0.12 0.13 0.4 0.38 - -8.69 -7.07 -7.63 -0.39 -0.45 -0.57 -0.54 -1.33 -1.52 -1.53 -1.26 -5.26 -4.56 -5.26 -5.47 -5.06 -4.7 -5.36 -4.56 -3.9 -3.77 -4.3 -5.18 -4.21 -4.51 -5.99 -5.2 -2.94 -3.25 -2.84 -4.0 -3.88 -3.48 -5.9 -5.61 -4.28 -4.67
- - -0.44 - - -0.65 -0.41 - 2.73 0.59 2.12 3.19 1.02 -0.28 0.74 1.58 4.16 3.81 - - 1.74 - - - - - - -1.26 - -1.3 -1.14 - - -2.16 - - - - -2.13 -1.36 - - - -1.25 - - - - - - - - - - - - - - - -2.17 - - - -0.37 - - - - - -
-4.73 -6.3 0.97 0.91 1.47 -5.8 -5.07 -6.27 1.38 1.2 1.31 1.86 1.72 1.46 1.74 1.59 1.59 1.47 1.34 1.86 1.14 0.34 0.83 0.49 -0.13 -0.19 -0.49 -0.6 0.21 0.32 0.2 0.11 0.04 -0.07 -0.33 -0.59 0.21 0.2 0.31 0.13 -0.08 0.18 0.13 0.38 -3.8 -4.67 -4.65 -5.34 -4.4 -4.47 -4.89 -4.95 -3.81 -4.71 -6.22 -5.03 -4.13 -4.2 -6.14 -5.81 -4.24 -3.59 -4.29 -3.71 -8.58 -5.81 - -7.64 -6.31 -
-4.04 - -0.35 - 3.02 0.2 0.55 -3.47 3.27 1.68 0.91 1.11 1.71 3.1 - - 2.44 3.05 -2.61 0.95 - -1.2 - - - - -1.52 -1.99 -2.24 - - - - - - - - - - - -1.82 - -3.31 - -0.2 -0.27 - - 0.7 -1.18 - - -0.01 0.35 - - -0.78 0.04 - - 1.21 0.21 - - -3.84 -0.04 - - - -
-4.29 - - - 0.85 -2.85 -1.45 - 2.51 2.96 2.97 0.52 2.37 1.79 1.52 0.99 3.26 3.16 - -1.41 - - - - -3.64 -2.89 -2.6 -2.38 - - - - - - - - - - - - -4.06 -4.0 -1.78 -3.79 0.62 - - - - - - - -2.79 -3.85 - - -2.23 -0.62 - - -0.07 1.71 -2.26 - - - -3.12 - - 2.08
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.